| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971941
Identifier: 94971941
GI number: 94971941
Start: 3798
End: 4109
Strand: Direct
Name: 94971941
Synonym: Dgeo_2473
Alternate gene names: NA
Gene position: 3798-4109 (Clockwise)
Preceding gene: 94971942
Following gene: 94971940
Centisome position: 0.66
GC content: 64.74
Gene sequence:
>312_bases ATGTCTGCCTACGCCAATCCCTGCCTGCTAACCCAGACGCAACTGCTTGATCTCTCCTTTCTGGAACACCGTGCCCAGCT GCTCGCGCTGGCGGCCTTTCTGGACCGGCTGGACCGGGCGCAAGGGGCTGAAGACGATTTCCGGCTGCTGGCTTTCCGCG AAGCCCTCGAGGTGCTGACCTCCCCCGAGCCCGGCCGGGTCAAGCGAGCGCAGATGATCCTGAGCGATCAGAACCTCGAC CTCCTCGACCTGCGCGACTCGCAGAGTGCTTTCGGCGCCTCGAAGCGGCCCAACGCGGAGGTGGAACAGTGA
Upstream 100 bases:
>100_bases CCGTCGGCCAGATGACCGAGGTGCATGAGCTGGATCTCGGCCTGCTGCGCCGCAGTGTTGGCCTGCTCAAAGACCTGCAC GACCACCACTCAGGAGCGAT
Downstream 100 bases:
>100_bases ACTACATCGACCTGCATGCGCATATGATCTCGCGCACAACCGACGACTACCACAAGATGGCCCTGACCGGCTGCCTCGCC GTGACCGAACCTGCCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSAYANPCLLTQTQLLDLSFLEHRAQLLALAAFLDRLDRAQGAEDDFRLLAFREALEVLTSPEPGRVKRAQMILSDQNLD LLDLRDSQSAFGASKRPNAEVEQ
Sequences:
>Translated_103_residues MSAYANPCLLTQTQLLDLSFLEHRAQLLALAAFLDRLDRAQGAEDDFRLLAFREALEVLTSPEPGRVKRAQMILSDQNLD LLDLRDSQSAFGASKRPNAEVEQ >Mature_102_residues SAYANPCLLTQTQLLDLSFLEHRAQLLALAAFLDRLDRAQGAEDDFRLLAFREALEVLTSPEPGRVKRAQMILSDQNLDL LDLRDSQSAFGASKRPNAEVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11530; Mature: 11399
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYANPCLLTQTQLLDLSFLEHRAQLLALAAFLDRLDRAQGAEDDFRLLAFREALEVLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC SPEPGRVKRAQMILSDQNLDLLDLRDSQSAFGASKRPNAEVEQ CCCCCCHHHHHHHHCCCCCCEEECCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure SAYANPCLLTQTQLLDLSFLEHRAQLLALAAFLDRLDRAQGAEDDFRLLAFREALEVLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC SPEPGRVKRAQMILSDQNLDLLDLRDSQSAFGASKRPNAEVEQ CCCCCCHHHHHHHHCCCCCCEEECCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA