| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971869
Identifier: 94971869
GI number: 94971869
Start: 86915
End: 87361
Strand: Direct
Name: 94971869
Synonym: Dgeo_2401
Alternate gene names: NA
Gene position: 86915-87361 (Clockwise)
Preceding gene: 94971870
Following gene: 94971868
Centisome position: 15.14
GC content: 70.69
Gene sequence:
>447_bases ATGACCGCGCTAGAGGGACCGCAGGCGGTCGCCTTCGCCCAGAGCGTGCTGGACGCGCAGCCTTTCAGCGTGCTCGTCGG GGCGCGGGTGGAGCAGATGGCCCCCGACGGCGTGGTTGTGCGCGTGCCCTTTCGCCGCGACCTCACCCAGCACCACGGGT TCGCGCACGGGGGCCTGCAGGCCGCGCTCGCCGACATCGCCCTTACCTTTATGGGCGCGGCGGCGCTGGGACCGCGCGTG CTGACCAGCGAATTCAAGATCAATTTCCTGCGGCCCGGCATGGGTGAGGCGCTGGTGGCCCGCGGGAGCATCATCAGTGC CGGGAAGCGGCAGGCGGTGACGCGCTGCGACATCTTCGCCGTCCAGGCCGGCGAGGAAAAGCTGGTTGCCACGGCCCTGG GCACCATCGTGACGGCGGACGTGCCCCCGGCGGGAGGAACCGAATGA
Upstream 100 bases:
>100_bases ACGGCCCGGGGTACGTGCAGCTCACCGTCGCCAACACCATTGAGCTGGAGGGCGCGCCGAAACCCGCCGCCACTGCCGAA ACCGTGATGCGGGTGTACGT
Downstream 100 bases:
>100_bases AGCGGCGCACGCTGCTGGGTGCGGGCCTCGCGGCAGGCCTGGGCTGGCTCCTCCTCGCGCCCACGCGGGTGCGGCCCGTG GCCTGGGAGGGGCCGGGGCT
Product: phenylacetic acid degradation-related protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation Protein; Thioesterase; Thioesterase Family Protein; Phenylacetic Acid Degradation Protein PaaI; Phenylacetic Acid Degradation Protein PAAI; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Domain 1 Protein; Protein Possibly Involved In Aromatic Compounds Catabolism; Phenylacetic Acid Degradation Protein PaaD
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQAALADIALTFMGAAALGPRV LTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFAVQAGEEKLVATALGTIVTADVPPAGGTE
Sequences:
>Translated_148_residues MTALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQAALADIALTFMGAAALGPRV LTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFAVQAGEEKLVATALGTIVTADVPPAGGTE >Mature_147_residues TALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQAALADIALTFMGAAALGPRVL TSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFAVQAGEEKLVATALGTIVTADVPPAGGTE
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15307; Mature: 15176
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQ CCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCHHHHHHHCCCCCCHHH AALADIALTFMGAAALGPRVLTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFA HHHHHHHHHHHHHHHCCCEEEHHHEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHEEEE VQAGEEKLVATALGTIVTADVPPAGGTE EECCCHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure TALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQ CCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCHHHHHHHCCCCCCHHH AALADIALTFMGAAALGPRVLTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFA HHHHHHHHHHHHHHHCCCEEEHHHEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHEEEE VQAGEEKLVATALGTIVTADVPPAGGTE EECCCHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA