| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is arsB [H]
Identifier: 94972015
GI number: 94972015
Start: 502551
End: 503852
Strand: Direct
Name: arsB [H]
Synonym: Dgeo_2547
Alternate gene names: 94972015
Gene position: 502551-503852 (Clockwise)
Preceding gene: 94972016
Following gene: 94972014
Centisome position: 87.53
GC content: 67.43
Gene sequence:
>1302_bases ATGCTGCTCGCCGTCCTGATCTTCCTGTTCACCCTCGTCCTCGTCATCTGGCAGCCGAAGCTCAGGTGGCAACCAGGGGG CCTGGGCATCGGCTGGAGTGCGTCACTCGGCGCGGTCCTCGCCCTGCTCACCGGGGTCGTCCACCTCGCGGACATTCCGG TGGTGTGGAACATCGTGTGGAACGCGACCATCACCTTCGTTGCCCTCATCATCATCAGCCTGATCCTCGACGAGGCCGGG TTCTTCAAGTGGTCTGCCCTGCACGTGGCCCGCTGGGGCCGCGGGCACGGCCACCTGCTCTTTGCTCTGGTGATCCTGTT GGGTGCCGCCGTGAGTGCCCTGTTCGCCAACGACGGCACGGCGCTGATCCTCACGCCCATCGTGCTCGCCATGCTCACCG CGCTGGGCTTCCGGCCCGCCACCACCCTCGCGTTCATCCTCGCCACGGGGTTCATCGCCGACAGTGCCAGCCTGCCGCTG GTCATCAGCAACCTGGTGAACATTGTCAGCGCCGACTACTTCAACCTGGACTTCGGACAGTACGCCAGGGTGATGGTGCC GGTGGACCTCGCGGCGATCCTCGCCAGTCTCGGCGTGCTGTACGTGATGTTCCGCCGCGATCTGCCTGCGCGTTACGACC CAGGCACGCTGGGAACGCCTGCCCAGGCCATCCGTGACCCCAACGTCTTCCGGGTGGGCTGGATCGTCCTGGTGGTCCTG CTGGTCGGGTACTTCGCCGCCGGGCCGCTCGGGGTGCCCGTCAGCCTGGTCGCGGCGCTGGGGGCAGGCCTCCTGTGGCT CGTCGCCGCTCGTGGGCACGTCGTGAGCACCCGGAACGTCCTCAGGGGCGCGCCCTGGCAGATCGTCATTTTCTCGCTGG GCATGTACCTGGTCGTGTACGGTCTGCGAAACGCCGGGCTGACCGACTTGCTGGCGGGCGTCCTTGACCGACTGGCTCAG GGCGGACTTTGGAGCGCCACCCTCGGCACCGGCTTTCTGACCGCCTTCCTCGCCAGTGTGATGAACAACATGCCCAGCGT CCTGATCGGCGCGCTCGCCATCGACGCCAGCCAGGCCACCGGAGCCGTCAAGCAGGGCATGGTCTACGCGAATGTCGTCG GCAACGACCTGGGGCCGAAGATCACGCCCATCGGGAGCCTCGCCACGCTGCTGTGGCTGCACGTGCTGGCCAGCAAGGGG ATCCGCATCGGGTGGGGCCAGTATTTCCGGGTCGGGATCGTCCTCACGCTGCCGGTGCTGCTGGTCACGCTCGCGGCGCT CGCGCTGCGCCTGGGAGGCTGA
Upstream 100 bases:
>100_bases TTCAGGGGCAGTTCGAGGCCTTCGTGCAGGCCCTCAAGGATGGGCAGCCCGTGCCCGAGAGCTACGAGGACAGCCCCGCC GTGAACGCGCAGTAAGCCGC
Downstream 100 bases:
>100_bases CATGCGACCGCTGAGGCCTGAAACCTGTCTCCGCCTGCTGAGCGTCCTGGGGCTGATCCCACTTGCCGGCCTGGCGTACG TCCTGGTCGTGAGTGCCGGG
Product: arsenical pump membrane protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MLLAVLIFLFTLVLVIWQPKLRWQPGGLGIGWSASLGAVLALLTGVVHLADIPVVWNIVWNATITFVALIIISLILDEAG FFKWSALHVARWGRGHGHLLFALVILLGAAVSALFANDGTALILTPIVLAMLTALGFRPATTLAFILATGFIADSASLPL VISNLVNIVSADYFNLDFGQYARVMVPVDLAAILASLGVLYVMFRRDLPARYDPGTLGTPAQAIRDPNVFRVGWIVLVVL LVGYFAAGPLGVPVSLVAALGAGLLWLVAARGHVVSTRNVLRGAPWQIVIFSLGMYLVVYGLRNAGLTDLLAGVLDRLAQ GGLWSATLGTGFLTAFLASVMNNMPSVLIGALAIDASQATGAVKQGMVYANVVGNDLGPKITPIGSLATLLWLHVLASKG IRIGWGQYFRVGIVLTLPVLLVTLAALALRLGG
Sequences:
>Translated_433_residues MLLAVLIFLFTLVLVIWQPKLRWQPGGLGIGWSASLGAVLALLTGVVHLADIPVVWNIVWNATITFVALIIISLILDEAG FFKWSALHVARWGRGHGHLLFALVILLGAAVSALFANDGTALILTPIVLAMLTALGFRPATTLAFILATGFIADSASLPL VISNLVNIVSADYFNLDFGQYARVMVPVDLAAILASLGVLYVMFRRDLPARYDPGTLGTPAQAIRDPNVFRVGWIVLVVL LVGYFAAGPLGVPVSLVAALGAGLLWLVAARGHVVSTRNVLRGAPWQIVIFSLGMYLVVYGLRNAGLTDLLAGVLDRLAQ GGLWSATLGTGFLTAFLASVMNNMPSVLIGALAIDASQATGAVKQGMVYANVVGNDLGPKITPIGSLATLLWLHVLASKG IRIGWGQYFRVGIVLTLPVLLVTLAALALRLGG >Mature_433_residues MLLAVLIFLFTLVLVIWQPKLRWQPGGLGIGWSASLGAVLALLTGVVHLADIPVVWNIVWNATITFVALIIISLILDEAG FFKWSALHVARWGRGHGHLLFALVILLGAAVSALFANDGTALILTPIVLAMLTALGFRPATTLAFILATGFIADSASLPL VISNLVNIVSADYFNLDFGQYARVMVPVDLAAILASLGVLYVMFRRDLPARYDPGTLGTPAQAIRDPNVFRVGWIVLVVL LVGYFAAGPLGVPVSLVAALGAGLLWLVAARGHVVSTRNVLRGAPWQIVIFSLGMYLVVYGLRNAGLTDLLAGVLDRLAQ GGLWSATLGTGFLTAFLASVMNNMPSVLIGALAIDASQATGAVKQGMVYANVVGNDLGPKITPIGSLATLLWLHVLASKG IRIGWGQYFRVGIVLTLPVLLVTLAALALRLGG
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=431, Percent_Identity=70.5336426914153, Blast_Score=585, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 45702; Mature: 45702
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAVLIFLFTLVLVIWQPKLRWQPGGLGIGWSASLGAVLALLTGVVHLADIPVVWNIVW CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH NATITFVALIIISLILDEAGFFKWSALHVARWGRGHGHLLFALVILLGAAVSALFANDGT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC ALILTPIVLAMLTALGFRPATTLAFILATGFIADSASLPLVISNLVNIVSADYFNLDFGQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH YARVMVPVDLAAILASLGVLYVMFRRDLPARYDPGTLGTPAQAIRDPNVFRVGWIVLVVL HHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHH LVGYFAAGPLGVPVSLVAALGAGLLWLVAARGHVVSTRNVLRGAPWQIVIFSLGMYLVVY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCHHHHHHHHHHHHHHH GLRNAGLTDLLAGVLDRLAQGGLWSATLGTGFLTAFLASVMNNMPSVLIGALAIDASQAT HHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHH GAVKQGMVYANVVGNDLGPKITPIGSLATLLWLHVLASKGIRIGWGQYFRVGIVLTLPVL HHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHH LVTLAALALRLGG HHHHHHHHHHCCC >Mature Secondary Structure MLLAVLIFLFTLVLVIWQPKLRWQPGGLGIGWSASLGAVLALLTGVVHLADIPVVWNIVW CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH NATITFVALIIISLILDEAGFFKWSALHVARWGRGHGHLLFALVILLGAAVSALFANDGT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC ALILTPIVLAMLTALGFRPATTLAFILATGFIADSASLPLVISNLVNIVSADYFNLDFGQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH YARVMVPVDLAAILASLGVLYVMFRRDLPARYDPGTLGTPAQAIRDPNVFRVGWIVLVVL HHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHH LVGYFAAGPLGVPVSLVAALGAGLLWLVAARGHVVSTRNVLRGAPWQIVIFSLGMYLVVY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCHHHHHHHHHHHHHHH GLRNAGLTDLLAGVLDRLAQGGLWSATLGTGFLTAFLASVMNNMPSVLIGALAIDASQAT HHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHH GAVKQGMVYANVVGNDLGPKITPIGSLATLLWLHVLASKGIRIGWGQYFRVGIVLTLPVL HHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHH LVTLAALALRLGG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9006011 [H]