| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
Click here to switch to the map view.
The map label for this gene is 94971938
Identifier: 94971938
GI number: 94971938
Start: 6131
End: 7000
Strand: Direct
Name: 94971938
Synonym: Dgeo_2470
Alternate gene names: NA
Gene position: 6131-7000 (Clockwise)
Preceding gene: 94971939
Following gene: 94971937
Centisome position: 1.07
GC content: 65.86
Gene sequence:
>870_bases ATGTCCTCTAGCACATTGCGTCCCGCTTGGCGCCAGCGACTGTACGGGCACCTGTCACTGGCTCGCGTCTCCAACAGTCC CACGGTGGTCTCTAACGTGCTTGCGGGTGCAGCGCTGGCGGGTGGAGCTGGGCTTCCGCTGGTCCTCCTGGCCGCGGCAA TGCTGCTGTTTTACACCGCTGGGATGTATCTCAATGATCTCCTCGATCTCCGGACCGACCGCCGCGAACGTCCCGAGCGC CCGCTGCCTTCCGGCCTGATTTTGCCGGGCGAGGCCTGGGTGGTCACCGCCGGCTTGTTTGGACTGGGCGGATGGCTGCT GTGGCTGGCGGGAGGCGCGGCCTTTCTGAGCGGCCTGGTCCTGCTGGGCCTGATTGTGCTGTATGACGCCTGGCACAAGA CCAACCCGCTCAGTCCTCTGGTGATGGGGCTTACCCGCGCGCTGGTGTATGTCACGGCGGCTTTTGCCTTCGTGTCGCAC CTCAGCTCATCCCTGCTGATCTGGAGCGCACTGCTTACGCTCTATGTGGCTGGGCTGACCTACGTTGCCAAGACCGAGCA CCGTTCCGGCCCGGCGCGTTTCTGGCCGGTTGCACTGGTGCTGGCGCCCGCTGTGTATGCGTATGTGGGGGGCTTTGCCT GGCCGGTATGGATGCTGGCCCTGTTGCTGGCGGCCTGGGTGGGCCGCAGTCTGACCTTCGTCTACGGTCCCCAGCGCAAT ATCGGCGGCGCGGTGGGTCGGATGATTGCCGGAATTTCGCTGCTAGATGCCCTGGTGCTGGGGGGAGCGGGCGCGTGGGC GCTGCTGCCCTGGGCACTGGCCGCCTTCGCTCTGACCCGCTGGTGGCAGCGGCACATCCAAGGAACCTGA
Upstream 100 bases:
>100_bases CGGCATCTGGAAATCGAAACCTATACCTGGGACGTGCTGCCGGAAGCGCTGAAGTTGCCGCTGCTGTGCTCCATCGAGCG GGAATACCGTTGGGTGATGG
Downstream 100 bases:
>100_bases GATGCCAAGAACTGCTGTGATCAACGTCGTCGGCCTCAGCCCTCAGCTGTTGGGGCCTCAGCTGCCGCGTCTGACTGCCT TTGCTGGGCGAGGAAAACTG
Product: UbiA prenyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTAGMYLNDLLDLRTDRRERPER PLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLVLLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSH LSSSLLIWSALLTLYVAGLTYVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT
Sequences:
>Translated_289_residues MSSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTAGMYLNDLLDLRTDRRERPER PLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLVLLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSH LSSSLLIWSALLTLYVAGLTYVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT >Mature_288_residues SSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTAGMYLNDLLDLRTDRRERPERP LPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLVLLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSHL SSSLLIWSALLTLYVAGLTYVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRNI GGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT
Specific function: Unknown
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30914; Mature: 30783
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GMYLNDLLDLRTDRRERPERPLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLV HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSHLSSSLLIWSALLTLYVAGLT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSSTLRPAWRQRLYGHLSLARVSNSPTVVSNVLAGAALAGGAGLPLVLLAAAMLLFYTA CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GMYLNDLLDLRTDRRERPERPLPSGLILPGEAWVVTAGLFGLGGWLLWLAGGAAFLSGLV HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGLIVLYDAWHKTNPLSPLVMGLTRALVYVTAAFAFVSHLSSSLLIWSALLTLYVAGLT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVAKTEHRSGPARFWPVALVLAPAVYAYVGGFAWPVWMLALLLAAWVGRSLTFVYGPQRN HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC IGGAVGRMIAGISLLDALVLGGAGAWALLPWALAAFALTRWWQRHIQGT CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA