| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is tas [C]
Identifier: 94972156
GI number: 94972156
Start: 342183
End: 342614
Strand: Direct
Name: tas [C]
Synonym: Dgeo_2689
Alternate gene names: 94972156
Gene position: 342183-342614 (Clockwise)
Preceding gene: 94972157
Following gene: 94972155
Centisome position: 59.6
GC content: 62.96
Gene sequence:
>432_bases ATGCCGGTATGCCCACCGGAGGAACGAATGACCATTTACCGCAAACTGGGCCGCAGCGGGTTGCATCTTTTTCCCATCGG ACTGGGCAGCATGCAGATCGGCTGGTCCGCTGACGAACAGACCGCCTTTGACATCCTGGACGCCTACTTTGGGGCAGGTG GGAACTTCATCGACACCGCCGACATCTACACGACCTGGACCCCAGGTAACCCCGGCGGCGTCTCCGAGGCGATCATTGGG CGCTGGATGAAGTCCCGAGGAAACCGTCGGGATCTCGTGATCGCGACCAAGGTTCGCGGCCCGATGGGCGAGTTCGGCCG TGACGGGAGAAAGAGCATTCACCAGCGCGAGGGTCTCTCGCGGCGCTGGATGCTGCAGGCCTGCGAGGACAGCCTGCGGC GGCTGGGGGTGGACCATATCGACCTCTACTAG
Upstream 100 bases:
>100_bases TCGTGACGAACGTGCTGTGGCTGCCCCAGCCGTGGGCGGGGCAGGGGGTTTTCGACTCACCCTGCAAGGCACGTCCTGAT GGTTGGCGGTGACCGCCTGA
Downstream 100 bases:
>100_bases GCGTACTGGGTGGACAACCAGACCCCCATTGAGGAGACGCTGGCAGCGTTGACCGAACTCGTGCGGCGCGGCGCTTCAGC GACAAGAACTTCGACATCGT
Product: putative oxidoreductase transmembrane protein
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPVCPPEERMTIYRKLGRSGLHLFPIGLGSMQIGWSADEQTAFDILDAYFGAGGNFIDTADIYTTWTPGNPGGVSEAIIG RWMKSRGNRRDLVIATKVRGPMGEFGRDGRKSIHQREGLSRRWMLQACEDSLRRLGVDHIDLY
Sequences:
>Translated_143_residues MPVCPPEERMTIYRKLGRSGLHLFPIGLGSMQIGWSADEQTAFDILDAYFGAGGNFIDTADIYTTWTPGNPGGVSEAIIG RWMKSRGNRRDLVIATKVRGPMGEFGRDGRKSIHQREGLSRRWMLQACEDSLRRLGVDHIDLY >Mature_142_residues PVCPPEERMTIYRKLGRSGLHLFPIGLGSMQIGWSADEQTAFDILDAYFGAGGNFIDTADIYTTWTPGNPGGVSEAIIGR WMKSRGNRRDLVIATKVRGPMGEFGRDGRKSIHQREGLSRRWMLQACEDSLRRLGVDHIDLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504825, Length=139, Percent_Identity=30.9352517985612, Blast_Score=63, Evalue=1e-10, Organism=Escherichia coli, GI1789199, Length=131, Percent_Identity=35.1145038167939, Blast_Score=86, Evalue=9e-19, Organism=Escherichia coli, GI87081735, Length=138, Percent_Identity=34.0579710144928, Blast_Score=73, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6321052, Length=149, Percent_Identity=38.255033557047, Blast_Score=76, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323998, Length=149, Percent_Identity=36.241610738255, Blast_Score=72, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319958, Length=107, Percent_Identity=40.1869158878505, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 16044; Mature: 15912
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVCPPEERMTIYRKLGRSGLHLFPIGLGSMQIGWSADEQTAFDILDAYFGAGGNFIDTA CCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCCCEECC DIYTTWTPGNPGGVSEAIIGRWMKSRGNRRDLVIATKVRGPMGEFGRDGRKSIHQREGLS CCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCC RRWMLQACEDSLRRLGVDHIDLY HHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure PVCPPEERMTIYRKLGRSGLHLFPIGLGSMQIGWSADEQTAFDILDAYFGAGGNFIDTA CCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCCCEECC DIYTTWTPGNPGGVSEAIIGRWMKSRGNRRDLVIATKVRGPMGEFGRDGRKSIHQREGLS CCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCC RRWMLQACEDSLRRLGVDHIDLY HHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7808389 [H]