| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is crcB2
Identifier: 94972014
GI number: 94972014
Start: 504110
End: 504505
Strand: Direct
Name: crcB2
Synonym: Dgeo_2546
Alternate gene names: 94972014
Gene position: 504110-504505 (Clockwise)
Preceding gene: 94972015
Following gene: 94972013
Centisome position: 87.8
GC content: 67.42
Gene sequence:
>396_bases ATGCCGTTTTGGTTCGGAGTCGCGGTCGGTGGTGCCTTGGGTGCCCTCGCCCGGTATGGCGTGAGTCTGCTGGTGGCGGG TCGGCTCGCCAGCACCGCCTGGGGGAACTTTCCCCTCGCCACGCTGCTCGTCAATGTCCTTGGGTCGTTCCTGCTGGCCT TCATCACCACGCTGGCCCTGCGCGGCCTCGTGTCTCCAGCCTGGCGTCTCGCCGTTGGCACGGGCTTCATCGGCGCCTTG ACCACCTTTTCCACCTTCGCCTGGGAAAGCGACCTGATGGTGCGTGACGGGGAAGCCGCGCGGGCCAGCCTGTATGTCCT GGGCAATCTGGTTCTCGGGTACGCCGCTGTCTTGCTGGGCCGGGCACTCGCCGCCCGCCTCGGAGGTGGAGCATGA
Upstream 100 bases:
>100_bases AGCCTTCCAGTACGGTGAGCAACACAGGCGATGGCATGCGCCTTGAACCGCCCCGCGTCCGGCTGATTATGCCTACCTTC CCAGGACGCCGGGAGGTCGT
Downstream 100 bases:
>100_bases ACATCAGGTGGATGGAAGCGGAACGCTTGCGCGTCTTCCTCGGTACGTCGGATCAGGTGGGTGGCCAGGTCGCCAGTGAC GCCCTGCTGGAAGCTGCACA
Product: crcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MPFWFGVAVGGALGALARYGVSLLVAGRLASTAWGNFPLATLLVNVLGSFLLAFITTLALRGLVSPAWRLAVGTGFIGAL TTFSTFAWESDLMVRDGEAARASLYVLGNLVLGYAAVLLGRALAARLGGGA
Sequences:
>Translated_131_residues MPFWFGVAVGGALGALARYGVSLLVAGRLASTAWGNFPLATLLVNVLGSFLLAFITTLALRGLVSPAWRLAVGTGFIGAL TTFSTFAWESDLMVRDGEAARASLYVLGNLVLGYAAVLLGRALAARLGGGA >Mature_130_residues PFWFGVAVGGALGALARYGVSLLVAGRLASTAWGNFPLATLLVNVLGSFLLAFITTLALRGLVSPAWRLAVGTGFIGALT TFSTFAWESDLMVRDGEAARASLYVLGNLVLGYAAVLLGRALAARLGGGA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB2_DEIGD (Q1J3F4)
Other databases:
- EMBL: CP000358 - RefSeq: YP_594054.1 - STRING: Q1J3F4 - GeneID: 4073777 - GenomeReviews: CP000358_GR - KEGG: dge:Dgeo_2546 - NMPDR: fig|68909.1.peg.40 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: LERAPAW - BioCyc: DGEO319795:DGEO_2546-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13446; Mature: 13315
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xff94858)-; HASH(0xdc995d0)-; HASH(0x10283798)-; HASH(0x1017cbb0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFWFGVAVGGALGALARYGVSLLVAGRLASTAWGNFPLATLLVNVLGSFLLAFITTLAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RGLVSPAWRLAVGTGFIGALTTFSTFAWESDLMVRDGEAARASLYVLGNLVLGYAAVLLG HHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH RALAARLGGGA HHHHHHCCCCH >Mature Secondary Structure PFWFGVAVGGALGALARYGVSLLVAGRLASTAWGNFPLATLLVNVLGSFLLAFITTLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RGLVSPAWRLAVGTGFIGALTTFSTFAWESDLMVRDGEAARASLYVLGNLVLGYAAVLLG HHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH RALAARLGGGA HHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA