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The map label for this gene is rbn [C]

Identifier: 94314728

GI number: 94314728

Start: 2572333

End: 2573298

Strand: Reverse

Name: rbn [C]

Synonym: Rmet_5809

Alternate gene names: 94314728

Gene position: 2573298-2572333 (Counterclockwise)

Preceding gene: 94314730

Following gene: 94314727

Centisome position: 99.74

GC content: 64.7

Gene sequence:

>966_bases
ATGCCCCCTGAACACGCCCCAAACAACCCGGAGCAGGCTTCCTCGCAACGGGCGCCCAGGCGCTGGCTTCCAGACCGGCA
CACCGGTGGGCGCACCGTGCGCGTGGTGTCGGCCTCAATCAATTCGTGGCTGGACCATCGCGCCGCCAGCAAGGGCGCGG
CGTTGTCCTTCTACATGCTGTTCTCGCTGGCGCCTATCCTGGTGCTGGTCATTTCCATCGCCGGACTGTTCTTCGGCGCC
GAGGCGGCGCGCGGTGAGATCTTCGCGCAGATTCAGGATCTGGTCGGTGCCAAGGGCGCCGCCGCGATCGAGGGCATTCT
GGCCGCCACGCATCGCGCTGGCGGCAGCGGTGTGGCGGCAGTCATTGCCACCGGCATCCTGTTCGTCGGCGCCACCAGCG
CGTTCGCAGAGCTCAAGAGCAGCCTGGACGACATCTGGCATGCGCCGCCGCCGGCCGGCGCTGGCTGGCAGAAGCTGCTG
CGGGCCCGGCTGCTGTCCTTCAGCATCGTTCTGGTACTGGCTTTCATGCTGCTGGTGTCGCTAATCGTGAACGCCGCGCT
GGCCGTGATCGACCGTTTCTGGGGGCAGCTCTGGACGGCCACATGGTTCGCGCCGGTGGCTGAGGGCATCTCGACGCTGT
TTTCGTTCGCCGTCGTTACCGCGCTGTTCGCAGTGATCTTCAAGATGCTGCCGAATGCGCGCATCGCGTGGCGCGACGTG
ATGATGGGCTCCGTCATCACGGCCTTGTTGTTTGCCGTGGGCAAGCGCCTGATCGGCCTGTACCTGGGCAACAGTGCGGT
GGCATCGTCGTACGGGGCGGCCGGATCGGTCGTGGCGCTGATGCTCTGGATCTATTATTCGGCACAAATCTTCTTCTTCG
GTGCCGAACTGACGCGCCAATACGCACTGCAATTCGGTAGTCTGCGCGGTCATGATCCCGCGCAGGAGCGCGAAACGGTA
AAATAG

Upstream 100 bases:

>100_bases
GCCGATGACGGCGGTCGTATTCATCGTGGCGCGGCCGCACGACTTTGACGGTGCCGATCTCTCCACTTATGCTTGGCGAA
GTTACCCAAGGATGAACGCC

Downstream 100 bases:

>100_bases
CGCCCCTGTCCGCCCTCGGGCCAGCCGCGCCCCGGTGCCGCTGCGCCGTTCGGGCCTTTGCCATCACCAGATATCACCTG
CCAGGTTCCCCCAGCCGTGA

Product: ribonuclease BN, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPPEHAPNNPEQASSQRAPRRWLPDRHTGGRTVRVVSASINSWLDHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGA
EAARGEIFAQIQDLVGAKGAAAIEGILAATHRAGGSGVAAVIATGILFVGATSAFAELKSSLDDIWHAPPPAGAGWQKLL
RARLLSFSIVLVLAFMLLVSLIVNAALAVIDRFWGQLWTATWFAPVAEGISTLFSFAVVTALFAVIFKMLPNARIAWRDV
MMGSVITALLFAVGKRLIGLYLGNSAVASSYGAAGSVVALMLWIYYSAQIFFFGAELTRQYALQFGSLRGHDPAQERETV
K

Sequences:

>Translated_321_residues
MPPEHAPNNPEQASSQRAPRRWLPDRHTGGRTVRVVSASINSWLDHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGA
EAARGEIFAQIQDLVGAKGAAAIEGILAATHRAGGSGVAAVIATGILFVGATSAFAELKSSLDDIWHAPPPAGAGWQKLL
RARLLSFSIVLVLAFMLLVSLIVNAALAVIDRFWGQLWTATWFAPVAEGISTLFSFAVVTALFAVIFKMLPNARIAWRDV
MMGSVITALLFAVGKRLIGLYLGNSAVASSYGAAGSVVALMLWIYYSAQIFFFGAELTRQYALQFGSLRGHDPAQERETV
K
>Mature_320_residues
PPEHAPNNPEQASSQRAPRRWLPDRHTGGRTVRVVSASINSWLDHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAE
AARGEIFAQIQDLVGAKGAAAIEGILAATHRAGGSGVAAVIATGILFVGATSAFAELKSSLDDIWHAPPPAGAGWQKLLR
ARLLSFSIVLVLAFMLLVSLIVNAALAVIDRFWGQLWTATWFAPVAEGISTLFSFAVVTALFAVIFKMLPNARIAWRDVM
MGSVITALLFAVGKRLIGLYLGNSAVASSYGAAGSVVALMLWIYYSAQIFFFGAELTRQYALQFGSLRGHDPAQERETVK

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=279, Percent_Identity=23.2974910394265, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 34317; Mature: 34186

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPEHAPNNPEQASSQRAPRRWLPDRHTGGRTVRVVSASINSWLDHRAASKGAALSFYML
CCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHH
FSLAPILVLVISIAGLFFGAEAARGEIFAQIQDLVGAKGAAAIEGILAATHRAGGSGVAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
VIATGILFVGATSAFAELKSSLDDIWHAPPPAGAGWQKLLRARLLSFSIVLVLAFMLLVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIVNAALAVIDRFWGQLWTATWFAPVAEGISTLFSFAVVTALFAVIFKMLPNARIAWRDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MMGSVITALLFAVGKRLIGLYLGNSAVASSYGAAGSVVALMLWIYYSAQIFFFGAELTRQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALQFGSLRGHDPAQERETVK
HHHHHCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
PPEHAPNNPEQASSQRAPRRWLPDRHTGGRTVRVVSASINSWLDHRAASKGAALSFYML
CCCCCCCCHHHHHHHCCCHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHH
FSLAPILVLVISIAGLFFGAEAARGEIFAQIQDLVGAKGAAAIEGILAATHRAGGSGVAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
VIATGILFVGATSAFAELKSSLDDIWHAPPPAGAGWQKLLRARLLSFSIVLVLAFMLLVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIVNAALAVIDRFWGQLWTATWFAPVAEGISTLFSFAVVTALFAVIFKMLPNARIAWRDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MMGSVITALLFAVGKRLIGLYLGNSAVASSYGAAGSVVALMLWIYYSAQIFFFGAELTRQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALQFGSLRGHDPAQERETVK
HHHHHCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA