Click here to switch to the map view.

The map label for this gene is ymgE [C]

Identifier: 94314848

GI number: 94314848

Start: 132628

End: 132879

Strand: Reverse

Name: ymgE [C]

Synonym: Rmet_5929

Alternate gene names: 94314848

Gene position: 132879-132628 (Counterclockwise)

Preceding gene: 94314849

Following gene: 94314844

Centisome position: 5.15

GC content: 60.32

Gene sequence:

>252_bases
ATGATGGCATTTCTTGGCACCGTGTTCGTTGGCCTGATCGTCGGTTTGATTGCTAGAGCGATCAAGCCCGGCGACGACAA
GATGGGTTGGATCATGACGATCGTCCTCGGCATTCTGGGGTCGGTGGCGGCGGGTTACGTGGGACGCGCCCTTGGCATGT
ATCAGCCCGGGCAACCGGCCGGCTGGATTGCCTCGGTGATCGGCGCCATCGTTCTGTTGGCGATCTACGATATGGTCCGG
CGCAAAGCCTGA

Upstream 100 bases:

>100_bases
TCGCGCAGCAGGGCCGACAAACCCGGGGATTTGGACCTGTCCGCTTCCCCAGCCGTAACCGCCGGCCCACCGGCGGCCTT
CGCACTTTCAGGAGCGCATC

Downstream 100 bases:

>100_bases
GCCCTGCGCCCTGCGCCATAAACCCGCGGCGATCCCGGAACGGCCGGGATCGCTCAGTTCTCGCAGCGGAGCAGTGTCGC
GTCGCTGCCGGGCGCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transglycosylase Associated Family Protein; Transglycosylase Associated Protein Family; Transglycosylase Associated Protein; Integral Membrane Protein

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MMAFLGTVFVGLIVGLIARAIKPGDDKMGWIMTIVLGILGSVAAGYVGRALGMYQPGQPAGWIASVIGAIVLLAIYDMVR
RKA

Sequences:

>Translated_83_residues
MMAFLGTVFVGLIVGLIARAIKPGDDKMGWIMTIVLGILGSVAAGYVGRALGMYQPGQPAGWIASVIGAIVLLAIYDMVR
RKA
>Mature_83_residues
MMAFLGTVFVGLIVGLIARAIKPGDDKMGWIMTIVLGILGSVAAGYVGRALGMYQPGQPAGWIASVIGAIVLLAIYDMVR
RKA

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8693; Mature: 8693

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAFLGTVFVGLIVGLIARAIKPGDDKMGWIMTIVLGILGSVAAGYVGRALGMYQPGQPA
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GWIASVIGAIVLLAIYDMVRRKA
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMAFLGTVFVGLIVGLIARAIKPGDDKMGWIMTIVLGILGSVAAGYVGRALGMYQPGQPA
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GWIASVIGAIVLLAIYDMVRRKA
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA