| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972093
Identifier: 94972093
GI number: 94972093
Start: 424232
End: 424711
Strand: Direct
Name: 94972093
Synonym: Dgeo_2625
Alternate gene names: NA
Gene position: 424232-424711 (Clockwise)
Preceding gene: 94972097
Following gene: 94972086
Centisome position: 73.89
GC content: 62.92
Gene sequence:
>480_bases ATGCCGGCGACGCGAAAGGACGATTTTTCTAGACAGTTCCTCTCGGTGAGGTCGATTTCTAAAATCACGGCGCCCGCTTC AGGAAAGGTCTATACATCACCCTGTATGTTTTTGCCGCTCAACTGCGGACTGGCGTCCGGCAGACAGCCGTGGGTCGTGA TGAAGGCGGCATTACCCTCTTGCGTACGCGGCACACGCCCGGAGCAAGCTCTTTGCTGCGTCTTGTTCAAGCGCGCGGCA AGCGGCCTCGGCGGCACCGACCTGCCGGTCGTCGTGATGATTGCTGACGCCGCACAACACGCTCCGGCGGGGAACGACGC CTTCATTCCAGTCGGGATTCTGCTGGTGGCCACCTGGCGGTGGTTCCCGAACGGGCGGAGGGGCCCCGTCGCACTGTTCG GGTGTCCGGTGCAGCCATCACCGCCCCTGATCCAATGCTTCCAGCGCGCTCAACGAGGCGCAGGACACCTGCACGGCTGA
Upstream 100 bases:
>100_bases CCTTTCGTTCTCGTTCATGCGGGACTCCTCTCTCCACCTGACAAGGAGTGTCAGTACGCAGAGAGTACAGGGCTTGCATA AGTAATCGGACGAGTTGTCC
Downstream 100 bases:
>100_bases TGCACGGCTGGACGAGGCCACCCGGGAGGATGTGGCGGGGCAGCCGGGAACACTGTTGCAGCTTGCGGAGAATAGAGGCT ACCCCTACCGGAAACATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPATRKDDFSRQFLSVRSISKITAPASGKVYTSPCMFLPLNCGLASGRQPWVVMKAALPSCVRGTRPEQALCCVLFKRAA SGLGGTDLPVVVMIADAAQHAPAGNDAFIPVGILLVATWRWFPNGRRGPVALFGCPVQPSPPLIQCFQRAQRGAGHLHG
Sequences:
>Translated_159_residues MPATRKDDFSRQFLSVRSISKITAPASGKVYTSPCMFLPLNCGLASGRQPWVVMKAALPSCVRGTRPEQALCCVLFKRAA SGLGGTDLPVVVMIADAAQHAPAGNDAFIPVGILLVATWRWFPNGRRGPVALFGCPVQPSPPLIQCFQRAQRGAGHLHG >Mature_158_residues PATRKDDFSRQFLSVRSISKITAPASGKVYTSPCMFLPLNCGLASGRQPWVVMKAALPSCVRGTRPEQALCCVLFKRAAS GLGGTDLPVVVMIADAAQHAPAGNDAFIPVGILLVATWRWFPNGRRGPVALFGCPVQPSPPLIQCFQRAQRGAGHLHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16952; Mature: 16821
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATRKDDFSRQFLSVRSISKITAPASGKVYTSPCMFLPLNCGLASGRQPWVVMKAALPS CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCCCCCCEEEHHHHHHH CVRGTRPEQALCCVLFKRAASGLGGTDLPVVVMIADAAQHAPAGNDAFIPVGILLVATWR HHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCHHHHHHHHHHHH WFPNGRRGPVALFGCPVQPSPPLIQCFQRAQRGAGHLHG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PATRKDDFSRQFLSVRSISKITAPASGKVYTSPCMFLPLNCGLASGRQPWVVMKAALPS CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCCCCCCEEEHHHHHHH CVRGTRPEQALCCVLFKRAASGLGGTDLPVVVMIADAAQHAPAGNDAFIPVGILLVATWR HHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCHHHHHHHHHHHH WFPNGRRGPVALFGCPVQPSPPLIQCFQRAQRGAGHLHG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA