| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is fecA1 [H]
Identifier: 94314725
GI number: 94314725
Start: 2565959
End: 2568154
Strand: Direct
Name: fecA1 [H]
Synonym: Rmet_5806
Alternate gene names: 94314725
Gene position: 2565959-2568154 (Clockwise)
Preceding gene: 94314721
Following gene: 94314726
Centisome position: 99.45
GC content: 62.52
Gene sequence:
>2196_bases ATGTCGCACCGGGCACATGTCAATGCTTCCCGGATATCCATTGTGCTGCCAGCATTCCGCCTTGCCTTCTGCGCGACCAG CGTCGCGCTTCTCACCCTCCCCCTCTCCTCCCAATCCCAAACCCCACCAGCCGCGAGCGCGGGCAACGAAGCCACGCTCA AGACCGTGACCGTGGTGGGCAACTGGCTTGAGGCCCCAAATGAGGAAAAGGTCCTCGAGCACCCCGGCGCCCGGACCATC ATCGCCCGGGAAGCCATCGCCGAGACAGGGGCCAACAATGTGCGCGATGTGCTGCGCCAGGTGCCTGGTGTCCAGGTACG GGACAACAACGGCACAGGCGGCAGCGATATCTCGCTGAACGTGGGCGTGCGCGGGTTGACCTCGCGGCTCTCCCCCCGTT CGACGATCCTGATGGATGGCGTGCCGGTGGCCGTGGCGCCCTACGGGCAGCCGCAACTGTCCATGGCGCCGCTGTCCCTG GGCAATCTGGAAGCGGTGGACGTGGTCCGTGGCGCGGGTTCGGTGCGATACGGTCCGCAGAACGTCGGCGGCATCATCAG CTTCGTGACACGGGCGATCCCCAAGACCTTCGCGGCCGACGCGTCTGTCTCCACCGACATCTACAGCTACGGCAGCAGCA TCAAGGCCAACCCCACCGCCTTCATCGGCGGCACCAATGACAATGGCCTCGGTGGCGCCCTGCTCTACTCGGGCGTGCAC GGCAGCGGCTATCGCGAGAACAATGACAACGTTGATATCGATGACCTGATGCTCAAGGGCGCCTACCGGATCTCCAAGAC CGACGAACTCTCGGCTGCGTTCCACTACTACGACGCACACGCCGGTATGCCGGGCGGCCTGACACCGCAGCAGTTCGCGG ACGATCCCTTCCAGTCCACACGTCCGTACGACAGTTTCTCGGGCCGGCGCTCTGATTACTCCTTCAAGTACGCGCACAAC GACAACAACCGCAATTTCGAAGTGCTGATGTACTACACCAGCAGCTTCCGCGGGAGCGCGCTGGAGCAACCGCGCAGAAA CACCACGCCACAGCGTCTCCGCCTGACCACCTCGCCACGGAACTACCATGTGTTCGCCATCGAGCCGCGCTACTCGCAAT TGTTCCGCACCGGGAGCATCAGCAACGAGATAAGCGTCGGCTACCGTTACCTGCGCGAGGGCAGCGAGGAAAAAGCCACG CGTACCGCCTTTTACGCCCCGGGCAGCGTCTATGCGCCCGATTTGCCGGCACCCGTGTATCAGTGGCGCACGGGCGGCAC TACGGCCAATGCGTTCTACGTCGACGATACGATCAATGTCGGCAACTGGACCATCACGCCGGGTCTGCGCTACGAATTCA TCCGCACGAACCTGACTGACCACTTCACTGGCGTCAGGCGGGACGTATCGGCCGACGAACCGCTGCCATCGTTGTCCATG CTCTACCACCTCAGCGACAAATGGACGGCATTTGCCAACGCAGGCGTATCGTTCGGTCCGCTGCAGTACTTCCAGATCGC GTCGACCACGAACGGTCTGAAGCCCGAGAAGGCGAAGACCTATGAAATTGGCACGCACTTCGATGGCGTCAACGGCTGGG GCGGGGAGCTAACGCTATTCAATATCGACTTCGATGACGAACTGCAGCTTCAGGGAGGCCGCGGCGGCGCGCTCGATGCG TGGACGAACCTCGGCGCCACCACCCATCGCGGTGTCGAATCGGGCCTGCGCTTCGACTTCGGCTCGCTGACGAATACGCT GGCCGGCCTGACCGCCTATGCCACCTACACGTTCACGGACGCCACCTACCAGCAAGGCGCATTCGCTGGACGCGATCTCC CCTTCTATTCGCGCCATGTGGCCACGCTGGGAATGCGATATGTGCGCAACCGCTGGGCTTTCAATGTGGACGGCTTCGCG CAGTCGAAACAACGCTCGCCAGGCAATCCGGCGCAATCGACTGTGTATCAAACCCAGGAATCGTCAGACGGCGCACTCGG CGACATCCCCGGCTATGCGCTGATGAACGTGCGCGTGGGATACGACTTCGGCAAGACCGCGCAGAACCTGAAGCTGGTGC TCGGCATCAAGAACGTCTTCGATCGCCGCTATTACACGCGCTCCAACGACAACAACCTGGGTATGTACGTGGGTATGCCC CGCACGGTCTATTTGCAGGCGTCGCTGGCGTACTGA
Upstream 100 bases:
>100_bases GCCTTCGGGCAGGAACTTGAGAAAGCACAAAGTAAATGCGAACCATTCGCATTTATACTCGCCCAGCCTTGTGCCTTATG GCTCGCTTTTTGCCACGCCA
Downstream 100 bases:
>100_bases CGATTCCCGAGCACCGGATTGGCAACGCATGCGGTTGGCGCCGCGAACCATGTCGAGCGACAACGGAGGCAAGCCGGGCC GCCTGCAATCTTATATGTAT
Product: ferric citrate outer membrane transporter; KpLE2 phage-like element
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MSHRAHVNASRISIVLPAFRLAFCATSVALLTLPLSSQSQTPPAASAGNEATLKTVTVVGNWLEAPNEEKVLEHPGARTI IAREAIAETGANNVRDVLRQVPGVQVRDNNGTGGSDISLNVGVRGLTSRLSPRSTILMDGVPVAVAPYGQPQLSMAPLSL GNLEAVDVVRGAGSVRYGPQNVGGIISFVTRAIPKTFAADASVSTDIYSYGSSIKANPTAFIGGTNDNGLGGALLYSGVH GSGYRENNDNVDIDDLMLKGAYRISKTDELSAAFHYYDAHAGMPGGLTPQQFADDPFQSTRPYDSFSGRRSDYSFKYAHN DNNRNFEVLMYYTSSFRGSALEQPRRNTTPQRLRLTTSPRNYHVFAIEPRYSQLFRTGSISNEISVGYRYLREGSEEKAT RTAFYAPGSVYAPDLPAPVYQWRTGGTTANAFYVDDTINVGNWTITPGLRYEFIRTNLTDHFTGVRRDVSADEPLPSLSM LYHLSDKWTAFANAGVSFGPLQYFQIASTTNGLKPEKAKTYEIGTHFDGVNGWGGELTLFNIDFDDELQLQGGRGGALDA WTNLGATTHRGVESGLRFDFGSLTNTLAGLTAYATYTFTDATYQQGAFAGRDLPFYSRHVATLGMRYVRNRWAFNVDGFA QSKQRSPGNPAQSTVYQTQESSDGALGDIPGYALMNVRVGYDFGKTAQNLKLVLGIKNVFDRRYYTRSNDNNLGMYVGMP RTVYLQASLAY
Sequences:
>Translated_731_residues MSHRAHVNASRISIVLPAFRLAFCATSVALLTLPLSSQSQTPPAASAGNEATLKTVTVVGNWLEAPNEEKVLEHPGARTI IAREAIAETGANNVRDVLRQVPGVQVRDNNGTGGSDISLNVGVRGLTSRLSPRSTILMDGVPVAVAPYGQPQLSMAPLSL GNLEAVDVVRGAGSVRYGPQNVGGIISFVTRAIPKTFAADASVSTDIYSYGSSIKANPTAFIGGTNDNGLGGALLYSGVH GSGYRENNDNVDIDDLMLKGAYRISKTDELSAAFHYYDAHAGMPGGLTPQQFADDPFQSTRPYDSFSGRRSDYSFKYAHN DNNRNFEVLMYYTSSFRGSALEQPRRNTTPQRLRLTTSPRNYHVFAIEPRYSQLFRTGSISNEISVGYRYLREGSEEKAT RTAFYAPGSVYAPDLPAPVYQWRTGGTTANAFYVDDTINVGNWTITPGLRYEFIRTNLTDHFTGVRRDVSADEPLPSLSM LYHLSDKWTAFANAGVSFGPLQYFQIASTTNGLKPEKAKTYEIGTHFDGVNGWGGELTLFNIDFDDELQLQGGRGGALDA WTNLGATTHRGVESGLRFDFGSLTNTLAGLTAYATYTFTDATYQQGAFAGRDLPFYSRHVATLGMRYVRNRWAFNVDGFA QSKQRSPGNPAQSTVYQTQESSDGALGDIPGYALMNVRVGYDFGKTAQNLKLVLGIKNVFDRRYYTRSNDNNLGMYVGMP RTVYLQASLAY >Mature_730_residues SHRAHVNASRISIVLPAFRLAFCATSVALLTLPLSSQSQTPPAASAGNEATLKTVTVVGNWLEAPNEEKVLEHPGARTII AREAIAETGANNVRDVLRQVPGVQVRDNNGTGGSDISLNVGVRGLTSRLSPRSTILMDGVPVAVAPYGQPQLSMAPLSLG NLEAVDVVRGAGSVRYGPQNVGGIISFVTRAIPKTFAADASVSTDIYSYGSSIKANPTAFIGGTNDNGLGGALLYSGVHG SGYRENNDNVDIDDLMLKGAYRISKTDELSAAFHYYDAHAGMPGGLTPQQFADDPFQSTRPYDSFSGRRSDYSFKYAHND NNRNFEVLMYYTSSFRGSALEQPRRNTTPQRLRLTTSPRNYHVFAIEPRYSQLFRTGSISNEISVGYRYLREGSEEKATR TAFYAPGSVYAPDLPAPVYQWRTGGTTANAFYVDDTINVGNWTITPGLRYEFIRTNLTDHFTGVRRDVSADEPLPSLSML YHLSDKWTAFANAGVSFGPLQYFQIASTTNGLKPEKAKTYEIGTHFDGVNGWGGELTLFNIDFDDELQLQGGRGGALDAW TNLGATTHRGVESGLRFDFGSLTNTLAGLTAYATYTFTDATYQQGAFAGRDLPFYSRHVATLGMRYVRNRWAFNVDGFAQ SKQRSPGNPAQSTVYQTQESSDGALGDIPGYALMNVRVGYDFGKTAQNLKLVLGIKNVFDRRYYTRSNDNNLGMYVGMPR TVYLQASLAY
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=711, Percent_Identity=44.4444444444444, Blast_Score=565, Evalue=1e-162, Organism=Escherichia coli, GI1787723, Length=692, Percent_Identity=24.2774566473988, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788478, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79782; Mature: 79650
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRAHVNASRISIVLPAFRLAFCATSVALLTLPLSSQSQTPPAASAGNEATLKTVTVVG CCCCCCCCCCCEEEEHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE NWLEAPNEEKVLEHPGARTIIAREAIAETGANNVRDVLRQVPGVQVRDNNGTGGSDISLN HHHCCCCCCHHHHCCCCCEEHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEE VGVRGLTSRLSPRSTILMDGVPVAVAPYGQPQLSMAPLSLGNLEAVDVVRGAGSVRYGPQ CCCCHHHHCCCCCCEEEECCCCEEEECCCCCCCEECCCCCCCCCHHHHHHCCCCCCCCCC NVGGIISFVTRAIPKTFAADASVSTDIYSYGSSIKANPTAFIGGTNDNGLGGALLYSGVH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCC GSGYRENNDNVDIDDLMLKGAYRISKTDELSAAFHYYDAHAGMPGGLTPQQFADDPFQST CCCCCCCCCCCCHHHHHHHCCEEECCCCHHHHEEEEEECCCCCCCCCCHHHHCCCCCCCC RPYDSFSGRRSDYSFKYAHNDNNRNFEVLMYYTSSFRGSALEQPRRNTTPQRLRLTTSPR CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCHHCCCCCCCCCHHEEEEECCC NYHVFAIEPRYSQLFRTGSISNEISVGYRYLREGSEEKATRTAFYAPGSVYAPDLPAPVY CEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCCCCCCCE QWRTGGTTANAFYVDDTINVGNWTITPGLRYEFIRTNLTDHFTGVRRDVSADEPLPSLSM EEECCCCEEEEEEEECCEECCCEEECCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCHHH LYHLSDKWTAFANAGVSFGPLQYFQIASTTNGLKPEKAKTYEIGTHFDGVNGWGGELTLF EEECCCCCEEHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE NIDFDDELQLQGGRGGALDAWTNLGATTHRGVESGLRFDFGSLTNTLAGLTAYATYTFTD EECCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEC ATYQQGAFAGRDLPFYSRHVATLGMRYVRNRWAFNVDGFAQSKQRSPGNPAQSTVYQTQE CCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCHHHHHCCCCCCCHHHHEEECCC SSDGALGDIPGYALMNVRVGYDFGKTAQNLKLVLGIKNVFDRRYYTRSNDNNLGMYVGMP CCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHEECCCCCCEEEEEECC RTVYLQASLAY EEEEEEEEECC >Mature Secondary Structure SHRAHVNASRISIVLPAFRLAFCATSVALLTLPLSSQSQTPPAASAGNEATLKTVTVVG CCCCCCCCCCEEEEHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE NWLEAPNEEKVLEHPGARTIIAREAIAETGANNVRDVLRQVPGVQVRDNNGTGGSDISLN HHHCCCCCCHHHHCCCCCEEHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEE VGVRGLTSRLSPRSTILMDGVPVAVAPYGQPQLSMAPLSLGNLEAVDVVRGAGSVRYGPQ CCCCHHHHCCCCCCEEEECCCCEEEECCCCCCCEECCCCCCCCCHHHHHHCCCCCCCCCC NVGGIISFVTRAIPKTFAADASVSTDIYSYGSSIKANPTAFIGGTNDNGLGGALLYSGVH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCC GSGYRENNDNVDIDDLMLKGAYRISKTDELSAAFHYYDAHAGMPGGLTPQQFADDPFQST CCCCCCCCCCCCHHHHHHHCCEEECCCCHHHHEEEEEECCCCCCCCCCHHHHCCCCCCCC RPYDSFSGRRSDYSFKYAHNDNNRNFEVLMYYTSSFRGSALEQPRRNTTPQRLRLTTSPR CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCHHCCCCCCCCCHHEEEEECCC NYHVFAIEPRYSQLFRTGSISNEISVGYRYLREGSEEKATRTAFYAPGSVYAPDLPAPVY CEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCCCCCCCE QWRTGGTTANAFYVDDTINVGNWTITPGLRYEFIRTNLTDHFTGVRRDVSADEPLPSLSM EEECCCCEEEEEEEECCEECCCEEECCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCHHH LYHLSDKWTAFANAGVSFGPLQYFQIASTTNGLKPEKAKTYEIGTHFDGVNGWGGELTLF EEECCCCCEEHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE NIDFDDELQLQGGRGGALDAWTNLGATTHRGVESGLRFDFGSLTNTLAGLTAYATYTFTD EECCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEC ATYQQGAFAGRDLPFYSRHVATLGMRYVRNRWAFNVDGFAQSKQRSPGNPAQSTVYQTQE CCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCHHHHHCCCCCCCHHHHEEECCC SSDGALGDIPGYALMNVRVGYDFGKTAQNLKLVLGIKNVFDRRYYTRSNDNNLGMYVGMP CCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHEECCCCCCEEEEEECC RTVYLQASLAY EEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]