| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is crcB1
Identifier: 94984257
GI number: 94984257
Start: 139707
End: 140087
Strand: Reverse
Name: crcB1
Synonym: Dgeo_0149
Alternate gene names: 94984257
Gene position: 140087-139707 (Counterclockwise)
Preceding gene: 94984259
Following gene: 94984256
Centisome position: 5.68
GC content: 69.55
Gene sequence:
>381_bases ATGAAGGCGGGCCTCTGGCTGTGGCTGATGTTGGGCGGTGCCGTGGGCGCAGTGTGCCGTCAGGGCGTCGTGCTGGCTCT CGCACCGCTGGTCGCGCGCCTGGGCTTTCCGGTGGCCGTCCTGGGCATCAACGTGCTGGGTTCCTTTCTGCTGGGCCTGA CGCTGGCACTGGCCGGGCGCGGTGTGTGGCCGCCAGAAGTGCGCGTGGCCTTTGGAACAGGTGTGCTGGGCGCCTTTACC ACCTTTTCCACCTTCAGCACCGAACTCGACGAGCTGCTGGGGCGCGGCGCGGTGGGCCTGGCAGCGCTGTACGCCGGACT GAGTGTGGGGCTAGGCCTGCTGGCGGCAGTCGCAGGTCGCCTGCTGGGGACGCGGCTGTGA
Upstream 100 bases:
>100_bases AAAGTGCTGGGGGGGAAACGGTGGTCGGCCGCCGGCTCCTCCTCCCTCTGCCCATCCACCTCCCTCTGCCCATCCACGAC TTCCGACTATTCTGTTCGCC
Downstream 100 bases:
>100_bases CGGGGCGGGGGCGCAAGCGGACGGAGGTGACGCGGACACCGGAACACTTCCTGGACCTCGCGGACGTGCTGGTCTACGTA GGTCAGGTGATCGCGCGGGG
Product: crcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGRGVWPPEVRVAFGTGVLGAFT TFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGRLLGTRL
Sequences:
>Translated_126_residues MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGRGVWPPEVRVAFGTGVLGAFT TFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGRLLGTRL >Mature_126_residues MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGRGVWPPEVRVAFGTGVLGAFT TFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGRLLGTRL
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB1_DEIGD (Q1J232)
Other databases:
- EMBL: CP000359 - RefSeq: YP_603621.1 - STRING: Q1J232 - GeneID: 4057349 - GenomeReviews: CP000359_GR - KEGG: dge:Dgeo_0149 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: EITIAIL - ProtClustDB: CLSK444403 - BioCyc: DGEO319795:DGEO_0149-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 12702; Mature: 12702
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15daf1e8)-; HASH(0x170e3564)-; HASH(0x16b6c5b4)-; HASH(0x1704137c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC GVWPPEVRVAFGTGVLGAFTTFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGR CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLGTRL HHHCCH >Mature Secondary Structure MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC GVWPPEVRVAFGTGVLGAFTTFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGR CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLGTRL HHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA