Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94972039

Identifier: 94972039

GI number: 94972039

Start: 482192

End: 483436

Strand: Direct

Name: 94972039

Synonym: Dgeo_2571

Alternate gene names: NA

Gene position: 482192-483436 (Clockwise)

Preceding gene: 94972040

Following gene: 94972038

Centisome position: 83.99

GC content: 68.59

Gene sequence:

>1245_bases
GTGAAGCCGATCTGGACGTTCCTGAGCGGCCTCCTCGCGGCCCTGCTGGTGTTTTCCTGGATCTGGTTCCTGGCCACCTG
GGCCCGCGAAGAGGGCCGCCTGGTGCCCCTCACCCGCACGACCGAGACCGCCGCCAGCCGCGACCTCCTGCGCCTGACCG
GCACCACCGCCCGCCTTTCCGGTGACAGTGAGTATGCGACGCCCACCACCTACTCACAGGCGGTGTACGCAGCGACGCAG
GATGAGGACAAGCCGGGCGCGGTGGTTCTCGTGCGGGCCGACGATCCCCTCGCGGCCATCACCGCCACGCGGCTGCAACA
CATGCCGGTCAATGCCCCGATGCTGTTCGTGACGGCCAGCGGCCTGCCCCAGGAGACCCGTGCGGAACTCCAGCGCCTCG
ACCCGCAGGGGGTGGCGATGGACAACAACATGCAGGTGTACCTGGTGGGCAACATCGGAGAGAACGTCGCGCAGCAGGTG
CGGGGGATGGGCTTCGAGACCCGGCGCATCTTTGCGGCGGACGCGGTGAACCTCGCGGAAGTGCTCGACGAGTTCATCGC
GGTGATGGAGTCCAACCACGCGGACTTGGTGCTGGTGGGCGCCACGCAAGCCCCCGAGTTCGCCCTGCCCGCCGCCAACT
GGAACGCGCACGCCGGGGACGGCTTCGCCTGGGTGACCCCCACGGGTGTACCGCCCGCCACGCGCGCGATGCTGAAGCGC
CGTGCCCCGAACGAACCGTACATCTACGTCTTCGCGCCGCCGACCGTCGTGGGCCAGGACGTGATGGACGACCTCTCGCA
GTACGGGCACGTCCAGCGCATTCCCGGCGCCACGCCCCAGGAGATGAGTGCCCGCTGGGCGGGGTACAAGGACAGTGGCC
GCAAACTCGGCTGGTGGTTCGGGCAGGAACCCCGCGGCCTGGGGTGGGGCATCGCCGAAGCGGGGCACAACGTGATCGTC
GCCAACCCCGCGGACTGGCGGGAGGTCGTGACGAGCGGCGTGCTGTCACATATGGGTAAACACGCGCCTTTGATTCTCAC
CAATCCCGACGGCACCCTTGCGGACAGCGTGCGCGGGTACCTGGACGTGATCCGGCCGACCCGTGTGCACCCCAGCAGTC
AGGTGTACAACTTCGCCTGGATCGCTGGTCGGGGAGTTCCGGTAGCGACGCAACGAACCGTGACGGAGCTGCTCAGCGTG
CAGGACGCCAGCCCCCGCACCCCGGAAACCATCAGCATGCGGTGA

Upstream 100 bases:

>100_bases
CCCACCGTGTTCTGGTGGGCGGCGGTGATGGGCTTTCTCACCGCGCTGATTCCCAACTACTGGTTGGTGCGCCTGGGCCG
CAAGCAGGGAGGGATGTGAC

Downstream 100 bases:

>100_bases
ACCCTGGCCAGTGTGCGCTGGAAGGAGGTGGTGGGAGGCTTGTTGAAGTCAGGACCGTGAAGTGGCCCGCCGACCTACGA
AAAGAGCGTGGGTTTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Transcriptional Regulator; Cell-Surface Protein; ArsR Type Transcriptional Regulator

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLSGDSEYATPTTYSQAVYAATQ
DEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTASGLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQV
RGMGFETRRIFAADAVNLAEVLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR
RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWFGQEPRGLGWGIAEAGHNVIV
ANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGYLDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSV
QDASPRTPETISMR

Sequences:

>Translated_414_residues
MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLSGDSEYATPTTYSQAVYAATQ
DEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTASGLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQV
RGMGFETRRIFAADAVNLAEVLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR
RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWFGQEPRGLGWGIAEAGHNVIV
ANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGYLDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSV
QDASPRTPETISMR
>Mature_414_residues
MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLSGDSEYATPTTYSQAVYAATQ
DEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTASGLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQV
RGMGFETRRIFAADAVNLAEVLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR
RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWFGQEPRGLGWGIAEAGHNVIV
ANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGYLDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSV
QDASPRTPETISMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45122; Mature: 45122

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCEEEEC
GDSEYATPTTYSQAVYAATQDEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTAS
CCCCCCCCCCHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEC
GLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQVRGMGFETRRIFAADAVNLAE
CCCHHHHHHHHHCCCCCEEECCCEEEEEEECCCHHHHHHHHCCCCCHHEEEHHHHHHHHH
VLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWF
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCEEEEEC
GQEPRGLGWGIAEAGHNVIVANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGY
CCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
LDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSVQDASPRTPETISMR
HHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCEEEEC
GDSEYATPTTYSQAVYAATQDEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTAS
CCCCCCCCCCHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEC
GLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQVRGMGFETRRIFAADAVNLAE
CCCHHHHHHHHHCCCCCEEECCCEEEEEEECCCHHHHHHHHCCCCCHHEEEHHHHHHHHH
VLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWF
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCEEEEEC
GQEPRGLGWGIAEAGHNVIVANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGY
CCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
LDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSVQDASPRTPETISMR
HHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA