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The map label for this gene is sopA [C]

Identifier: 94971945

GI number: 94971945

Start: 427

End: 1197

Strand: Direct

Name: sopA [C]

Synonym: Dgeo_2477

Alternate gene names: 94971945

Gene position: 427-1197 (Clockwise)

Preceding gene: NA

Following gene: 94971944

Centisome position: 0.07

GC content: 66.93

Gene sequence:

>771_bases
ATGATCGTTCTGACGGTGTTCAACCACGCGGGTGGGGCAGGCAAGACCAGCATCACGCGCGAAGTGGGCTTTGAGTTCGC
GCAACGTGGGCTGCGGGTGTTGCTGATCGACCTGGATCCCCAGGCCAATCTGACCGGCTGGCTTGGCGTCAGCGGAGTAC
GGCCAGAACAGACCGTGTATGACGTGGCAGTGGAGGGCCAAGCTCTGCCCTTACCCCTGCATGTTCACGATCTCGATCTG
ATTCCCTCCCATGTCAGCCTGGCCCTGGCCGAGGGGCAGATGATGGGGCGCGTCGGGGCACATACTCGGCTGCGCCGTGC
CCTCGAGGACCTGCGGGACCGGTACGACGTGGTGTTGATTGACAGCCCGCCCAGTCTGGGACAGCTGTCGATCCTGGGCG
CGCTGGCTGCCGACCAGATGGTGGTTCCAGTCCCAACCCGACAAAAGGGACTCGACGCTCTCCCTGGCCTGCGCGAAGCC
TTCGAGGAGTACCGGCAGGTTCGACCCGATTTGCGGGTGGCCATCTACGTTCCGACGCTGTATGACGGCCGCCGCCTGCA
CGACCGCGAGGTGCTGGCCGAACTTCAGGCGCACCTGTCGCCGCTCTCGGCCCCGGTTCCGCAGCGGGAGGCGGTGTGGC
TGGACAGCACGACCGCCGGGCAACCCGTCGGTGTCTATGCCCCCGGCTCCCCGGTTCACCGCGATGTGCAGCGGCTGGCG
GATGACGTGGCGCGGGCGGCGGACATCCGGCTCCCCGAGGGGGCAGCATGA

Upstream 100 bases:

>100_bases
CGAACGTGTGTGACTCAGCTGTTCAGGGAGAACCGCGCTGTGGCGTGCGCGAGAAAACCGGCCCAGCATCACTGGCTTTC
CACGCGCTATCGTAGGTGTA

Downstream 100 bases:

>100_bases
CCCGGCGCCGTCCCGAACGCCGCGGCGACCTGGCCGGGCTGCTGGGCCGCGCGCAAGACCTCACCCAGCCCGCCGAGACC
GACACCCGCCGGGTCGCCCT

Product: conjugal plasmid transfer ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIVLTVFNHAGGAGKTSITREVGFEFAQRGLRVLLIDLDPQANLTGWLGVSGVRPEQTVYDVAVEGQALPLPLHVHDLDL
IPSHVSLALAEGQMMGRVGAHTRLRRALEDLRDRYDVVLIDSPPSLGQLSILGALAADQMVVPVPTRQKGLDALPGLREA
FEEYRQVRPDLRVAIYVPTLYDGRRLHDREVLAELQAHLSPLSAPVPQREAVWLDSTTAGQPVGVYAPGSPVHRDVQRLA
DDVARAADIRLPEGAA

Sequences:

>Translated_256_residues
MIVLTVFNHAGGAGKTSITREVGFEFAQRGLRVLLIDLDPQANLTGWLGVSGVRPEQTVYDVAVEGQALPLPLHVHDLDL
IPSHVSLALAEGQMMGRVGAHTRLRRALEDLRDRYDVVLIDSPPSLGQLSILGALAADQMVVPVPTRQKGLDALPGLREA
FEEYRQVRPDLRVAIYVPTLYDGRRLHDREVLAELQAHLSPLSAPVPQREAVWLDSTTAGQPVGVYAPGSPVHRDVQRLA
DDVARAADIRLPEGAA
>Mature_256_residues
MIVLTVFNHAGGAGKTSITREVGFEFAQRGLRVLLIDLDPQANLTGWLGVSGVRPEQTVYDVAVEGQALPLPLHVHDLDL
IPSHVSLALAEGQMMGRVGAHTRLRRALEDLRDRYDVVLIDSPPSLGQLSILGALAADQMVVPVPTRQKGLDALPGLREA
FEEYRQVRPDLRVAIYVPTLYDGRRLHDREVLAELQAHLSPLSAPVPQREAVWLDSTTAGQPVGVYAPGSPVHRDVQRLA
DDVARAADIRLPEGAA

Specific function: May play a role in septum formation [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27832; Mature: 27832

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLTVFNHAGGAGKTSITREVGFEFAQRGLRVLLIDLDPQANLTGWLGVSGVRPEQTVY
CEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEECCCCCCCCCCEE
DVAVEGQALPLPLHVHDLDLIPSHVSLALAEGQMMGRVGAHTRLRRALEDLRDRYDVVLI
EEEECCCCCCEEEEECCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DSPPSLGQLSILGALAADQMVVPVPTRQKGLDALPGLREAFEEYRQVRPDLRVAIYVPTL
ECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC
YDGRRLHDREVLAELQAHLSPLSAPVPQREAVWLDSTTAGQPVGVYAPGSPVHRDVQRLA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHH
DDVARAADIRLPEGAA
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIVLTVFNHAGGAGKTSITREVGFEFAQRGLRVLLIDLDPQANLTGWLGVSGVRPEQTVY
CEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEECCCCCCCCCCEE
DVAVEGQALPLPLHVHDLDLIPSHVSLALAEGQMMGRVGAHTRLRRALEDLRDRYDVVLI
EEEECCCCCCEEEEECCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DSPPSLGQLSILGALAADQMVVPVPTRQKGLDALPGLREAFEEYRQVRPDLRVAIYVPTL
ECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC
YDGRRLHDREVLAELQAHLSPLSAPVPQREAVWLDSTTAGQPVGVYAPGSPVHRDVQRLA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHH
DDVARAADIRLPEGAA
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]