Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94971944

Identifier: 94971944

GI number: 94971944

Start: 1194

End: 2105

Strand: Direct

Name: 94971944

Synonym: Dgeo_2476

Alternate gene names: NA

Gene position: 1194-2105 (Clockwise)

Preceding gene: 94971945

Following gene: 94971943

Centisome position: 0.21

GC content: 70.5

Gene sequence:

>912_bases
ATGACCCGGCGCCGTCCCGAACGCCGCGGCGACCTGGCCGGGCTGCTGGGCCGCGCGCAAGACCTCACCCAGCCCGCCGA
GACCGACACCCGCCGGGTCGCCCTGAGCGAGCTGCGGCCCCACGGCGGCCAGCCGCGCCGGTACTTTACGCCCTCGGAAC
TCGAAGCCCTGACGCAGAGCGTGCGCGAGCGGGGGGTGCTGCAACCGCTGCTGGTCCGGCCTGCCCCGGACGGGTCGGGG
TACGAGATCGCGGCGGGCGAGCGCCGGTACCGGGCCGCTCTGGCCGCCGGACTGCCCGACGTGCCGGTCCTGATCCGGCC
CCTGAGCGACGAGCAGATGCTGGAAGTCGGGCTGGTGGAGAACCTCCAGCGCGAGAACCTCAACCCGCTGGACGAGGTGG
AGGGGACGTTGCGGCTGCTGGCCCTGCGCCTGAACGTGACGCCCGAGGAGGCCCGCCAGAGGATGATGGTGGCCCTGCGC
CGTCCGACCGAGGCGGACCTGCAGATTTTCGAGCAGGTCTTTACCCTGCTGGGCCGTGAGAGCTGGGAGAGCTTCGCCAA
GAACAAGCTGCGGGTGTTGCAGTGGCCGCCCGAGGTGCTGGAGGCCATGCGGGAACGCGGCCTGGCCTACAGCCTGGCGG
CCGTGGTGGCCGCCGCACCCGCCGAACACCGCGCCCACCTGCTTGAAGAAGCCCTAGGCGGCGCTACCCGGCAGCAGCTC
CGCGAGAGATTGGCGGCACTGAAGCCGGCACCGGTGGGGTCACGGATCAACGTCCGTGAAGTGCAGCGCCTGGGCCGGAC
ACTGGGAAATTCCAAGTGGCTTCAGACGTTATCGGCGCAGCAGCAAGTCGAACTCGACCGCTGGCTCAGGAAGATGCCCG
AGTGGGTCCGGGACACGCAGGAAAAGCGGTAA

Upstream 100 bases:

>100_bases
TCGGTGTCTATGCCCCCGGCTCCCCGGTTCACCGCGATGTGCAGCGGCTGGCGGATGACGTGGCGCGGGCGGCGGACATC
CGGCTCCCCGAGGGGGCAGC

Downstream 100 bases:

>100_bases
GGAAGAAGACGGCGCGTTTCCTGAGCTGCTTGATGGCCTTACCCTCAAAGTCGCGCGGCCCAAGGCACAAGCAGGGCCAC
GCACCCTTGCTGGGCTCCCT

Product: parB-like partition proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTRRRPERRGDLAGLLGRAQDLTQPAETDTRRVALSELRPHGGQPRRYFTPSELEALTQSVRERGVLQPLLVRPAPDGSG
YEIAAGERRYRAALAAGLPDVPVLIRPLSDEQMLEVGLVENLQRENLNPLDEVEGTLRLLALRLNVTPEEARQRMMVALR
RPTEADLQIFEQVFTLLGRESWESFAKNKLRVLQWPPEVLEAMRERGLAYSLAAVVAAAPAEHRAHLLEEALGGATRQQL
RERLAALKPAPVGSRINVREVQRLGRTLGNSKWLQTLSAQQQVELDRWLRKMPEWVRDTQEKR

Sequences:

>Translated_303_residues
MTRRRPERRGDLAGLLGRAQDLTQPAETDTRRVALSELRPHGGQPRRYFTPSELEALTQSVRERGVLQPLLVRPAPDGSG
YEIAAGERRYRAALAAGLPDVPVLIRPLSDEQMLEVGLVENLQRENLNPLDEVEGTLRLLALRLNVTPEEARQRMMVALR
RPTEADLQIFEQVFTLLGRESWESFAKNKLRVLQWPPEVLEAMRERGLAYSLAAVVAAAPAEHRAHLLEEALGGATRQQL
RERLAALKPAPVGSRINVREVQRLGRTLGNSKWLQTLSAQQQVELDRWLRKMPEWVRDTQEKR
>Mature_302_residues
TRRRPERRGDLAGLLGRAQDLTQPAETDTRRVALSELRPHGGQPRRYFTPSELEALTQSVRERGVLQPLLVRPAPDGSGY
EIAAGERRYRAALAAGLPDVPVLIRPLSDEQMLEVGLVENLQRENLNPLDEVEGTLRLLALRLNVTPEEARQRMMVALRR
PTEADLQIFEQVFTLLGRESWESFAKNKLRVLQWPPEVLEAMRERGLAYSLAAVVAAAPAEHRAHLLEEALGGATRQQLR
ERLAALKPAPVGSRINVREVQRLGRTLGNSKWLQTLSAQQQVELDRWLRKMPEWVRDTQEKR

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 34363; Mature: 34232

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRRPERRGDLAGLLGRAQDLTQPAETDTRRVALSELRPHGGQPRRYFTPSELEALTQS
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
VRERGVLQPLLVRPAPDGSGYEIAAGERRYRAALAAGLPDVPVLIRPLSDEQMLEVGLVE
HHHCCCCCHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
NLQRENLNPLDEVEGTLRLLALRLNVTPEEARQRMMVALRRPTEADLQIFEQVFTLLGRE
HHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHH
SWESFAKNKLRVLQWPPEVLEAMRERGLAYSLAAVVAAAPAEHRAHLLEEALGGATRQQL
HHHHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
RERLAALKPAPVGSRINVREVQRLGRTLGNSKWLQTLSAQQQVELDRWLRKMPEWVRDTQ
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKR
CCC
>Mature Secondary Structure 
TRRRPERRGDLAGLLGRAQDLTQPAETDTRRVALSELRPHGGQPRRYFTPSELEALTQS
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
VRERGVLQPLLVRPAPDGSGYEIAAGERRYRAALAAGLPDVPVLIRPLSDEQMLEVGLVE
HHHCCCCCHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
NLQRENLNPLDEVEGTLRLLALRLNVTPEEARQRMMVALRRPTEADLQIFEQVFTLLGRE
HHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHH
SWESFAKNKLRVLQWPPEVLEAMRERGLAYSLAAVVAAAPAEHRAHLLEEALGGATRQQL
HHHHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
RERLAALKPAPVGSRINVREVQRLGRTLGNSKWLQTLSAQQQVELDRWLRKMPEWVRDTQ
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]