| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is hyuA [H]
Identifier: 94971910
GI number: 94971910
Start: 41764
End: 43848
Strand: Direct
Name: hyuA [H]
Synonym: Dgeo_2442
Alternate gene names: 94971910
Gene position: 41764-43848 (Clockwise)
Preceding gene: 94971911
Following gene: 94971904
Centisome position: 7.27
GC content: 67.19
Gene sequence:
>2085_bases TTGACCGCGGCTACAGATCCCCCGGGGTCCATTCCGGTGCGGATTGGCATCGATGTGGGCGGCACCTTTACCAAGGGTGT CGCTCTCGATCCCGAGGGGCGCATGCTTGCGGTGTCCCACGTGCCCACCACGCACGGCCACGAACATGGCGTTGCCAACG GTGTCCTCCAAGCCCTGCGGGCGCTGCTGCGTGACTTGCCGCCCACAGCTGTTCCGGTGCTGATTGCTCACTCCACCACG CAGGCCACCAATGCCCTGCTGGAGGGGGACACGGCCTTGGTCGGGATCCTTGCCCTGGGCGAAGTGCGCGACGAGCGGCG TATCAGGAAGGTCACGCGACCCCCGATGGGCCTGCGTGCGCTCCAGGCGTTTGTGGCGACCGATCGGCCTGGTTTCGAGG AGCGGGTTCAGACCGTGCTGAAAGACTGGAGGAGCCGGAAGGTCGGGGCGGTGGCCGTCTCGCAGGCATTCGGTGTGGAC GACCCTCGCTTTGAGCGGCGCGCGGGGGAACTGGCAAGGGAGGCGGGCTTACCCGTCAGCCTCGGCAGTGATCTATCGGG CGCCTACGGATTGGAGATGCGCACCCTGTCCGCCACCGTGAATGCCAGCATCCTCCCGACGATGGTGCGCACGGCCGAGC ACGTCCGGAGAGCGGTGGGTGAGCTTCTGCCAGACGTACCGCTCCTGATCGTCCGCGGAGACGGCGGCGCGGCCGATCTG CGCGCCTTTGAGGAAATGCCGCTGCATACCGTGGTGAGTGGTCCTGCCGCGAGTCTGAGTGGAGCGATTCTCACGCACGG CGTGATGGACGGCGTGTTCTTTGAGGTGGGCGGCACGAGTACGAACATTGGCGTGATCAAAGACGGGCGGCCCGCCCTGA AGTACATGACGGTGATGGACGTACCGACTGGGCTACGTGCCGCGGACATCCGCATTGCTGGCGTTGCGGGTGGCAGCTTG GTGCGGTTGCGTGGGCGCCGGATCGAGGATGTTGGCCCAAGAAGTGCTCACATTGCAGGGTTGCCGTATGCGAGCTTCGT GTCACCAGACCGTCTGGCGCATGCACGGGTTGAGCGCCTCGCTCCCCGTCCTGGCGACCCGGCAGACTATGCGGTGCTTC AGACGCCCGACGGGTCGCGGTTCGCGATCACCCCGACGTGCGCCGCGAACGCTCTGGGCGCCATTCCCGAGGGTGCCTCT GCCTATGCCGTTCCCGAGAGTGCTCGGCTCGCGCTCGGTCTACTGGGGCAGGCCCTCGGCGCCGGGATGGAAGCGGCCGC CCACGCCGTGCTGGAAGCCAGCGCGGAGAAGCTGATGGGCACTGTACAGGCGCTCGTGCGCGAGTACGGGCTGCGCGGCA CGCCTCTGTATGGCGGCGGCGGCGCGGCCAGCGTGCTTGGTCCAGTCGTCGCCCGCCGCTTGAATGCTCCCTTCATCCCA ATTCCGCACAGCGACGTGATTTCGTCTATTGGGGCAGCTCTCGCCGTCATTCGGGTGGAACGAGAGCGCAGCGTGACCCG CCAGGATCCCGCCGTTGCGGATCTCCTCGAGCGCGAGGTGGGCGAGGAGGCCGTGCGGCTGGGCGCTGACCCCGCCTCAC TGCGCATCGACCTAGAGTACAGGGCCCGTGAAGGCCGCCTGCTGGCCGTCGCGATCGGTGCCCATCCGCTGAGCACCCAT ACCCGCCTGCTTGACGCAGACGAGTTGTGGCAGCAGGCCCGGCAGGTGCTGGGAGGCCAGGCCCAACCGGTGTTCGGCAG TCCCCATCACATGTTGTTTGTCGCTGCCCGTAGCCGGCGCGGCCTGTTGCGGCGAGGCGAACAGCACGCCGCCCTCGTTC TTGATCGGCGCGGGGTACGGCTGCTGCGCTTCGAGAACGCACAGGTCCTCACCGGTCATCCGCACGAGGTGCTGGAACGG TTGTGCGCACGGCTTGCAAAACGCGCTATCGCGCCGCATGTCGTCGCCCTGACCACCTCCCGGGTGCGGGATTACGCCCA CCTGCACGACCCGGCCCTGCTGTTGCAGCAACTTGCTGAGAACCTGCAACTGGAGGACCAGGTCGCGCTCATTGTCGAGC CGTGA
Upstream 100 bases:
>100_bases CTGATGGTTCTGGTGTACGTCGTGGGTGTTATTGTGTTCCGCCTGCGCACACAGCGCCGGGCGGAGCGCGGAGCACACAC GTGATGGCGGAGGCTCAGCG
Downstream 100 bases:
>100_bases GTTTTGGGGCCGGAGCTGCTCTCAACACGCGCACTGCGGGCCAGGAGCAGAACATTTGCCAAAGGCGCTGGGGTTAGGGC ACGCGAACCTGGAAACACAC
Product: hydantoinase/oxoprolinase
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MTAATDPPGSIPVRIGIDVGGTFTKGVALDPEGRMLAVSHVPTTHGHEHGVANGVLQALRALLRDLPPTAVPVLIAHSTT QATNALLEGDTALVGILALGEVRDERRIRKVTRPPMGLRALQAFVATDRPGFEERVQTVLKDWRSRKVGAVAVSQAFGVD DPRFERRAGELAREAGLPVSLGSDLSGAYGLEMRTLSATVNASILPTMVRTAEHVRRAVGELLPDVPLLIVRGDGGAADL RAFEEMPLHTVVSGPAASLSGAILTHGVMDGVFFEVGGTSTNIGVIKDGRPALKYMTVMDVPTGLRAADIRIAGVAGGSL VRLRGRRIEDVGPRSAHIAGLPYASFVSPDRLAHARVERLAPRPGDPADYAVLQTPDGSRFAITPTCAANALGAIPEGAS AYAVPESARLALGLLGQALGAGMEAAAHAVLEASAEKLMGTVQALVREYGLRGTPLYGGGGAASVLGPVVARRLNAPFIP IPHSDVISSIGAALAVIRVERERSVTRQDPAVADLLEREVGEEAVRLGADPASLRIDLEYRAREGRLLAVAIGAHPLSTH TRLLDADELWQQARQVLGGQAQPVFGSPHHMLFVAARSRRGLLRRGEQHAALVLDRRGVRLLRFENAQVLTGHPHEVLER LCARLAKRAIAPHVVALTTSRVRDYAHLHDPALLLQQLAENLQLEDQVALIVEP
Sequences:
>Translated_694_residues MTAATDPPGSIPVRIGIDVGGTFTKGVALDPEGRMLAVSHVPTTHGHEHGVANGVLQALRALLRDLPPTAVPVLIAHSTT QATNALLEGDTALVGILALGEVRDERRIRKVTRPPMGLRALQAFVATDRPGFEERVQTVLKDWRSRKVGAVAVSQAFGVD DPRFERRAGELAREAGLPVSLGSDLSGAYGLEMRTLSATVNASILPTMVRTAEHVRRAVGELLPDVPLLIVRGDGGAADL RAFEEMPLHTVVSGPAASLSGAILTHGVMDGVFFEVGGTSTNIGVIKDGRPALKYMTVMDVPTGLRAADIRIAGVAGGSL VRLRGRRIEDVGPRSAHIAGLPYASFVSPDRLAHARVERLAPRPGDPADYAVLQTPDGSRFAITPTCAANALGAIPEGAS AYAVPESARLALGLLGQALGAGMEAAAHAVLEASAEKLMGTVQALVREYGLRGTPLYGGGGAASVLGPVVARRLNAPFIP IPHSDVISSIGAALAVIRVERERSVTRQDPAVADLLEREVGEEAVRLGADPASLRIDLEYRAREGRLLAVAIGAHPLSTH TRLLDADELWQQARQVLGGQAQPVFGSPHHMLFVAARSRRGLLRRGEQHAALVLDRRGVRLLRFENAQVLTGHPHEVLER LCARLAKRAIAPHVVALTTSRVRDYAHLHDPALLLQQLAENLQLEDQVALIVEP >Mature_693_residues TAATDPPGSIPVRIGIDVGGTFTKGVALDPEGRMLAVSHVPTTHGHEHGVANGVLQALRALLRDLPPTAVPVLIAHSTTQ ATNALLEGDTALVGILALGEVRDERRIRKVTRPPMGLRALQAFVATDRPGFEERVQTVLKDWRSRKVGAVAVSQAFGVDD PRFERRAGELAREAGLPVSLGSDLSGAYGLEMRTLSATVNASILPTMVRTAEHVRRAVGELLPDVPLLIVRGDGGAADLR AFEEMPLHTVVSGPAASLSGAILTHGVMDGVFFEVGGTSTNIGVIKDGRPALKYMTVMDVPTGLRAADIRIAGVAGGSLV RLRGRRIEDVGPRSAHIAGLPYASFVSPDRLAHARVERLAPRPGDPADYAVLQTPDGSRFAITPTCAANALGAIPEGASA YAVPESARLALGLLGQALGAGMEAAAHAVLEASAEKLMGTVQALVREYGLRGTPLYGGGGAASVLGPVVARRLNAPFIPI PHSDVISSIGAALAVIRVERERSVTRQDPAVADLLEREVGEEAVRLGADPASLRIDLEYRAREGRLLAVAIGAHPLSTHT RLLDADELWQQARQVLGGQAQPVFGSPHHMLFVAARSRRGLLRRGEQHAALVLDRRGVRLLRFENAQVLTGHPHEVLERL CARLAKRAIAPHVVALTTSRVRDYAHLHDPALLLQQLAENLQLEDQVALIVEP
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 73564; Mature: 73432
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATDPPGSIPVRIGIDVGGTFTKGVALDPEGRMLAVSHVPTTHGHEHGVANGVLQALR CCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHH ALLRDLPPTAVPVLIAHSTTQATNALLEGDTALVGILALGEVRDERRIRKVTRPPMGLRA HHHHHCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LQAFVATDRPGFEERVQTVLKDWRSRKVGAVAVSQAFGVDDPRFERRAGELAREAGLPVS HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHCCCCEE LGSDLSGAYGLEMRTLSATVNASILPTMVRTAEHVRRAVGELLPDVPLLIVRGDGGAADL CCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH RAFEEMPLHTVVSGPAASLSGAILTHGVMDGVFFEVGGTSTNIGVIKDGRPALKYMTVMD HHHHHCCCHHEECCCHHHHCCHHHHHHHHHCEEEEECCCCCCEEEEECCCCHHEEEEEEE VPTGLRAADIRIAGVAGGSLVRLRGRRIEDVGPRSAHIAGLPYASFVSPDRLAHARVERL CCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHH APRPGDPADYAVLQTPDGSRFAITPTCAANALGAIPEGASAYAVPESARLALGLLGQALG CCCCCCCCCEEEEECCCCCEEEECCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHC AGMEAAAHAVLEASAEKLMGTVQALVREYGLRGTPLYGGGGAASVLGPVVARRLNAPFIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC IPHSDVISSIGAALAVIRVERERSVTRQDPAVADLLEREVGEEAVRLGADPASLRIDLEY CCCHHHHHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE RAREGRLLAVAIGAHPLSTHTRLLDADELWQQARQVLGGQAQPVFGSPHHMLFVAARSRR ECCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHH GLLRRGEQHAALVLDRRGVRLLRFENAQVLTGHPHEVLERLCARLAKRAIAPHVVALTTS HHHHCCCCCEEEEEECCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHH RVRDYAHLHDPALLLQQLAENLQLEDQVALIVEP HHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure TAATDPPGSIPVRIGIDVGGTFTKGVALDPEGRMLAVSHVPTTHGHEHGVANGVLQALR CCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHH ALLRDLPPTAVPVLIAHSTTQATNALLEGDTALVGILALGEVRDERRIRKVTRPPMGLRA HHHHHCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LQAFVATDRPGFEERVQTVLKDWRSRKVGAVAVSQAFGVDDPRFERRAGELAREAGLPVS HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHCCCCEE LGSDLSGAYGLEMRTLSATVNASILPTMVRTAEHVRRAVGELLPDVPLLIVRGDGGAADL CCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH RAFEEMPLHTVVSGPAASLSGAILTHGVMDGVFFEVGGTSTNIGVIKDGRPALKYMTVMD HHHHHCCCHHEECCCHHHHCCHHHHHHHHHCEEEEECCCCCCEEEEECCCCHHEEEEEEE VPTGLRAADIRIAGVAGGSLVRLRGRRIEDVGPRSAHIAGLPYASFVSPDRLAHARVERL CCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHH APRPGDPADYAVLQTPDGSRFAITPTCAANALGAIPEGASAYAVPESARLALGLLGQALG CCCCCCCCCEEEEECCCCCEEEECCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHC AGMEAAAHAVLEASAEKLMGTVQALVREYGLRGTPLYGGGGAASVLGPVVARRLNAPFIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC IPHSDVISSIGAALAVIRVERERSVTRQDPAVADLLEREVGEEAVRLGADPASLRIDLEY CCCHHHHHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE RAREGRLLAVAIGAHPLSTHTRLLDADELWQQARQVLGGQAQPVFGSPHHMLFVAARSRR ECCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHH GLLRRGEQHAALVLDRRGVRLLRFENAQVLTGHPHEVLERLCARLAKRAIAPHVVALTTS HHHHCCCCCEEEEEECCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHH RVRDYAHLHDPALLLQQLAENLQLEDQVALIVEP HHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]