Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is soj [H]

Identifier: 94971963

GI number: 94971963

Start: 556729

End: 557505

Strand: Direct

Name: soj [H]

Synonym: Dgeo_2495

Alternate gene names: 94971963

Gene position: 556729-557505 (Clockwise)

Preceding gene: 94971966

Following gene: 94971962

Centisome position: 96.97

GC content: 65.64

Gene sequence:

>777_bases
ATGCGCACACTGACGTTCTTCAACCATGCAGGCGGGGTGATGAAATCGAGCCTGACGCGCGATGTGGGCCACACACTCGC
GCAGGCCGGTCTGCGCGTGCTGGTCCTGGACCTCGATCCGCAGGCCAACCTGACCGACTGGTTGGGAGTGTCAGATGTTT
CGCGCGAACAGACGGTATACGAGACGGCCACGCGGGGTGCTCCTCTCCCCTGCCCTACGCGGGTGCATGGCCTGGACCTG
ATTCCCAGTGATGTGTCCTTGGCGCTGGCAGAGGGGCAGATGATGGGCGTGGTGGGGGCACATCTGCACCTGCGGCAGGC
CCTGCAGGCGGTGACGGGCCGCTACGACGTTGCGCTGATCGACAGCCCGCCTAGTCTGGGACAACTGGCAATCCTGGGCG
CCCTGGCCGCCGATCAGTTGATTGTGCCAGTTCCCACCCGCCAGAAGGGCATGAACGCGCTCGCTGGCCTCTCCGAGGCA
ATGGCGACCTACCGCAAACTGCGCCCCGATCTGACGGTCGCACTCTACGTGCCCACCCTCCACGACGCACGGCGTCTGCA
CGACCGTGAAGCATTGGCTGCCCTCCAAGGGATGTTGCGGCCCCTGGCCAGTCCGATTCCCGATCGCGGCGCAGTCTGGA
ACGATAGCGCGAGCGCCGGGCAGCCGGTTGGGGTGTACGCGCCTGGTTCGCCCGTTCATCAGGACGTGTTGCGTGTCACG
GCGGAAATCGCGCAGGCGGCCGGCCTCAATGTGGAGTTGCCGGGGAGAAAAGCATGA

Upstream 100 bases:

>100_bases
CTCCAGCAGGGACCATGGCGCAAAACGGCACAAGTTGTCCGATACCTCTTGCTCGTCACGTGACGAGCGGACGGGGCAGC
CATCAGGTAGGCTAGGGGAA

Downstream 100 bases:

>100_bases
CCCGCAAAGTCAGGCCGGCGATCGGCGCGCGTCTCAGTGGGCTGGTGGAGGGGGTGGAGGCGCTCGCGCAGCCCGCTGTA
ACGCGCGTGGCGGTGCAGGC

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVYETATRGAPLPCPTRVHGLDL
IPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALIDSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEA
MATYRKLRPDLTVALYVPTLHDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT
AEIAQAAGLNVELPGRKA

Sequences:

>Translated_258_residues
MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVYETATRGAPLPCPTRVHGLDL
IPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALIDSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEA
MATYRKLRPDLTVALYVPTLHDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT
AEIAQAAGLNVELPGRKA
>Mature_258_residues
MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVYETATRGAPLPCPTRVHGLDL
IPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALIDSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEA
MATYRKLRPDLTVALYVPTLHDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT
AEIAQAAGLNVELPGRKA

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27310; Mature: 27310

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVY
CCEEEEEHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHH
ETATRGAPLPCPTRVHGLDLIPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALI
HHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
DSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEAMATYRKLRPDLTVALYVPTL
CCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
HDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
AEIAQAAGLNVELPGRKA
HHHHHHCCCCEECCCCCC
>Mature Secondary Structure
MRTLTFFNHAGGVMKSSLTRDVGHTLAQAGLRVLVLDLDPQANLTDWLGVSDVSREQTVY
CCEEEEEHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHH
ETATRGAPLPCPTRVHGLDLIPSDVSLALAEGQMMGVVGAHLHLRQALQAVTGRYDVALI
HHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
DSPPSLGQLAILGALAADQLIVPVPTRQKGMNALAGLSEAMATYRKLRPDLTVALYVPTL
CCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
HDARRLHDREALAALQGMLRPLASPIPDRGAVWNDSASAGQPVGVYAPGSPVHQDVLRVT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
AEIAQAAGLNVELPGRKA
HHHHHHCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]