| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314860
Identifier: 94314860
GI number: 94314860
Start: 146403
End: 147080
Strand: Reverse
Name: 94314860
Synonym: Rmet_5941
Alternate gene names: NA
Gene position: 147080-146403 (Counterclockwise)
Preceding gene: 94312548
Following gene: 94314859
Centisome position: 5.7
GC content: 64.9
Gene sequence:
>678_bases GTGATCGTCAGTACCACGCCCGGGCATACGCATGTCCGGCTTGCAGCAACTGTCACAGAAGAACTGCTGCAAACCCATGC GCCGGGACCACAGATCCAGCGTGAGAACAAGCGCCGCGTGGAGTTGGGCGGGCGGATGGTGCGCCCCAACCTCATACGAA TGCTCGACCACTTTCACGTGCCGGCACTGATCAGCCAGCCAGATGCCACGTCCCTGTGGGAAGAGGCGGGCTTCGATTCG ATCCAGCCGCTGGCGTTGCTGCCCCACGCCACGACGCGCCGCGGGCTGGCTTTCGACGGTCCGCTGGATGAACTGCTTGA CACACCGATGCTGCGTGACGTGTTCCAGCGGGAGTTTCTGGACCGGCTCCCGCAATATCCCCGGGACGCCCTCTACATCG GACTTGGGCGCACGGCATGGTCCGGACTCGAACACGCCGTCCGAGCGGGGCTGCTCCGCCAGCAACAACTGCTGGGCATG ATGCCCGTCCCCACACGGGCCGGCAGCATGGTGCGCTACTTCCTGCGCGAGGTCCGGGAAGCCGATCTTTCCCCCAACGA TCCGGTCCGGCATCGCATTGCCTGGCTCGATGCCGCCCATCGGGAAATGGAAGCTGGCGTGGAACGGTTGCGCACCGAAT CGATACCTTCGGCACAACCTCGCCGGCTCACCGCCTGA
Upstream 100 bases:
>100_bases CGCGCGAGGTCTTGCGGAAAAACCCGTCGTCATCGGCCAGGACAACATCTACGCGATGCATTACGTGCCGTACGAGTACT GGAACAACAGTGCGCGGCTC
Downstream 100 bases:
>100_bases CCCTGCAACCGAAGTGACCCAGACCCCACGTCGGTAGGGATCAACCCACGCGTCCCACGCCGATATTCCCTCTTGAGGAA TCTGACCTCCTCGCATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MIVSTTPGHTHVRLAATVTEELLQTHAPGPQIQRENKRRVELGGRMVRPNLIRMLDHFHVPALISQPDATSLWEEAGFDS IQPLALLPHATTRRGLAFDGPLDELLDTPMLRDVFQREFLDRLPQYPRDALYIGLGRTAWSGLEHAVRAGLLRQQQLLGM MPVPTRAGSMVRYFLREVREADLSPNDPVRHRIAWLDAAHREMEAGVERLRTESIPSAQPRRLTA
Sequences:
>Translated_225_residues MIVSTTPGHTHVRLAATVTEELLQTHAPGPQIQRENKRRVELGGRMVRPNLIRMLDHFHVPALISQPDATSLWEEAGFDS IQPLALLPHATTRRGLAFDGPLDELLDTPMLRDVFQREFLDRLPQYPRDALYIGLGRTAWSGLEHAVRAGLLRQQQLLGM MPVPTRAGSMVRYFLREVREADLSPNDPVRHRIAWLDAAHREMEAGVERLRTESIPSAQPRRLTA >Mature_225_residues MIVSTTPGHTHVRLAATVTEELLQTHAPGPQIQRENKRRVELGGRMVRPNLIRMLDHFHVPALISQPDATSLWEEAGFDS IQPLALLPHATTRRGLAFDGPLDELLDTPMLRDVFQREFLDRLPQYPRDALYIGLGRTAWSGLEHAVRAGLLRQQQLLGM MPVPTRAGSMVRYFLREVREADLSPNDPVRHRIAWLDAAHREMEAGVERLRTESIPSAQPRRLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25476; Mature: 25476
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSTTPGHTHVRLAATVTEELLQTHAPGPQIQRENKRRVELGGRMVRPNLIRMLDHFHV CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHCCCHHHHHCCEECCHHHHHHHHHHCC PALISQPDATSLWEEAGFDSIQPLALLPHATTRRGLAFDGPLDELLDTPMLRDVFQREFL CHHHCCCCHHHHHHHCCCCCCCCHHHCCCCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHH DRLPQYPRDALYIGLGRTAWSGLEHAVRAGLLRQQQLLGMMPVPTRAGSMVRYFLREVRE HHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ADLSPNDPVRHRIAWLDAAHREMEAGVERLRTESIPSAQPRRLTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIVSTTPGHTHVRLAATVTEELLQTHAPGPQIQRENKRRVELGGRMVRPNLIRMLDHFHV CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHCCCHHHHHCCEECCHHHHHHHHHHCC PALISQPDATSLWEEAGFDSIQPLALLPHATTRRGLAFDGPLDELLDTPMLRDVFQREFL CHHHCCCCHHHHHHHCCCCCCCCHHHCCCCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHH DRLPQYPRDALYIGLGRTAWSGLEHAVRAGLLRQQQLLGMMPVPTRAGSMVRYFLREVRE HHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ADLSPNDPVRHRIAWLDAAHREMEAGVERLRTESIPSAQPRRLTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA