Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94972112

Identifier: 94972112

GI number: 94972112

Start: 393348

End: 395807

Strand: Direct

Name: 94972112

Synonym: Dgeo_2645

Alternate gene names: NA

Gene position: 393348-395807 (Clockwise)

Preceding gene: 94972132

Following gene: 94972110

Centisome position: 68.51

GC content: 66.5

Gene sequence:

>2460_bases
GTGTTAACCATTCACCTTCTGGGACATGCACACATCAGCCGCCACAATCAACCTGTGCCGGTTTCGGCCAAAGCGGTTGC
CCTGATCGCCTACCTCGCCATCGAGAAGTTGCCCCAACACCGGGAACGGCTGGCAGACCTGCTCTGGACCACCGCCGAAG
CCCGCAAGAATCTGCGCGTCGAACTGGCCCGCATCCGCACGGCGGGTCTGAATCTCTTTCCAGCCAGCCGCCAGCTGCTC
TACCTCGAAGACGTGACCACCGACGTTGAGCTGTGGCAGGCGCGCCTTGGCGAAGACATGAACCAAGCCGCGCTGGCCGA
GTGGCTGGCCATGTTGCGCGGCTTTCCGCTCAGCGGCCTGGAGGATCTAGGCAGCTCCAGCTTTCAGGAATGGGTGGATC
AGCAACGCTGGCTTCTTAGCCAGCAGATCGAGGAGGGCCTCAGTCAGGTGTACTGGCGCTACGCCCGCGCCGGACAAACC
TGGGCCATGCGGCTGATTTCGGCACGCGCCGAGACGCTGGGCTTCGAGCTGAGTGCGGAGCCGCCCACCGAACTGCACCT
TCCCGATCCTGAATTGCCCCCCACCTCAGCGGGGCCGGCACATCCGCTGAAGCAGATACACTTTGAACGGCGGCACGAGG
AGCAAGAACTTCAGCGTCTCTTCCAGGCGGCTGAGCAGGCCGTGCAGGTGGTGGTCCTGCACGGCCCGCCTGGCGCAGGC
AAGAACTACCTCACCGAGCGCTTGGCGAGCCGTGCAGGGTGGCTGACCCTGCGGGTCTCTGACACCCGGTCAAGCCGCCT
GGTCTTGGCCACGCTCGCGCAGGCGATCTTGCGGGAGAGCGATCCAGAATGCGCTGCGGCGCTGCGGCGTATGCTGCTGG
CCCCCAACAGCCTGGAAGAAGACACCGTGAAAGTGGCGGTCGCGCTGGCACGGCTTGCCCGCCCAGTGCTGCTGCTCTTC
GACCACGCCCACACGGCCCCCGCCGAACTTGCGCCGCTGCTCGCGTTCCTGACCCAGATGCCCAGTGAGGGGCCGCGCAT
CTTTCTGCTGCTCAGCCGCCAGCATCCCATGCAGGCGCCGCTCACGCGTGCGCTGTGGGGCTGGAGCGAGGGCAACCTCA
CCGAACTCGCCCTGCGGCCCCTCACAACAACCAGCGTCCAACGCGCGCTTGAGGCGTATTTTCCCTCGGATCGCTCGCGC
CGCCTGCACAGCGACGCTGCCCGGTTGGTGCAGCGCAGCGAAGGCAACCCACTCCACCTGCTCAGTCTGTTGGGCCAGAC
AGGGGAAACTGGAGCCAGCCTGTCGATGACTCTGCCCCAGATCCACTTCCCACAGGTGATGCGCGACACGTACGGCATGG
AGATCGATCAGTGGCCGGCCCCTCTCGTCGAGGGGATGATCCGCCTCAGCGCTATCTACGGCCATTTTGACCGCCGACTG
GCCCAGGCGGCCCTGGGTGAACCGCTGGCGAGCGCCGTCGATCCCTTGCTGTACGAGGCCCTCGAACGGCACATCCTGGA
GGAGGTGGAGGAGGAGGGGGGGCTACAGCTGCCCGGCCTCACCCCGCTGCCCAACCCACCAGGGGGCGAGACCCGCTACA
CCTTTGCCAGCGAGGGCCTGCGCATCGCGCTCGCCAGTCGCTCGCCCCAGCTTTTGCGACAAGACGTGCGGCGGCGCTTG
GTGCCGGTGCTGGCGCCTGACGCACCTGGCCTGGCGGCCTACTACGCCCAGCGCGGCGGGCTGATCGAGGAGGCCGAGCG
CTTACAGCGAGTCTACCGTGCTCAGCGCCAAGCCCGGCAGCTGCCGGAAGCTGGGCAGACGGATGACCTGCCGCCCCCGG
CTGTTGCTGAACCCCGGCGGGTTCCTGCGGCCCAGCGGGGACCCGTGCTGTGCCAGGGATATTTGGTCTCCTGCGACGAG
CAGAGCTGGCTCAACATCTGCAGTGTCGGGCGCTACGGGCATCCCCAGACCCTCCGGCTCCTCCTCAAGCTGCCCAAGAC
CCCCGCCCATCAGGCCGAGCTGCGCCTGGTCTGGCGCCTCGATGTCTTTAGTGGCGGTGAGGAACTCGGCCCAGCCCGCA
CCCCCTTTCCGCTGCGGGTGGCCCTACAGGGTGCCAACACCGCCTATGTGCTGGCCCGCAGCGCCACGCCCGACTATCTG
GAAGACGGCGTCCGCCATGTCGTTCATCCGGCGGCCGGTTTGGGGCAGTGGACCGAACACCGCCTCACGTTCCCGGCCAG
TGGCGAGGAGCAGACTCTGGAGCTGAGCGTACGTGCTCTCGATGTGGCCTTGACGCTGGGCGCCCTGAGCTGGCAGGGCC
AAGCACTGCTGCCGTTCGCGGCGCACCCAACGCAGGAGCTGATCCGCCCGTCTCCCCACTCGACATTCGATTGGCACAGT
AATCGAGGAGTCGTAATCAGGGATTCGCACGAATCAGGAATTCATAGACGCCAGTCATAG

Upstream 100 bases:

>100_bases
CGAAGTTGCACTTGATCCAAAGGTTCGCCTGTGCCGGAGACCGCTGGTCCTCACGCTGTGCGGAGAAAAGTTCAGGACAC
AGGACGGATGGAGGCCAAGG

Downstream 100 bases:

>100_bases
AAAAGAAGCAGGAAGCGGAGCAACAGAACGTTGCCCTCCACCTCCTGCTTCTTCAAGCTGCGACTTAGGGGCCGACCTTA
ACGCCCGCCGAGGCCAGCTT

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 819; Mature: 819

Protein sequence:

>819_residues
MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRVELARIRTAGLNLFPASRQLL
YLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGLEDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQT
WAMRLISARAETLGFELSAEPPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG
KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEEDTVKVAVALARLARPVLLLF
DHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAPLTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSR
RLHSDAARLVQRSEGNPLHLLSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL
AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGLRIALASRSPQLLRQDVRRRL
VPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQLPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDE
QSWLNICSVGRYGHPQTLRLLLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL
EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFAAHPTQELIRPSPHSTFDWHS
NRGVVIRDSHESGIHRRQS

Sequences:

>Translated_819_residues
MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRVELARIRTAGLNLFPASRQLL
YLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGLEDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQT
WAMRLISARAETLGFELSAEPPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG
KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEEDTVKVAVALARLARPVLLLF
DHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAPLTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSR
RLHSDAARLVQRSEGNPLHLLSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL
AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGLRIALASRSPQLLRQDVRRRL
VPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQLPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDE
QSWLNICSVGRYGHPQTLRLLLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL
EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFAAHPTQELIRPSPHSTFDWHS
NRGVVIRDSHESGIHRRQS
>Mature_819_residues
MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRVELARIRTAGLNLFPASRQLL
YLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGLEDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQT
WAMRLISARAETLGFELSAEPPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG
KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEEDTVKVAVALARLARPVLLLF
DHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAPLTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSR
RLHSDAARLVQRSEGNPLHLLSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL
AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGLRIALASRSPQLLRQDVRRRL
VPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQLPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDE
QSWLNICSVGRYGHPQTLRLLLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL
EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFAAHPTQELIRPSPHSTFDWHS
NRGVVIRDSHESGIHRRQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91006; Mature: 91006

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRV
CEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
ELARIRTAGLNLFPASRQLLYLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGL
HHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH
EDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQTWAMRLISARAETLGFELSAE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEECCC
PPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEEECCCCCC
KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEE
HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
DTVKVAVALARLARPVLLLFDHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAP
HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH
LTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSRRLHSDAARLVQRSEGNPLHL
HHHHHHCCCCCCEEHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
LSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL
HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCE
RIALASRSPQLLRQDVRRRLVPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQ
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDEQSWLNICSVGRYGHPQTLRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEECCCHHHHHHHHCCCCCCHHHHHH
LLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL
HHHCCCCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHH
EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFA
HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
AHPTQELIRPSPHSTFDWHSNRGVVIRDSHESGIHRRQS
CCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRV
CEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
ELARIRTAGLNLFPASRQLLYLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGL
HHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH
EDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQTWAMRLISARAETLGFELSAE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEECCC
PPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEEECCCCCC
KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEE
HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
DTVKVAVALARLARPVLLLFDHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAP
HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH
LTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSRRLHSDAARLVQRSEGNPLHL
HHHHHHCCCCCCEEHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
LSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL
HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCE
RIALASRSPQLLRQDVRRRLVPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQ
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDEQSWLNICSVGRYGHPQTLRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEECCCHHHHHHHHCCCCCCHHHHHH
LLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL
HHHCCCCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHH
EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFA
HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
AHPTQELIRPSPHSTFDWHSNRGVVIRDSHESGIHRRQS
CCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA