| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972041
Identifier: 94972041
GI number: 94972041
Start: 479894
End: 480475
Strand: Direct
Name: 94972041
Synonym: Dgeo_2573
Alternate gene names: NA
Gene position: 479894-480475 (Clockwise)
Preceding gene: 94972042
Following gene: 94972040
Centisome position: 83.59
GC content: 70.79
Gene sequence:
>582_bases ATGCCGAAACAGCAGCGTGAGTCACCACACCTGACTACCCTGGAATTTCCGTCACCCGAAGCGGCCTGGGGCTTCGCGCA ACAGGCGCAGGAACTGGGGCACCGGGTGGACCTTCCCGAGCGAGTGAACCTCTTCCCGGCAGGCACGCACCGGGCCGTGT GGTCGGGCGCCCTGATCGGCGGCTTGGTCCTGGGCCTGGTCGGGGCGCTCGCGGAGAGCTTCATGCTGCCCCTGCCCCGC CTCGGCCCGATCTTCGCCGCCCCGACCGGCGCGCCCACCGTGCTGTTCGCGTTCCTGGGCGGGAGCGCCGGCGCGCTGAC CGGGGGACTGGCCACACTGCGGGCAGTTCCCGCGGCGAGGGCAGATCGTGAAATGGTCCAGCCAGAGCCGGGACATCCGG GCCAGGCTCAGGTCGTGGCGGTCCAGTCGCCTGCACGTGAAGCGTGGGAGGACCCACCGATGCAGCCCACGCTCGTCAAG GTCCAGGGGGAACGGGAATCCCTCGAACACCTTGCCCTGGAGTGGGGCGGCCACGCGGTCGCGGTGCCGGAGCAGAGCAT GCAACGGGGAGGTCGCCCGTGA
Upstream 100 bases:
>100_bases CACACATGACGTGAGCTTTACATGAGCTTAACAGGGCTGTGCCTACGCTACGAGGGTTACATCACCCACCGAGCACACCT CACGGTGGAGAGGAGATGGC
Downstream 100 bases:
>100_bases GCATGACCCACGACCGGCCCATGCCCATGACGCCGCCGAGGCAGATGACCCCCCTGCGCTGGGTGGCGTGGCTGACCATC CTTACCGTGACGGGTGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPKQQRESPHLTTLEFPSPEAAWGFAQQAQELGHRVDLPERVNLFPAGTHRAVWSGALIGGLVLGLVGALAESFMLPLPR LGPIFAAPTGAPTVLFAFLGGSAGALTGGLATLRAVPAARADREMVQPEPGHPGQAQVVAVQSPAREAWEDPPMQPTLVK VQGERESLEHLALEWGGHAVAVPEQSMQRGGRP
Sequences:
>Translated_193_residues MPKQQRESPHLTTLEFPSPEAAWGFAQQAQELGHRVDLPERVNLFPAGTHRAVWSGALIGGLVLGLVGALAESFMLPLPR LGPIFAAPTGAPTVLFAFLGGSAGALTGGLATLRAVPAARADREMVQPEPGHPGQAQVVAVQSPAREAWEDPPMQPTLVK VQGERESLEHLALEWGGHAVAVPEQSMQRGGRP >Mature_192_residues PKQQRESPHLTTLEFPSPEAAWGFAQQAQELGHRVDLPERVNLFPAGTHRAVWSGALIGGLVLGLVGALAESFMLPLPRL GPIFAAPTGAPTVLFAFLGGSAGALTGGLATLRAVPAARADREMVQPEPGHPGQAQVVAVQSPAREAWEDPPMQPTLVKV QGERESLEHLALEWGGHAVAVPEQSMQRGGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20387; Mature: 20255
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQQRESPHLTTLEFPSPEAAWGFAQQAQELGHRVDLPERVNLFPAGTHRAVWSGALIG CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHH GLVLGLVGALAESFMLPLPRLGPIFAAPTGAPTVLFAFLGGSAGALTGGLATLRAVPAAR HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHH ADREMVQPEPGHPGQAQVVAVQSPAREAWEDPPMQPTLVKVQGERESLEHLALEWGGHAV CCHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCEEE AVPEQSMQRGGRP ECCHHHHHCCCCC >Mature Secondary Structure PKQQRESPHLTTLEFPSPEAAWGFAQQAQELGHRVDLPERVNLFPAGTHRAVWSGALIG CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHH GLVLGLVGALAESFMLPLPRLGPIFAAPTGAPTVLFAFLGGSAGALTGGLATLRAVPAAR HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHH ADREMVQPEPGHPGQAQVVAVQSPAREAWEDPPMQPTLVKVQGERESLEHLALEWGGHAV CCHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCEEE AVPEQSMQRGGRP ECCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA