| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is phnB [H]
Identifier: 94314844
GI number: 94314844
Start: 126058
End: 126486
Strand: Reverse
Name: phnB [H]
Synonym: Rmet_5925
Alternate gene names: 94314844
Gene position: 126486-126058 (Counterclockwise)
Preceding gene: 94314848
Following gene: 94314843
Centisome position: 4.9
GC content: 61.07
Gene sequence:
>429_bases ATGTCCTCGAAAGTCCAGCCGTATCTGTTTTTCGATGGTCGCGCTGAGGAAGCGGCCGAGTTCTACAAGACCGCCCTGGG CGCGCAGGTTGGCGCCATGCTGCGCTACCGCGATGGCCCCAAGGATGCCGGTCCCGGCTGTGGTCCGGCCGTCATCAACC AAGACAAGATCATGCATATGGCGCTGCAAATCGGCGATGCCGTGATCATGGGGTCCGACGGGGAGGCCAAGGGCAAGACC GAGTTCAAGGGCTTCGGCCTTTCGCTGAACGTGGCCAATGCCGCCGAGTGCGACAAGACGATGGAAAAGCTCGCCGAGGG TGGCCAGATCAACATGCCGCCGTCGCAGACGTTCTTCAGTGAGCGCTTTGGCATGGTCACCGACAAGTTCGGCGTGATGT GGATGGTGATCGCCGGGCCCAAGGAATAA
Upstream 100 bases:
>100_bases ATCCCCCGGACTCTCGCCTAATCTTTGTGGACGCCGTACACAAGTACCGGTTCAGCCCCCCGCCCGGCCGTATTGGGCGC CCAATCCACAGGAGTTATCG
Downstream 100 bases:
>100_bases CCTGGGCCACTGGGCCACTGATCATCGTTGCCGTTCTCCGGCTGGCCGTACCGTACAGTCCCGTACAATGCGCGGCCAAC CGGAGAACACCATGGAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSSKVQPYLFFDGRAEEAAEFYKTALGAQVGAMLRYRDGPKDAGPGCGPAVINQDKIMHMALQIGDAVIMGSDGEAKGKT EFKGFGLSLNVANAAECDKTMEKLAEGGQINMPPSQTFFSERFGMVTDKFGVMWMVIAGPKE
Sequences:
>Translated_142_residues MSSKVQPYLFFDGRAEEAAEFYKTALGAQVGAMLRYRDGPKDAGPGCGPAVINQDKIMHMALQIGDAVIMGSDGEAKGKT EFKGFGLSLNVANAAECDKTMEKLAEGGQINMPPSQTFFSERFGMVTDKFGVMWMVIAGPKE >Mature_141_residues SSKVQPYLFFDGRAEEAAEFYKTALGAQVGAMLRYRDGPKDAGPGCGPAVINQDKIMHMALQIGDAVIMGSDGEAKGKTE FKGFGLSLNVANAAECDKTMEKLAEGGQINMPPSQTFFSERFGMVTDKFGVMWMVIAGPKE
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=136, Percent_Identity=34.5588235294118, Blast_Score=81, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15282; Mature: 15151
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKVQPYLFFDGRAEEAAEFYKTALGAQVGAMLRYRDGPKDAGPGCGPAVINQDKIMHM CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHH ALQIGDAVIMGSDGEAKGKTEFKGFGLSLNVANAAECDKTMEKLAEGGQINMPPSQTFFS HHHHCCEEEECCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHCCCEECCCCCHHHHH ERFGMVTDKFGVMWMVIAGPKE HHCCCEECCCCEEEEEEECCCC >Mature Secondary Structure SSKVQPYLFFDGRAEEAAEFYKTALGAQVGAMLRYRDGPKDAGPGCGPAVINQDKIMHM CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHH ALQIGDAVIMGSDGEAKGKTEFKGFGLSLNVANAAECDKTMEKLAEGGQINMPPSQTFFS HHHHCCEEEECCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHCCCEECCCCCHHHHH ERFGMVTDKFGVMWMVIAGPKE HHCCCEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]