| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972112
Identifier: 94972112
GI number: 94972112
Start: 393348
End: 395807
Strand: Direct
Name: 94972112
Synonym: Dgeo_2645
Alternate gene names: NA
Gene position: 393348-395807 (Clockwise)
Preceding gene: 94972132
Following gene: 94972110
Centisome position: 68.51
GC content: 66.5
Gene sequence:
>2460_bases GTGTTAACCATTCACCTTCTGGGACATGCACACATCAGCCGCCACAATCAACCTGTGCCGGTTTCGGCCAAAGCGGTTGC CCTGATCGCCTACCTCGCCATCGAGAAGTTGCCCCAACACCGGGAACGGCTGGCAGACCTGCTCTGGACCACCGCCGAAG CCCGCAAGAATCTGCGCGTCGAACTGGCCCGCATCCGCACGGCGGGTCTGAATCTCTTTCCAGCCAGCCGCCAGCTGCTC TACCTCGAAGACGTGACCACCGACGTTGAGCTGTGGCAGGCGCGCCTTGGCGAAGACATGAACCAAGCCGCGCTGGCCGA GTGGCTGGCCATGTTGCGCGGCTTTCCGCTCAGCGGCCTGGAGGATCTAGGCAGCTCCAGCTTTCAGGAATGGGTGGATC AGCAACGCTGGCTTCTTAGCCAGCAGATCGAGGAGGGCCTCAGTCAGGTGTACTGGCGCTACGCCCGCGCCGGACAAACC TGGGCCATGCGGCTGATTTCGGCACGCGCCGAGACGCTGGGCTTCGAGCTGAGTGCGGAGCCGCCCACCGAACTGCACCT TCCCGATCCTGAATTGCCCCCCACCTCAGCGGGGCCGGCACATCCGCTGAAGCAGATACACTTTGAACGGCGGCACGAGG AGCAAGAACTTCAGCGTCTCTTCCAGGCGGCTGAGCAGGCCGTGCAGGTGGTGGTCCTGCACGGCCCGCCTGGCGCAGGC AAGAACTACCTCACCGAGCGCTTGGCGAGCCGTGCAGGGTGGCTGACCCTGCGGGTCTCTGACACCCGGTCAAGCCGCCT GGTCTTGGCCACGCTCGCGCAGGCGATCTTGCGGGAGAGCGATCCAGAATGCGCTGCGGCGCTGCGGCGTATGCTGCTGG CCCCCAACAGCCTGGAAGAAGACACCGTGAAAGTGGCGGTCGCGCTGGCACGGCTTGCCCGCCCAGTGCTGCTGCTCTTC GACCACGCCCACACGGCCCCCGCCGAACTTGCGCCGCTGCTCGCGTTCCTGACCCAGATGCCCAGTGAGGGGCCGCGCAT CTTTCTGCTGCTCAGCCGCCAGCATCCCATGCAGGCGCCGCTCACGCGTGCGCTGTGGGGCTGGAGCGAGGGCAACCTCA CCGAACTCGCCCTGCGGCCCCTCACAACAACCAGCGTCCAACGCGCGCTTGAGGCGTATTTTCCCTCGGATCGCTCGCGC CGCCTGCACAGCGACGCTGCCCGGTTGGTGCAGCGCAGCGAAGGCAACCCACTCCACCTGCTCAGTCTGTTGGGCCAGAC AGGGGAAACTGGAGCCAGCCTGTCGATGACTCTGCCCCAGATCCACTTCCCACAGGTGATGCGCGACACGTACGGCATGG AGATCGATCAGTGGCCGGCCCCTCTCGTCGAGGGGATGATCCGCCTCAGCGCTATCTACGGCCATTTTGACCGCCGACTG GCCCAGGCGGCCCTGGGTGAACCGCTGGCGAGCGCCGTCGATCCCTTGCTGTACGAGGCCCTCGAACGGCACATCCTGGA GGAGGTGGAGGAGGAGGGGGGGCTACAGCTGCCCGGCCTCACCCCGCTGCCCAACCCACCAGGGGGCGAGACCCGCTACA CCTTTGCCAGCGAGGGCCTGCGCATCGCGCTCGCCAGTCGCTCGCCCCAGCTTTTGCGACAAGACGTGCGGCGGCGCTTG GTGCCGGTGCTGGCGCCTGACGCACCTGGCCTGGCGGCCTACTACGCCCAGCGCGGCGGGCTGATCGAGGAGGCCGAGCG CTTACAGCGAGTCTACCGTGCTCAGCGCCAAGCCCGGCAGCTGCCGGAAGCTGGGCAGACGGATGACCTGCCGCCCCCGG CTGTTGCTGAACCCCGGCGGGTTCCTGCGGCCCAGCGGGGACCCGTGCTGTGCCAGGGATATTTGGTCTCCTGCGACGAG CAGAGCTGGCTCAACATCTGCAGTGTCGGGCGCTACGGGCATCCCCAGACCCTCCGGCTCCTCCTCAAGCTGCCCAAGAC CCCCGCCCATCAGGCCGAGCTGCGCCTGGTCTGGCGCCTCGATGTCTTTAGTGGCGGTGAGGAACTCGGCCCAGCCCGCA CCCCCTTTCCGCTGCGGGTGGCCCTACAGGGTGCCAACACCGCCTATGTGCTGGCCCGCAGCGCCACGCCCGACTATCTG GAAGACGGCGTCCGCCATGTCGTTCATCCGGCGGCCGGTTTGGGGCAGTGGACCGAACACCGCCTCACGTTCCCGGCCAG TGGCGAGGAGCAGACTCTGGAGCTGAGCGTACGTGCTCTCGATGTGGCCTTGACGCTGGGCGCCCTGAGCTGGCAGGGCC AAGCACTGCTGCCGTTCGCGGCGCACCCAACGCAGGAGCTGATCCGCCCGTCTCCCCACTCGACATTCGATTGGCACAGT AATCGAGGAGTCGTAATCAGGGATTCGCACGAATCAGGAATTCATAGACGCCAGTCATAG
Upstream 100 bases:
>100_bases CGAAGTTGCACTTGATCCAAAGGTTCGCCTGTGCCGGAGACCGCTGGTCCTCACGCTGTGCGGAGAAAAGTTCAGGACAC AGGACGGATGGAGGCCAAGG
Downstream 100 bases:
>100_bases AAAAGAAGCAGGAAGCGGAGCAACAGAACGTTGCCCTCCACCTCCTGCTTCTTCAAGCTGCGACTTAGGGGCCGACCTTA ACGCCCGCCGAGGCCAGCTT
Product: SARP family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
>819_residues MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRVELARIRTAGLNLFPASRQLL YLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGLEDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQT WAMRLISARAETLGFELSAEPPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEEDTVKVAVALARLARPVLLLF DHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAPLTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSR RLHSDAARLVQRSEGNPLHLLSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGLRIALASRSPQLLRQDVRRRL VPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQLPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDE QSWLNICSVGRYGHPQTLRLLLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFAAHPTQELIRPSPHSTFDWHS NRGVVIRDSHESGIHRRQS
Sequences:
>Translated_819_residues MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRVELARIRTAGLNLFPASRQLL YLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGLEDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQT WAMRLISARAETLGFELSAEPPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEEDTVKVAVALARLARPVLLLF DHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAPLTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSR RLHSDAARLVQRSEGNPLHLLSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGLRIALASRSPQLLRQDVRRRL VPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQLPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDE QSWLNICSVGRYGHPQTLRLLLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFAAHPTQELIRPSPHSTFDWHS NRGVVIRDSHESGIHRRQS >Mature_819_residues MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRVELARIRTAGLNLFPASRQLL YLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGLEDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQT WAMRLISARAETLGFELSAEPPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEEDTVKVAVALARLARPVLLLF DHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAPLTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSR RLHSDAARLVQRSEGNPLHLLSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGLRIALASRSPQLLRQDVRRRL VPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQLPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDE QSWLNICSVGRYGHPQTLRLLLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFAAHPTQELIRPSPHSTFDWHS NRGVVIRDSHESGIHRRQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91006; Mature: 91006
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRV CEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ELARIRTAGLNLFPASRQLLYLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGL HHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH EDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQTWAMRLISARAETLGFELSAE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEECCC PPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEEECCCCCC KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEE HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH DTVKVAVALARLARPVLLLFDHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAP HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH LTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSRRLHSDAARLVQRSEGNPLHL HHHHHHCCCCCCEEHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH LSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCE RIALASRSPQLLRQDVRRRLVPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQ EEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDEQSWLNICSVGRYGHPQTLRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEECCCHHHHHHHHCCCCCCHHHHHH LLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL HHHCCCCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHH EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFA HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC AHPTQELIRPSPHSTFDWHSNRGVVIRDSHESGIHRRQS CCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MLTIHLLGHAHISRHNQPVPVSAKAVALIAYLAIEKLPQHRERLADLLWTTAEARKNLRV CEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ELARIRTAGLNLFPASRQLLYLEDVTTDVELWQARLGEDMNQAALAEWLAMLRGFPLSGL HHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH EDLGSSSFQEWVDQQRWLLSQQIEEGLSQVYWRYARAGQTWAMRLISARAETLGFELSAE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEECCC PPTELHLPDPELPPTSAGPAHPLKQIHFERRHEEQELQRLFQAAEQAVQVVVLHGPPGAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEEECCCCCC KNYLTERLASRAGWLTLRVSDTRSSRLVLATLAQAILRESDPECAAALRRMLLAPNSLEE HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH DTVKVAVALARLARPVLLLFDHAHTAPAELAPLLAFLTQMPSEGPRIFLLLSRQHPMQAP HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH LTRALWGWSEGNLTELALRPLTTTSVQRALEAYFPSDRSRRLHSDAARLVQRSEGNPLHL HHHHHHCCCCCCEEHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH LSLLGQTGETGASLSMTLPQIHFPQVMRDTYGMEIDQWPAPLVEGMIRLSAIYGHFDRRL HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AQAALGEPLASAVDPLLYEALERHILEEVEEEGGLQLPGLTPLPNPPGGETRYTFASEGL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCE RIALASRSPQLLRQDVRRRLVPVLAPDAPGLAAYYAQRGGLIEEAERLQRVYRAQRQARQ EEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LPEAGQTDDLPPPAVAEPRRVPAAQRGPVLCQGYLVSCDEQSWLNICSVGRYGHPQTLRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEECCCHHHHHHHHCCCCCCHHHHHH LLKLPKTPAHQAELRLVWRLDVFSGGEELGPARTPFPLRVALQGANTAYVLARSATPDYL HHHCCCCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHH EDGVRHVVHPAAGLGQWTEHRLTFPASGEEQTLELSVRALDVALTLGALSWQGQALLPFA HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC AHPTQELIRPSPHSTFDWHSNRGVVIRDSHESGIHRRQS CCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA