| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971946
Identifier: 94971946
GI number: 94971946
Start: 573480
End: 574076
Strand: Direct
Name: 94971946
Synonym: Dgeo_2478
Alternate gene names: NA
Gene position: 573480-574076 (Clockwise)
Preceding gene: 94971951
Following gene: NA
Centisome position: 99.89
GC content: 70.69
Gene sequence:
>597_bases ATGAAGCTCCGCACCCTGATTCGTCTCGCCGTCTCTGGCGACCGCACGGCTGGTCCGGACAATTCAGGCGCCGTTCGAGC GGCTGCCCGCCGCGCTGCTGAGGCTGTGAGGCAGGATCCCCGTGTTCAGGAGGCTGCCGCTGGGCTGCGCGGCCGCGTGC AGGAACTGAGCAGCGCTGCTCGCCTGCGAGCTGACCGGCACCTTGAGCGGCTGATCGAGGCCGCGCATACCCGCCAGGGG GAACCTGTGCCCGCTGAGGTCGCCGCGTTGCTCGCTCGGCGCCGCGAGGCGCGGGAAACCCAGGCACGGCAACTACGGGC ACGGGCCGCCCTGATCGCCCTAGGAGACGGGCCGGAACAGCGCCGGGTGCTGACCCTGGTGGCGCAGGCGACGCCTTGGG CTGGTGGTGAGGCGGCAGAACTGCGTTACACCCAGATCCTCGACCGCCTAGCCTCTTCCGGTGAGGCGGGGGCGGAGATG CGCGTTCACCGGGCCCTCTGGACGCTGGCCGAGCGCCACGTCCTGGCCGTAAGTCCGCATGGGCGCGTCAGCGCCTGCCC GCTTGCGCAGGAGCCGATCTCAAACCAGTCCCTGTAA
Upstream 100 bases:
>100_bases CAATTTTGCCGAACAAGGGTGCTGGCTTCGGCTCCACGCCACCGCCTCTTGATCAACTGGCTTTCCCCCACACTGGCCGG CGGCATGGAACAATAGGGGG
Downstream 100 bases:
>100_bases CCCTCACGCCCATAAGGGTGAGCTGGGGCAGCTCTCTTCTGCGTGCCAGAACAAGTGACGCTCCACTCCAGCCCAGCGGC ACGGCGGCGCTGCTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAARLRADRHLERLIEAAHTRQG EPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQRRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEM RVHRALWTLAERHVLAVSPHGRVSACPLAQEPISNQSL
Sequences:
>Translated_198_residues MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAARLRADRHLERLIEAAHTRQG EPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQRRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEM RVHRALWTLAERHVLAVSPHGRVSACPLAQEPISNQSL >Mature_198_residues MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAARLRADRHLERLIEAAHTRQG EPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQRRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEM RVHRALWTLAERHVLAVSPHGRVSACPLAQEPISNQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21409; Mature: 21409
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAA CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RLRADRHLERLIEAAHTRQGEPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH RRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEMRVHRALWTLAERHVLAVSPH HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCC GRVSACPLAQEPISNQSL CCCEECCCCCCCCCCCCC >Mature Secondary Structure MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAA CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RLRADRHLERLIEAAHTRQGEPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH RRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEMRVHRALWTLAERHVLAVSPH HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCC GRVSACPLAQEPISNQSL CCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA