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The map label for this gene is ubiX [C]

Identifier: 94984290

GI number: 94984290

Start: 171315

End: 171911

Strand: Reverse

Name: ubiX [C]

Synonym: Dgeo_0182

Alternate gene names: 94984290

Gene position: 171911-171315 (Counterclockwise)

Preceding gene: 94984291

Following gene: 94984289

Centisome position: 6.97

GC content: 67.34

Gene sequence:

>597_bases
ATGCAGCCCACCCCCCCTTCTGCTAGGCTGCGCCGCATGCGGTTGGTGGTGGGTGTAAGCGGCGGAAGCGGCATTCCCTA
CGCGCTGTCGGTGCTGCGGGCGCTGAGGGCACTGCATGTGGAGACCCACCTGATTGTCACCAGCGGCGCCAAGCGCGTGA
TGACGGCAGAAGGCGGCCCGCAGCTCAAGGATCTGACCGCACTCGCTACCGTCACGCACGACGACCGCGATCTCGCCGCG
AGTGTCGCCAGCGGTTCCTTTCGCACAGACGGCATGCTGGTCGTGCCGTGCAGCGCCGGGACGCTGGCGAAGGTGGCAGG
GGGCTTTGCAGACACGCTGCTTAGCCGCGCCGCGCACGTGACACTCAAGGAACGGCGGCGGCTGGTGCTCGTGCTGCGCG
AGGATCCCCTCTCGCGTCCGGTGTTGACCAACCTGCTCGCCGCCTTTGATGCGGGAGCGACGGTCATGACGGCCAGCCCT
GGCTTTTATCACGCGCCTCAAACTGTCGAAGAGCTGCTGCACTTCGTCACGGCGCGGGTGCTCGATCAGTTCGGGCTGGA
TGCGCCGGCGTTCCGGCGCTGGAAGGAGGAGGCGTGA

Upstream 100 bases:

>100_bases
AAGGCACCGTCCGCAACTATCTCTCGGAAGCCATCAGCAAGCTGGGCTGCGAGAACCGCATCGAGGCGGCCCGCAAGGCG
CGCGAGCAAGGCTGGCTCTG

Downstream 100 bases:

>100_bases
CCAGCGTCTGCTTCCTGGCCGGCCGCACCGCCGCCCTGATTCCCGCTGCCGGGTCCGGTACCCGCCTGGGCCGCGGGCCC
AAGGCCTTTGTCGAGGTGGC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MQPTPPSARLRRMRLVVGVSGGSGIPYALSVLRALRALHVETHLIVTSGAKRVMTAEGGPQLKDLTALATVTHDDRDLAA
SVASGSFRTDGMLVVPCSAGTLAKVAGGFADTLLSRAAHVTLKERRRLVLVLREDPLSRPVLTNLLAAFDAGATVMTASP
GFYHAPQTVEELLHFVTARVLDQFGLDAPAFRRWKEEA

Sequences:

>Translated_198_residues
MQPTPPSARLRRMRLVVGVSGGSGIPYALSVLRALRALHVETHLIVTSGAKRVMTAEGGPQLKDLTALATVTHDDRDLAA
SVASGSFRTDGMLVVPCSAGTLAKVAGGFADTLLSRAAHVTLKERRRLVLVLREDPLSRPVLTNLLAAFDAGATVMTASP
GFYHAPQTVEELLHFVTARVLDQFGLDAPAFRRWKEEA
>Mature_198_residues
MQPTPPSARLRRMRLVVGVSGGSGIPYALSVLRALRALHVETHLIVTSGAKRVMTAEGGPQLKDLTALATVTHDDRDLAA
SVASGSFRTDGMLVVPCSAGTLAKVAGGFADTLLSRAAHVTLKERRRLVLVLREDPLSRPVLTNLLAAFDAGATVMTASP
GFYHAPQTVEELLHFVTARVLDQFGLDAPAFRRWKEEA

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=185, Percent_Identity=44.8648648648649, Blast_Score=162, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6320746, Length=192, Percent_Identity=41.1458333333333, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21176; Mature: 21176

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTPPSARLRRMRLVVGVSGGSGIPYALSVLRALRALHVETHLIVTSGAKRVMTAEGGP
CCCCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCC
QLKDLTALATVTHDDRDLAASVASGSFRTDGMLVVPCSAGTLAKVAGGFADTLLSRAAHV
CHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
TLKERRRLVLVLREDPLSRPVLTNLLAAFDAGATVMTASPGFYHAPQTVEELLHFVTARV
HHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
LDQFGLDAPAFRRWKEEA
HHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MQPTPPSARLRRMRLVVGVSGGSGIPYALSVLRALRALHVETHLIVTSGAKRVMTAEGGP
CCCCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCC
QLKDLTALATVTHDDRDLAASVASGSFRTDGMLVVPCSAGTLAKVAGGFADTLLSRAAHV
CHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
TLKERRRLVLVLREDPLSRPVLTNLLAAFDAGATVMTASPGFYHAPQTVEELLHFVTARV
HHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
LDQFGLDAPAFRRWKEEA
HHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]