| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314681
Identifier: 94314681
GI number: 94314681
Start: 2523455
End: 2523991
Strand: Direct
Name: 94314681
Synonym: Rmet_5762
Alternate gene names: NA
Gene position: 2523455-2523991 (Clockwise)
Preceding gene: 94314680
Following gene: 94314682
Centisome position: 97.81
GC content: 64.8
Gene sequence:
>537_bases ATGCCTGCCTGGATGTGCCCCATGCATAAGCTTGTCTGTGTCACCACCCTCCTGCTGACGGCGATGTCGGCGGGGATGCT GACCGGCTGCAGTTCACTGATGAATGAGGGCACGACGGCTGTCGCTGGCATGGGCGGCGCCGCCATTGCCGGCGCGGTCA CGGACAACGCAGCCATTGCCACGGGCATTGGCCTCGGTGTGCAGGCTGGCGCCAAGGCCGCCCTGCAGGCCAGTCAGCGC AAGGTACACGCCGAAACGCAGCATCAGATCGCGCAGGTGGCCGGCAACCTCGATGTCGGCGCGGTGGCGACCTGGGAAGT GGCTCACACCGTGCCGCTCGAGCCCGATGAGAAGGGACGGGTGACCGTGACCCGATTGCTGGGCAATACCTACCTTGCCT GCAAGGAGATCATTTTCTCCGTCGACGATGCGAACAAGGGCAACGGCTTCTATATCGCCGCGGTTTGCCGCGACGGGTCG GTATGGAAGTGGGCTTCCGCCGAGCCCGCTACCGAGCGGTGGGGTTCGCTTCAGTGA
Upstream 100 bases:
>100_bases CTTCCGCGACGATGCCCAGAACGGTCTGATTCATGACCCATGGCAAAGGGCCATGGCTGCGGGCGTTGCGGCAACGTGAT AGTTTCCGCAGGTTGTTTCA
Downstream 100 bases:
>100_bases GGCCGCTCTGCGCGAGGTTGGTCTTGTCGGCGGCGATCGCGAGTCTCTGCGCGTGCAGTTCCGTCGGCGAAATTTCGGGG GCCGTGGCCGGAATTACCAC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPAWMCPMHKLVCVTTLLLTAMSAGMLTGCSSLMNEGTTAVAGMGGAAIAGAVTDNAAIATGIGLGVQAGAKAALQASQR KVHAETQHQIAQVAGNLDVGAVATWEVAHTVPLEPDEKGRVTVTRLLGNTYLACKEIIFSVDDANKGNGFYIAAVCRDGS VWKWASAEPATERWGSLQ
Sequences:
>Translated_178_residues MPAWMCPMHKLVCVTTLLLTAMSAGMLTGCSSLMNEGTTAVAGMGGAAIAGAVTDNAAIATGIGLGVQAGAKAALQASQR KVHAETQHQIAQVAGNLDVGAVATWEVAHTVPLEPDEKGRVTVTRLLGNTYLACKEIIFSVDDANKGNGFYIAAVCRDGS VWKWASAEPATERWGSLQ >Mature_177_residues PAWMCPMHKLVCVTTLLLTAMSAGMLTGCSSLMNEGTTAVAGMGGAAIAGAVTDNAAIATGIGLGVQAGAKAALQASQRK VHAETQHQIAQVAGNLDVGAVATWEVAHTVPLEPDEKGRVTVTRLLGNTYLACKEIIFSVDDANKGNGFYIAAVCRDGSV WKWASAEPATERWGSLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18413; Mature: 18282
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWMCPMHKLVCVTTLLLTAMSAGMLTGCSSLMNEGTTAVAGMGGAAIAGAVTDNAAIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHEEHHCCCCCHHH TGIGLGVQAGAKAALQASQRKVHAETQHQIAQVAGNLDVGAVATWEVAHTVPLEPDEKGR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC VTVTRLLGNTYLACKEIIFSVDDANKGNGFYIAAVCRDGSVWKWASAEPATERWGSLQ EEEEHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCCCHHHHCCCCC >Mature Secondary Structure PAWMCPMHKLVCVTTLLLTAMSAGMLTGCSSLMNEGTTAVAGMGGAAIAGAVTDNAAIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHEEHHCCCCCHHH TGIGLGVQAGAKAALQASQRKVHAETQHQIAQVAGNLDVGAVATWEVAHTVPLEPDEKGR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC VTVTRLLGNTYLACKEIIFSVDDANKGNGFYIAAVCRDGSVWKWASAEPATERWGSLQ EEEEHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA