| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314852
Identifier: 94314852
GI number: 94314852
Start: 136637
End: 137380
Strand: Direct
Name: 94314852
Synonym: Rmet_5933
Alternate gene names: NA
Gene position: 136637-137380 (Clockwise)
Preceding gene: 94314847
Following gene: 94314854
Centisome position: 5.3
GC content: 64.11
Gene sequence:
>744_bases ATGCCGTCTATCCTCACCAAAGCCCGGCTGTTGGGGCTGGCGGCCTGTCTGCTGCCAACCGTTCTCCACTGCGTGCCGGT ACGCGCGCAGACGGTGGAGCCGGGGGTTGTATTCTCAACGGCCCGGCCCGGCAGCGGGCTGCCGAGCGGATGGCAGAACA GGCCGGTCTTGCCCGGAAAAAAGATGACCAGCTATGTGCTGGTGGCGGACCAAGGTACCACGGTGCTCGAAGCCGATGCC AGCGGCTCGGCATCCGGGCTGGTACACGAGGGCGACTTCGATCTGAACAAGACACCGGTCGTCTCGTGGCGCTGGAAGGT GGCCGCGCCGATCCAGAATGCCGACAATCGCGTGGCCGACCGCGAGGACTCGCCCGCACGGCTCGTGTTCTTCTTCGGCG GTCAGGTCGACAGCCTGTCGATTGGCGATCGCGCAGAGATGTTCGCGGCCCATGCCCTGGGCGAGAGTCTGCCTTACGCC ACGTTGATGTACATCTGGACCAACAGCGCCGCGCCCGGTACCGTCATCGAGAATCCCCATTCCAGCCGGGTGCAGATGAT CGTGGTTGGTAACGAGGCGGGCAAATGGCAGAGCCTGCGCCGCAATGTCGTCGCCGATTTCGAGAAAGTCTTTCATGAGA AGCCCGGCAAGCTGACCGGCTACGGCATCCTGACCGATACCGACAACACGGGCGGCGTGGCACGCGCCTGGTACGGCGAT ATCAGGTTCTCGCCGCAGAACTAG
Upstream 100 bases:
>100_bases CCGCGTTCTTGTTTTCGACGCCGCGTCGACAGCGATCACGGCAGGCACCTAGAATGCTCGTGTCATCCTCGTCCAACGCA TCCCGACATCAACGGTCACT
Downstream 100 bases:
>100_bases CGGGGCTTATTGCCCGGGCGCTGTCGAGCGCGCGATGGCGTTCCGGATCGACGTCTTCACAGTTTCGGTCAGGCCGGTGG CATCGTCGATACCCGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPSILTKARLLGLAACLLPTVLHCVPVRAQTVEPGVVFSTARPGSGLPSGWQNRPVLPGKKMTSYVLVADQGTTVLEADA SGSASGLVHEGDFDLNKTPVVSWRWKVAAPIQNADNRVADREDSPARLVFFFGGQVDSLSIGDRAEMFAAHALGESLPYA TLMYIWTNSAAPGTVIENPHSSRVQMIVVGNEAGKWQSLRRNVVADFEKVFHEKPGKLTGYGILTDTDNTGGVARAWYGD IRFSPQN
Sequences:
>Translated_247_residues MPSILTKARLLGLAACLLPTVLHCVPVRAQTVEPGVVFSTARPGSGLPSGWQNRPVLPGKKMTSYVLVADQGTTVLEADA SGSASGLVHEGDFDLNKTPVVSWRWKVAAPIQNADNRVADREDSPARLVFFFGGQVDSLSIGDRAEMFAAHALGESLPYA TLMYIWTNSAAPGTVIENPHSSRVQMIVVGNEAGKWQSLRRNVVADFEKVFHEKPGKLTGYGILTDTDNTGGVARAWYGD IRFSPQN >Mature_246_residues PSILTKARLLGLAACLLPTVLHCVPVRAQTVEPGVVFSTARPGSGLPSGWQNRPVLPGKKMTSYVLVADQGTTVLEADAS GSASGLVHEGDFDLNKTPVVSWRWKVAAPIQNADNRVADREDSPARLVFFFGGQVDSLSIGDRAEMFAAHALGESLPYAT LMYIWTNSAAPGTVIENPHSSRVQMIVVGNEAGKWQSLRRNVVADFEKVFHEKPGKLTGYGILTDTDNTGGVARAWYGDI RFSPQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26604; Mature: 26473
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSILTKARLLGLAACLLPTVLHCVPVRAQTVEPGVVFSTARPGSGLPSGWQNRPVLPGK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCC KMTSYVLVADQGTTVLEADASGSASGLVHEGDFDLNKTPVVSWRWKVAAPIQNADNRVAD CCEEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCC REDSPARLVFFFGGQVDSLSIGDRAEMFAAHALGESLPYATLMYIWTNSAAPGTVIENPH CCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEECCC SSRVQMIVVGNEAGKWQSLRRNVVADFEKVFHEKPGKLTGYGILTDTDNTGGVARAWYGD CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECC IRFSPQN EEECCCC >Mature Secondary Structure PSILTKARLLGLAACLLPTVLHCVPVRAQTVEPGVVFSTARPGSGLPSGWQNRPVLPGK CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCC KMTSYVLVADQGTTVLEADASGSASGLVHEGDFDLNKTPVVSWRWKVAAPIQNADNRVAD CCEEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCC REDSPARLVFFFGGQVDSLSIGDRAEMFAAHALGESLPYATLMYIWTNSAAPGTVIENPH CCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEECCC SSRVQMIVVGNEAGKWQSLRRNVVADFEKVFHEKPGKLTGYGILTDTDNTGGVARAWYGD CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECC IRFSPQN EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA