| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972037
Identifier: 94972037
GI number: 94972037
Start: 484587
End: 485138
Strand: Direct
Name: 94972037
Synonym: Dgeo_2569
Alternate gene names: NA
Gene position: 484587-485138 (Clockwise)
Preceding gene: 94972038
Following gene: 94972036
Centisome position: 84.4
GC content: 71.92
Gene sequence:
>552_bases TTGGCGTACACGATCATGCTCTGGCTGGTGAATCCCGGTGAGCAGATCCACCAGGACGAGGCGATCGAGCTGACCCAGGG CGCCCAACGTGCGGTCTTGCCCGGTGCGATGTCCGGCGTGACCGAGCCACCGGCGGCCACACGGCTGGTCTACGGGGTGT ATGACACCCAAAACGAGGCGGCCACGGCGTTGCAGGTGGTGGGGGAGCAGCTCGCGCAGGGGCGCCCCCTGATGGTGACG CTGCGGGGTGGACACGTGTTTTTGATTCCAGCCGGGCGGGTGCACTACGCCGTTATGGCGGAAGTCGTGCGGCCCAAGGA CGTGCGCGCGGCGGAGCGGCCGGGGGCAGCGGCCGACCAGGAACGGGACCGGGCGACGGCCCGGGTCGTTGAACCGCCTC CGTTCCCAGAGCAGGACGAACAGGCCCGGCCTGCCCGCAGCGTCCCCGGGGGTGGGTCCGGACCAGGCGCGCCGCCGAGC GGCCCGGCCAGGCCCGAGGCGCAGTGGGAAACGCCGGAGCCTTCTCCCCCGGCTGTCCGGGACCGGGGATGA
Upstream 100 bases:
>100_bases GGACGCCCGGCAGGCCGCTCCGAGCTGAGGTGTAGGGTGAAGGCAGAGGGATGAAAGGCATGGCCCGCGCGCCAGTCGCC GAAGCAAAGGAGGGAACATC
Downstream 100 bases:
>100_bases CACGGGACACAGCGGGTGCCCCCGTGCTCCAGGACCTGGTGGCCGAAGGCGTGCAGGTGCTGTTCGTAGGCTTCAACCCC AGCCCACGCTCGGTGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAYTIMLWLVNPGEQIHQDEAIELTQGAQRAVLPGAMSGVTEPPAATRLVYGVYDTQNEAATALQVVGEQLAQGRPLMVT LRGGHVFLIPAGRVHYAVMAEVVRPKDVRAAERPGAAADQERDRATARVVEPPPFPEQDEQARPARSVPGGGSGPGAPPS GPARPEAQWETPEPSPPAVRDRG
Sequences:
>Translated_183_residues MAYTIMLWLVNPGEQIHQDEAIELTQGAQRAVLPGAMSGVTEPPAATRLVYGVYDTQNEAATALQVVGEQLAQGRPLMVT LRGGHVFLIPAGRVHYAVMAEVVRPKDVRAAERPGAAADQERDRATARVVEPPPFPEQDEQARPARSVPGGGSGPGAPPS GPARPEAQWETPEPSPPAVRDRG >Mature_182_residues AYTIMLWLVNPGEQIHQDEAIELTQGAQRAVLPGAMSGVTEPPAATRLVYGVYDTQNEAATALQVVGEQLAQGRPLMVTL RGGHVFLIPAGRVHYAVMAEVVRPKDVRAAERPGAAADQERDRATARVVEPPPFPEQDEQARPARSVPGGGSGPGAPPSG PARPEAQWETPEPSPPAVRDRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19434; Mature: 19303
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTIMLWLVNPGEQIHQDEAIELTQGAQRAVLPGAMSGVTEPPAATRLVYGVYDTQNEA CEEEEEEEEECCCHHHCCCCHHHHHCCCCHHCCCCHHCCCCCCCCCCEEEEEEECCCCHH ATALQVVGEQLAQGRPLMVTLRGGHVFLIPAGRVHYAVMAEVVRPKDVRAAERPGAAADQ HHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC ERDRATARVVEPPPFPEQDEQARPARSVPGGGSGPGAPPSGPARPEAQWETPEPSPPAVR HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRG CCC >Mature Secondary Structure AYTIMLWLVNPGEQIHQDEAIELTQGAQRAVLPGAMSGVTEPPAATRLVYGVYDTQNEA EEEEEEEEECCCHHHCCCCHHHHHCCCCHHCCCCHHCCCCCCCCCCEEEEEEECCCCHH ATALQVVGEQLAQGRPLMVTLRGGHVFLIPAGRVHYAVMAEVVRPKDVRAAERPGAAADQ HHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC ERDRATARVVEPPPFPEQDEQARPARSVPGGGSGPGAPPSGPARPEAQWETPEPSPPAVR HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA