Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is crcB1

Identifier: 94984257

GI number: 94984257

Start: 139707

End: 140087

Strand: Reverse

Name: crcB1

Synonym: Dgeo_0149

Alternate gene names: 94984257

Gene position: 140087-139707 (Counterclockwise)

Preceding gene: 94984259

Following gene: 94984256

Centisome position: 5.68

GC content: 69.55

Gene sequence:

>381_bases
ATGAAGGCGGGCCTCTGGCTGTGGCTGATGTTGGGCGGTGCCGTGGGCGCAGTGTGCCGTCAGGGCGTCGTGCTGGCTCT
CGCACCGCTGGTCGCGCGCCTGGGCTTTCCGGTGGCCGTCCTGGGCATCAACGTGCTGGGTTCCTTTCTGCTGGGCCTGA
CGCTGGCACTGGCCGGGCGCGGTGTGTGGCCGCCAGAAGTGCGCGTGGCCTTTGGAACAGGTGTGCTGGGCGCCTTTACC
ACCTTTTCCACCTTCAGCACCGAACTCGACGAGCTGCTGGGGCGCGGCGCGGTGGGCCTGGCAGCGCTGTACGCCGGACT
GAGTGTGGGGCTAGGCCTGCTGGCGGCAGTCGCAGGTCGCCTGCTGGGGACGCGGCTGTGA

Upstream 100 bases:

>100_bases
AAAGTGCTGGGGGGGAAACGGTGGTCGGCCGCCGGCTCCTCCTCCCTCTGCCCATCCACCTCCCTCTGCCCATCCACGAC
TTCCGACTATTCTGTTCGCC

Downstream 100 bases:

>100_bases
CGGGGCGGGGGCGCAAGCGGACGGAGGTGACGCGGACACCGGAACACTTCCTGGACCTCGCGGACGTGCTGGTCTACGTA
GGTCAGGTGATCGCGCGGGG

Product: crcB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGRGVWPPEVRVAFGTGVLGAFT
TFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGRLLGTRL

Sequences:

>Translated_126_residues
MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGRGVWPPEVRVAFGTGVLGAFT
TFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGRLLGTRL
>Mature_126_residues
MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGRGVWPPEVRVAFGTGVLGAFT
TFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGRLLGTRL

Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CRCB1_DEIGD (Q1J232)

Other databases:

- EMBL:   CP000359
- RefSeq:   YP_603621.1
- STRING:   Q1J232
- GeneID:   4057349
- GenomeReviews:   CP000359_GR
- KEGG:   dge:Dgeo_0149
- eggNOG:   COG0239
- HOGENOM:   HBG753179
- OMA:   EITIAIL
- ProtClustDB:   CLSK444403
- BioCyc:   DGEO319795:DGEO_0149-MONOMER
- HAMAP:   MF_00454
- InterPro:   IPR003691
- TIGRFAMs:   TIGR00494

Pfam domain/function: PF02537 CRCB

EC number: NA

Molecular weight: Translated: 12702; Mature: 12702

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15daf1e8)-; HASH(0x170e3564)-; HASH(0x16b6c5b4)-; HASH(0x1704137c)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
GVWPPEVRVAFGTGVLGAFTTFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGR
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLGTRL
HHHCCH
>Mature Secondary Structure
MKAGLWLWLMLGGAVGAVCRQGVVLALAPLVARLGFPVAVLGINVLGSFLLGLTLALAGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
GVWPPEVRVAFGTGVLGAFTTFSTFSTELDELLGRGAVGLAALYAGLSVGLGLLAAVAGR
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLGTRL
HHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA