Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94972062

Identifier: 94972062

GI number: 94972062

Start: 460059

End: 460718

Strand: Direct

Name: 94972062

Synonym: Dgeo_2594

Alternate gene names: NA

Gene position: 460059-460718 (Clockwise)

Preceding gene: 94972064

Following gene: 94972061

Centisome position: 80.13

GC content: 59.09

Gene sequence:

>660_bases
ATGAACCGCCTGGAGAATCTGCTCCTTGGTCGCTTCACTGTGGGCCACAGGTCTGGCGTTGGGGTGGAAGCGACGACCAC
AGACCTTACACAAGTACGTCTGGGTGCCGTTTTTGGCCTTTCCGTTCTTGACCGTCTGGATGCTCTGACAGGTTGGGCAC
TCGGGCACCCCTCCATTACATCACGTCGTCGCAGCCACTACCAGAAACTCAAGCCGGGTGAAGTGCGGGTCTGGTACAAG
CCCACTCACGTCTACGGCGTGACGCTGCGCGTTCTAGCGTGCCAGAACGTCCACGGCCAGACTCTCTTCCTGGCTTACCA
AGGCCATGCTGAAAAAGCCCTGAAACGTTACGCGCTGCGCTGGACAGCAGAAAACATGCATCAGGCGCTGAAATCCAGGG
GCTTTTTTCTCGAAAGCACTCACCTGACTGATCCCAGTCGGGTTTCCACGCTCCTGGCCGTGGTCGCACTGGCCTTTGTA
TGGTGCTGTTTAGTGGGAGAGTTTGAGCAGCAGCGTGACCCGTCACGCTGCCTCAGGCACGGCTATCCCCCCAAAAGCCT
CTTCAGACGTGGCCTGGATGCCCTTCGCGCCGTGCTGACCAAGCCCAACCGTGGGGCTGCACGCGCGTTTCCCGACTTTC
TCGCCACTTTTGACCCCTAG

Upstream 100 bases:

>100_bases
ACGGTCTGCCTCACTTCGGAGGCCCCCTTTTTATCCACCGGATGACGGTGTTGCGGTGGACGCCAAACACGCGCTGTACG
CCTCTGAGGCTCATTCGCTC

Downstream 100 bases:

>100_bases
AGAGGCGTGGCAGTCTGGGCAGGTGGGCGTGGCGTAAAGAATAACTTTCGGCATGGTGACCTCGTATGAAAAGGGGACGA
ACCCACGTCCGTCCCTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Subunit; Tn10-Like Transposase

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSITSRRRSHYQKLKPGEVRVWYK
PTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFV
WCCLVGEFEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP

Sequences:

>Translated_219_residues
MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSITSRRRSHYQKLKPGEVRVWYK
PTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFV
WCCLVGEFEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
>Mature_219_residues
MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSITSRRRSHYQKLKPGEVRVWYK
PTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFV
WCCLVGEFEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24625; Mature: 24625

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSIT
CCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
SRRRSHYQKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALR
HHHHHHHHHCCCCCEEEEECCCEEHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHH
WTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRH
HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
GYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSIT
CCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
SRRRSHYQKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALR
HHHHHHHHHCCCCCEEEEECCCEEHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHH
WTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRH
HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
GYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA