Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94971939

Identifier: 94971939

GI number: 94971939

Start: 4939

End: 6141

Strand: Direct

Name: 94971939

Synonym: Dgeo_2471

Alternate gene names: NA

Gene position: 4939-6141 (Clockwise)

Preceding gene: 94971940

Following gene: 94971938

Centisome position: 0.86

GC content: 62.76

Gene sequence:

>1203_bases
ATGCAGCTTCCCGGTGGGGTGCAGCTCACCTACTGCACCAATCTTCATGCTGCCTCCAGCCTCGACGAGGTGCGTGCCAA
TTTGGACCGCTACGCGGTGCCACTCAAGGCCCGCCTCTCGCCGAATGCGCCCTTCGGCATCGGCCTGCGCCTTTCCGGCC
AGGAAAGTGCAGAACTGCTGGAGGGGCAGGCACTCGCAGCCTTCAAAGCGTTTCTGGACGAACGGGGCCTCTACGTCTTC
ACCCTCAACGGCTTTCCCTATGGCCCCTTTCACGGTCAGCCGGTCAAGACCCAGGTTCACGCGCCCGACTGGCGGGACGC
AGAACGGGTCGCCTATACCCAGCGCCTGGCCGAGATTCTGGCCTTTTTGCTGCCAGAAGGCGGTGAAGGCGGCATTTCGA
CGAGTCCGCTCTCGTACCGGGGATGGGTAGAGGCTGACAGCCGCTCAGCCTGGATCCAGATGACCGGGAACCTGGTGCGG
GTGGTGGAGACCCTGATTCGCCTGCGTCAGCGGTGGGGCCGCTTCATTCACCTCGACCTCGAACCCGAACCGGACGGACT
GCTGCAATGCAGTGATGATCTGGCCCGGTTTTTCCGGGAACATCTGCTGGGAGGCGGCGCGCGTGATCTTGCGGCTCGCC
TGGGAATCGACGTAGAGCAGGCCCGCGCGTATCTGAGAGACCACGTACAGGTCTGTTTTGACACCTGCCATGTGGCGGTG
ATGTACGAAGACCCGGCCCAGGCACTGCAAACCTACGAACAGGTGGGCCTGCGCATCGGCAAGGTGCAGATCAGCTCGGC
CCTGCGCTTGCCGCTGCCTCCCGATCCTGAAGCGCGGTTGGACGGAGCGCGAGCGCTGGTGCCTTTCGTGGAGGACACCT
ACCTGCATCAGGTGATTGGGCGGAGCAGGGACGGAAAGATCGTCCAGTACCCCGACCTGCCACCCGCGTTGGCCCACGTG
CGCGACCCACAGGTGACAGAGTGGCGGATCCACTTCCATATTCCGGTCTTCCTGGAACGTGCCGGACTCTTTGCCTCAAC
CCAACCGGAGATTGTCAAAACGCTGGCGCTGCTGCGCGAGAAGGGCTTTACCCGGCATCTGGAAATCGAAACCTATACCT
GGGACGTGCTGCCGGAAGCGCTGAAGTTGCCGCTGCTGTGCTCCATCGAGCGGGAATACCGTTGGGTGATGGATGTCCTC
TAG

Upstream 100 bases:

>100_bases
TGATCGAGCGGATCGTGCTCGACAATCCGGGGCGGTTCTTGAGTCAGTCGCCCAAGTTCAGGCCGGTGCGGAGCGGGCGC
CGGGCAGTGGCGGCGGACTG

Downstream 100 bases:

>100_bases
CACATTGCGTCCCGCTTGGCGCCAGCGACTGTACGGGCACCTGTCACTGGCTCGCGTCTCCAACAGTCCCACGGTGGTCT
CTAACGTGCTTGCGGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MQLPGGVQLTYCTNLHAASSLDEVRANLDRYAVPLKARLSPNAPFGIGLRLSGQESAELLEGQALAAFKAFLDERGLYVF
TLNGFPYGPFHGQPVKTQVHAPDWRDAERVAYTQRLAEILAFLLPEGGEGGISTSPLSYRGWVEADSRSAWIQMTGNLVR
VVETLIRLRQRWGRFIHLDLEPEPDGLLQCSDDLARFFREHLLGGGARDLAARLGIDVEQARAYLRDHVQVCFDTCHVAV
MYEDPAQALQTYEQVGLRIGKVQISSALRLPLPPDPEARLDGARALVPFVEDTYLHQVIGRSRDGKIVQYPDLPPALAHV
RDPQVTEWRIHFHIPVFLERAGLFASTQPEIVKTLALLREKGFTRHLEIETYTWDVLPEALKLPLLCSIEREYRWVMDVL

Sequences:

>Translated_400_residues
MQLPGGVQLTYCTNLHAASSLDEVRANLDRYAVPLKARLSPNAPFGIGLRLSGQESAELLEGQALAAFKAFLDERGLYVF
TLNGFPYGPFHGQPVKTQVHAPDWRDAERVAYTQRLAEILAFLLPEGGEGGISTSPLSYRGWVEADSRSAWIQMTGNLVR
VVETLIRLRQRWGRFIHLDLEPEPDGLLQCSDDLARFFREHLLGGGARDLAARLGIDVEQARAYLRDHVQVCFDTCHVAV
MYEDPAQALQTYEQVGLRIGKVQISSALRLPLPPDPEARLDGARALVPFVEDTYLHQVIGRSRDGKIVQYPDLPPALAHV
RDPQVTEWRIHFHIPVFLERAGLFASTQPEIVKTLALLREKGFTRHLEIETYTWDVLPEALKLPLLCSIEREYRWVMDVL
>Mature_400_residues
MQLPGGVQLTYCTNLHAASSLDEVRANLDRYAVPLKARLSPNAPFGIGLRLSGQESAELLEGQALAAFKAFLDERGLYVF
TLNGFPYGPFHGQPVKTQVHAPDWRDAERVAYTQRLAEILAFLLPEGGEGGISTSPLSYRGWVEADSRSAWIQMTGNLVR
VVETLIRLRQRWGRFIHLDLEPEPDGLLQCSDDLARFFREHLLGGGARDLAARLGIDVEQARAYLRDHVQVCFDTCHVAV
MYEDPAQALQTYEQVGLRIGKVQISSALRLPLPPDPEARLDGARALVPFVEDTYLHQVIGRSRDGKIVQYPDLPPALAHV
RDPQVTEWRIHFHIPVFLERAGLFASTQPEIVKTLALLREKGFTRHLEIETYTWDVLPEALKLPLLCSIEREYRWVMDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45046; Mature: 45046

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPGGVQLTYCTNLHAASSLDEVRANLDRYAVPLKARLSPNAPFGIGLRLSGQESAELL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCHHHHHH
EGQALAAFKAFLDERGLYVFTLNGFPYGPFHGQPVKTQVHAPDWRDAERVAYTQRLAEIL
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
AFLLPEGGEGGISTSPLSYRGWVEADSRSAWIQMTGNLVRVVETLIRLRQRWGRFIHLDL
HHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEC
EPEPDGLLQCSDDLARFFREHLLGGGARDLAARLGIDVEQARAYLRDHVQVCFDTCHVAV
CCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEE
MYEDPAQALQTYEQVGLRIGKVQISSALRLPLPPDPEARLDGARALVPFVEDTYLHQVIG
EECCHHHHHHHHHHHCCEEEEEEEECEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
RSRDGKIVQYPDLPPALAHVRDPQVTEWRIHFHIPVFLERAGLFASTQPEIVKTLALLRE
CCCCCCEEECCCCCHHHHHCCCCCCEEEEEEEEEEEHHECCCCCCCCCHHHHHHHHHHHH
KGFTRHLEIETYTWDVLPEALKLPLLCSIEREYRWVMDVL
CCCCEEEEEEEEEHHHCHHHHCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MQLPGGVQLTYCTNLHAASSLDEVRANLDRYAVPLKARLSPNAPFGIGLRLSGQESAELL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCHHHHHH
EGQALAAFKAFLDERGLYVFTLNGFPYGPFHGQPVKTQVHAPDWRDAERVAYTQRLAEIL
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
AFLLPEGGEGGISTSPLSYRGWVEADSRSAWIQMTGNLVRVVETLIRLRQRWGRFIHLDL
HHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEC
EPEPDGLLQCSDDLARFFREHLLGGGARDLAARLGIDVEQARAYLRDHVQVCFDTCHVAV
CCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEE
MYEDPAQALQTYEQVGLRIGKVQISSALRLPLPPDPEARLDGARALVPFVEDTYLHQVIG
EECCHHHHHHHHHHHCCEEEEEEEECEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
RSRDGKIVQYPDLPPALAHVRDPQVTEWRIHFHIPVFLERAGLFASTQPEIVKTLALLRE
CCCCCCEEECCCCCHHHHHCCCCCCEEEEEEEEEEEHHECCCCCCCCCHHHHHHHHHHHH
KGFTRHLEIETYTWDVLPEALKLPLLCSIEREYRWVMDVL
CCCCEEEEEEEEEHHHCHHHHCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA