| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is soj [H]
Identifier: 94971963
GI number: 94971963
Start: 556729
End: 557505
Strand: Direct
Name: soj [H]
Synonym: Dgeo_2495
Alternate gene names: 94971963
Gene position: 556729-557505 (Clockwise)
Preceding gene: 94971966
Following gene: 94971962
Centisome position: 96.97
GC content: 65.64
Gene sequence:
>777_bases ATGCGCACACTGACGTTCTTCAACCATGCAGGCGGGGTGATGAAATCGAGCCTGACGCGCGATGTGGGCCACACACTCGC GCAGGCCGGTCTGCGCGTGCTGGTCCTGGACCTCGATCCGCAGGCCAACCTGACCGACTGGTTGGGAGTGTCAGATGTTT CGCGCGAACAGACGGTATACGAGACGGCCACGCGGGGTGCTCCTCTCCCCTGCCCTACGCGGGTGCATGGCCTGGACCTG ATTCCCAGTGATGTGTCCTTGGCGCTGGCAGAGGGGCAGATGATGGGCGTGGTGGGGGCACATCTGCACCTGCGGCAGGC CCTGCAGGCGGTGACGGGCCGCTACGACGTTGCGCTGATCGACAGCCCGCCTAGTCTGGGACAACTGGCAATCCTGGGCG CCCTGGCCGCCGATCAGTTGATTGTGCCAGTTCCCACCCGCCAGAAGGGCATGAACGCGCTCGCTGGCCTCTCCGAGGCA ATGGCGACCTACCGCAAACTGCGCCCCGATCTGACGGTCGCACTCTACGTGCCCACCCTCCACGACGCACGGCGTCTGCA CGACCGTGAAGCATTGGCTGCCCTCCAAGGGATGTTGCGGCCCCTGGCCAGTCCGATTCCCGATCGCGGCGCAGTCTGGA ACGATAGCGCGAGCGCCGGGCAGCCGGTTGGGGTGTACGCGCCTGGTTCGCCCGTTCATCAGGACGTGTTGCGTGTCACG GCGGAAATCGCGCAGGCGGCCGGCCTCAATGTGGAGTTGCCGGGGAGAAAAGCATGA
Upstream 100 bases:
>100_bases CTCCAGCAGGGACCATGGCGCAAAACGGCACAAGTTGTCCGATACCTCTTGCTCGTCACGTGACGAGCGGACGGGGCAGC CATCAGGTAGGCTAGGGGAA
Downstream 100 bases:
>100_bases CCCGCAAAGTCAGGCCGGCGATCGGCGCGCGTCTCAGTGGGCTGGTGGAGGGGGTGGAGGCGCTCGCGCAGCCCGCTGTA ACGCGCGTGGCGGTGCAGGC
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVYETATRGAPLPCPTRVHGLDL IPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALIDSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEA MATYRKLRPDLTVALYVPTLHDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT AEIAQAAGLNVELPGRKA
Sequences:
>Translated_258_residues MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVYETATRGAPLPCPTRVHGLDL IPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALIDSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEA MATYRKLRPDLTVALYVPTLHDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT AEIAQAAGLNVELPGRKA >Mature_258_residues MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVYETATRGAPLPCPTRVHGLDL IPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALIDSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEA MATYRKLRPDLTVALYVPTLHDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT AEIAQAAGLNVELPGRKA
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27310; Mature: 27310
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVY CCEEEEEHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHH ETATRGAPLPCPTRVHGLDLIPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALI HHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE DSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEAMATYRKLRPDLTVALYVPTL CCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH HDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH AEIAQAAGLNVELPGRKA HHHHHHCCCCEECCCCCC >Mature Secondary Structure MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVY CCEEEEEHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHH ETATRGAPLPCPTRVHGLDLIPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALI HHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE DSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEAMATYRKLRPDLTVALYVPTL CCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH HDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH AEIAQAAGLNVELPGRKA HHHHHHCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]