| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314807
Identifier: 94314807
GI number: 94314807
Start: 85769
End: 87154
Strand: Direct
Name: 94314807
Synonym: Rmet_5888
Alternate gene names: NA
Gene position: 85769-87154 (Clockwise)
Preceding gene: 94314804
Following gene: 94314812
Centisome position: 3.32
GC content: 66.38
Gene sequence:
>1386_bases ATGCGGACACGTACGTGGACCACATGGCTCGCCTGTGCGGCGATCGCCATGCTGATGGTGGCATGCGGCGGCGGAGGCGG TAGTTCGGGCTCGGGATCGGCGCCATCCGGCGGCGCGGGCAGTGGCGGTAGCGCCGGCAGCGGCGGCTCCGGCGCGGTGG CGACGTCCTATACGCTGGTGTTGAACCAGACCTCCGGCAAGGTCGCGGTAGGCGACACGATGCCGCTGACTGCGTCAGTC GTTGACAATCTTGGCAATGACGTTACCGGTTCGACCACATTTGCCTGGTCGACCATCAACTCCTCCATCGCCGTCGTGGC GAACGCATCGGTACCGGGCGGCGCGGTGGTGACCGGCGTGGGTCTGGGTATCGCCAACATCAGCGTGGTGGCGACCGTGA CCGGCGCCAATAATGCGACGACCGTGCTGCCACAGGCATCGACGACGATTACGGTGGTTGCGCCGGGCAGCAGGACGTAC AGCCTTGCGCTGCCGTACCCATCGCTTTCGATGACGGACGGACAGACCCTGCGCGTGACGGCATCCCTGATCGACAGCGA CGGCGCGGATCGCTCCGCCAGCGCCACCGGATGGACCTGGCGCAGCACCACGTCGGCGGTGCAGGCCGCAGGCGTGGCCA ATGTCGGCGTGCTGCTTGGCGTCAATGGGGGCAGCACCGTCGCGCTGTCGGTGGTCAGCGTCCAGGTCACGGCGCCGGAT GGCAGCACCCTGACCGGCGCTTTCCCGGTGTCGGTGTTCCCGACCGGGGTGTCGAGCTTCCGGCTCGTGCTGTCGCAGAA CGGCTCGCAGATCAATGCGCTGAACGTGCTCAACGGCTTCCCGCAGACGTACCTCTCACAGGTGGTGCGTAGCGATGGAA ACGATTCGACCCCGGATTTCACCGGCCTGTGGACCTTTACGACCACATCGCCATCGTTGCTCGTGTTGCCGGATTCCTCG ACGCGTCTCACCACGGTCAGCACCGGTCGGCCGAACGGCGCGTCGCCGCTGCAGAGCATTCTTTCGGAGATGGCCAGCAG CTTGACGCTGAGCGCAAAGCCGCGCGCCACGCTGTTTGTCACGGAGCAACCAACGTGGGCGCTGGTCTACAACGGTCCAC AGCCATTGGTGGTGAACCGCCTGGCTGGCGCGACTGTCGCGGTGCAACTGATGCATCGTGGTGTGGATGAGGGCATCACC GGTTGCGGGACGAGCTGGGCGTGGTCGACAACGAGCAGCAACATCGTGGTCGCGCAGTCGGTGCTTGCGCCCAACTCGGC GTCGATCCTGCCGACGGCGGCTGGCCCCTTCTCGGTCACGGCGACGTGCACGGCCGGGGTGGAGGCCATGCCGTTGTCGA TCACGATTCCGGGCACGGCACAGTAA
Upstream 100 bases:
>100_bases TGTGTTGGTTCGCACTCAATCCTCTGGCCGGTATTGCATCCGCCGCATCGCGCCTAGTCTGATTCTGGGAACGGGCCCAA AACTACAAGAGGGGATCATC
Downstream 100 bases:
>100_bases CGCACTCCTGCGAGGTGCGTACCCGTTTCTGCGTACGCTTGCCTCCTTGGTTTGCCCCCCTTTCCCGCTTGCGGGAGAGG GGCCGGGTGAGAGGGAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MRTRTWTTWLACAAIAMLMVACGGGGGSSGSGSAPSGGAGSGGSAGSGGSGAVATSYTLVLNQTSGKVAVGDTMPLTASV VDNLGNDVTGSTTFAWSTINSSIAVVANASVPGGAVVTGVGLGIANISVVATVTGANNATTVLPQASTTITVVAPGSRTY SLALPYPSLSMTDGQTLRVTASLIDSDGADRSASATGWTWRSTTSAVQAAGVANVGVLLGVNGGSTVALSVVSVQVTAPD GSTLTGAFPVSVFPTGVSSFRLVLSQNGSQINALNVLNGFPQTYLSQVVRSDGNDSTPDFTGLWTFTTTSPSLLVLPDSS TRLTTVSTGRPNGASPLQSILSEMASSLTLSAKPRATLFVTEQPTWALVYNGPQPLVVNRLAGATVAVQLMHRGVDEGIT GCGTSWAWSTTSSNIVVAQSVLAPNSASILPTAAGPFSVTATCTAGVEAMPLSITIPGTAQ
Sequences:
>Translated_461_residues MRTRTWTTWLACAAIAMLMVACGGGGGSSGSGSAPSGGAGSGGSAGSGGSGAVATSYTLVLNQTSGKVAVGDTMPLTASV VDNLGNDVTGSTTFAWSTINSSIAVVANASVPGGAVVTGVGLGIANISVVATVTGANNATTVLPQASTTITVVAPGSRTY SLALPYPSLSMTDGQTLRVTASLIDSDGADRSASATGWTWRSTTSAVQAAGVANVGVLLGVNGGSTVALSVVSVQVTAPD GSTLTGAFPVSVFPTGVSSFRLVLSQNGSQINALNVLNGFPQTYLSQVVRSDGNDSTPDFTGLWTFTTTSPSLLVLPDSS TRLTTVSTGRPNGASPLQSILSEMASSLTLSAKPRATLFVTEQPTWALVYNGPQPLVVNRLAGATVAVQLMHRGVDEGIT GCGTSWAWSTTSSNIVVAQSVLAPNSASILPTAAGPFSVTATCTAGVEAMPLSITIPGTAQ >Mature_461_residues MRTRTWTTWLACAAIAMLMVACGGGGGSSGSGSAPSGGAGSGGSAGSGGSGAVATSYTLVLNQTSGKVAVGDTMPLTASV VDNLGNDVTGSTTFAWSTINSSIAVVANASVPGGAVVTGVGLGIANISVVATVTGANNATTVLPQASTTITVVAPGSRTY SLALPYPSLSMTDGQTLRVTASLIDSDGADRSASATGWTWRSTTSAVQAAGVANVGVLLGVNGGSTVALSVVSVQVTAPD GSTLTGAFPVSVFPTGVSSFRLVLSQNGSQINALNVLNGFPQTYLSQVVRSDGNDSTPDFTGLWTFTTTSPSLLVLPDSS TRLTTVSTGRPNGASPLQSILSEMASSLTLSAKPRATLFVTEQPTWALVYNGPQPLVVNRLAGATVAVQLMHRGVDEGIT GCGTSWAWSTTSSNIVVAQSVLAPNSASILPTAAGPFSVTATCTAGVEAMPLSITIPGTAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45758; Mature: 45758
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRTWTTWLACAAIAMLMVACGGGGGSSGSGSAPSGGAGSGGSAGSGGSGAVATSYTLV CCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE LNQTSGKVAVGDTMPLTASVVDNLGNDVTGSTTFAWSTINSSIAVVANASVPGGAVVTGV EECCCCCEEECCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEE GLGIANISVVATVTGANNATTVLPQASTTITVVAPGSRTYSLALPYPSLSMTDGQTLRVT CCCEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEE ASLIDSDGADRSASATGWTWRSTTSAVQAAGVANVGVLLGVNGGSTVALSVVSVQVTAPD EEEECCCCCCCCCCCCCCEECCCHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEEEECCC GSTLTGAFPVSVFPTGVSSFRLVLSQNGSQINALNVLNGFPQTYLSQVVRSDGNDSTPDF CCEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEHHHCCCHHHHHHHHHHCCCCCCCCCE TGLWTFTTTSPSLLVLPDSSTRLTTVSTGRPNGASPLQSILSEMASSLTLSAKPRATLFV EEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEE TEQPTWALVYNGPQPLVVNRLAGATVAVQLMHRGVDEGITGCGTSWAWSTTSSNIVVAQS ECCCCEEEEECCCCCEEEEHHCCHHHHHHHHHCCHHHCCCCCCCCCEECCCCCCEEEEEE VLAPNSASILPTAAGPFSVTATCTAGVEAMPLSITIPGTAQ EECCCCCCEEECCCCCEEEEEEEECCCEEEEEEEECCCCCC >Mature Secondary Structure MRTRTWTTWLACAAIAMLMVACGGGGGSSGSGSAPSGGAGSGGSAGSGGSGAVATSYTLV CCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE LNQTSGKVAVGDTMPLTASVVDNLGNDVTGSTTFAWSTINSSIAVVANASVPGGAVVTGV EECCCCCEEECCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEE GLGIANISVVATVTGANNATTVLPQASTTITVVAPGSRTYSLALPYPSLSMTDGQTLRVT CCCEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEE ASLIDSDGADRSASATGWTWRSTTSAVQAAGVANVGVLLGVNGGSTVALSVVSVQVTAPD EEEECCCCCCCCCCCCCCEECCCHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEEEECCC GSTLTGAFPVSVFPTGVSSFRLVLSQNGSQINALNVLNGFPQTYLSQVVRSDGNDSTPDF CCEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEHHHCCCHHHHHHHHHHCCCCCCCCCE TGLWTFTTTSPSLLVLPDSSTRLTTVSTGRPNGASPLQSILSEMASSLTLSAKPRATLFV EEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEE TEQPTWALVYNGPQPLVVNRLAGATVAVQLMHRGVDEGITGCGTSWAWSTTSSNIVVAQS ECCCCEEEEECCCCCEEEEHHCCHHHHHHHHHCCHHHCCCCCCCCCEECCCCCCEEEEEE VLAPNSASILPTAAGPFSVTATCTAGVEAMPLSITIPGTAQ EECCCCCCEEECCCCCEEEEEEEECCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA