Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94971938

Identifier: 94971938

GI number: 94971938

Start: 6131

End: 7000

Strand: Direct

Name: 94971938

Synonym: Dgeo_2470

Alternate gene names: NA

Gene position: 6131-7000 (Clockwise)

Preceding gene: 94971939

Following gene: 94971937

Centisome position: 1.07

GC content: 65.86

Gene sequence:

>870_bases
ATGTCCTCTAGCACATTGCGTCCCGCTTGGCGCCAGCGACTGTACGGGCACCTGTCACTGGCTCGCGTCTCCAACAGTCC
CACGGTGGTCTCTAACGTGCTTGCGGGTGCAGCGCTGGCGGGTGGAGCTGGGCTTCCGCTGGTCCTCCTGGCCGCGGCAA
TGCTGCTGTTTTACACCGCTGGGATGTATCTCAATGATCTCCTCGATCTCCGGACCGACCGCCGCGAACGTCCCGAGCGC
CCGCTGCCTTCCGGCCTGATTTTGCCGGGCGAGGCCTGGGTGGTCACCGCCGGCTTGTTTGGACTGGGCGGATGGCTGCT
GTGGCTGGCGGGAGGCGCGGCCTTTCTGAGCGGCCTGGTCCTGCTGGGCCTGATTGTGCTGTATGACGCCTGGCACAAGA
CCAACCCGCTCAGTCCTCTGGTGATGGGGCTTACCCGCGCGCTGGTGTATGTCACGGCGGCTTTTGCCTTCGTGTCGCAC
CTCAGCTCATCCCTGCTGATCTGGAGCGCACTGCTTACGCTCTATGTGGCTGGGCTGACCTACGTTGCCAAGACCGAGCA
CCGTTCCGGCCCGGCGCGTTTCTGGCCGGTTGCACTGGTGCTGGCGCCCGCTGTGTATGCGTATGTGGGGGGCTTTGCCT
GGCCGGTATGGATGCTGGCCCTGTTGCTGGCGGCCTGGGTGGGCCGCAGTCTGACCTTCGTCTACGGTCCCCAGCGCAAT
ATCGGCGGCGCGGTGGGTCGGATGATTGCCGGAATTTCGCTGCTAGATGCCCTGGTGCTGGGGGGAGCGGGCGCGTGGGC
GCTGCTGCCCTGGGCACTGGCCGCCTTCGCTCTGACCCGCTGGTGGCAGCGGCACATCCAAGGAACCTGA

Upstream 100 bases:

>100_bases
CGGCATCTGGAAATCGAAACCTATACCTGGGACGTGCTGCCGGAAGCGCTGAAGTTGCCGCTGCTGTGCTCCATCGAGCG
GGAATACCGTTGGGTGATGG

Downstream 100 bases:

>100_bases
GATGCCAAGAACTGCTGTGATCAACGTCGTCGGCCTCAGCCCTCAGCTGTTGGGGCCTCAGCTGCCGCGTCTGACTGCCT
TTGCTGGGCGAGGAAAACTG

Product: UbiA prenyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTAGMYLNDLLDLRTDRRERPER
PLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLVLLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSH
LSSSLLIWSALLTLYVAGLTYVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN
IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT

Sequences:

>Translated_289_residues
MSSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTAGMYLNDLLDLRTDRRERPER
PLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLVLLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSH
LSSSLLIWSALLTLYVAGLTYVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN
IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT
>Mature_288_residues
SSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTAGMYLNDLLDLRTDRRERPERP
LPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLVLLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSHL
SSSLLIWSALLTLYVAGLTYVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRNI
GGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT

Specific function: Unknown

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30914; Mature: 30783

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTA
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GMYLNDLLDLRTDRRERPERPLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLV
HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSHLSSSLLIWSALLTLYVAGLT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTA
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GMYLNDLLDLRTDRRERPERPLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLV
HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSHLSSSLLIWSALLTLYVAGLT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA