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The map label for this gene is kpsM [H]

Identifier: 94314651

GI number: 94314651

Start: 2491899

End: 2492807

Strand: Reverse

Name: kpsM [H]

Synonym: Rmet_5732

Alternate gene names: 94314651

Gene position: 2492807-2491899 (Counterclockwise)

Preceding gene: 94314660

Following gene: 94314650

Centisome position: 96.62

GC content: 56.88

Gene sequence:

>909_bases
GTGCAGGTGTCGGTCTGGCAGGTGGGCTGTACGAATTTCACCACGCAAGACCATGGCTGTTCTGCTTTTCTTCTCGGATC
CTCCAAGACGGACGGTCTTCATTTTCTCGCGAGGTCGGTGATGACGCTGACCATCCCCGCACCGCTGCGTGTCACGCTCA
CAGTCTGGCGCGCGCTTTTCTTGCGCGAAGCTGTGACGCGTGTATCGCTTGAGCGGGCGGGCTCGCTCTGGATCTTGCTG
GAATCCGCCGAGCACATCGCCTTTCTGATGATCCTGCACGGCATCTTGCAGCATCGCCTGATCCCCGGCGCGAACCCACC
GCTTTTTATCGGACTCGGCATTCTTCCGTACTACATGTTCCGTCGTATCGCCCTGCGCGGTATCGACGCCGTGACATCGA
ATCGGGCCCTTTTTCACTACAGGCAGGTAAAGGCATTCGACGTGGTGTTGGTGCGGTCCTTGCTCGAAGCCTTTGTGTAT
TTCATCGTCAGCGGCGTACTGATCCTGGCATGTTGGCTCTATGGCATGGACGTGGAGCCGACGAACCCGATGCTGGTCAT
GCTTGGCTTTTTCTTGCTGTGGGCTTTCTCAACCGGAATCTCGCTCATCCTTTCTGCGGCTAGCACGATCGTTCCGGAGA
TCGGACAGATCGCGAAGATCGTCTCAATGTGGTTGTTCTACATCTCCGGCGTGATGTACCCCATCTTCATCGTGCCCGAG
CCATACAGAAGCTGGCTCCTCTACAACCCCATCGTCCATGCGCTTGAGATCATGCGGATTGGATACTTCCCGGCCTATCA
CGCGTACGAGGGGATCAGCATTTCCTACCTAAGCCTGATATCGGCTGCGTTGGTGACTTTTGGCCTGCTGCTACACGTCC
GATTTCGGCGAGCACTGGAGTCGCGATGA

Upstream 100 bases:

>100_bases
GGTTGGCTTTCACGACCTTGGCGGCGTTGAGTGTGCCCGGCAGCGTTCTTCTCGATCAACAACTTCAGGTACCGCTGTCG
TCCTCGGGATTGCCTGCTCC

Downstream 100 bases:

>100_bases
TCGAGCTACGACAGGTCTGGAAGCGCTACAGCGGCCATCACAGTCGCAACTGGGTGCTCCGGGATATCAACCTCTGTATC
CGCCAGGGCGATCGTGTCGG

Product: Polysialic acid transport protein kpsM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MQVSVWQVGCTNFTTQDHGCSAFLLGSSKTDGLHFLARSVMTLTIPAPLRVTLTVWRALFLREAVTRVSLERAGSLWILL
ESAEHIAFLMILHGILQHRLIPGANPPLFIGLGILPYYMFRRIALRGIDAVTSNRALFHYRQVKAFDVVLVRSLLEAFVY
FIVSGVLILACWLYGMDVEPTNPMLVMLGFFLLWAFSTGISLILSAASTIVPEIGQIAKIVSMWLFYISGVMYPIFIVPE
PYRSWLLYNPIVHALEIMRIGYFPAYHAYEGISISYLSLISAALVTFGLLLHVRFRRALESR

Sequences:

>Translated_302_residues
MQVSVWQVGCTNFTTQDHGCSAFLLGSSKTDGLHFLARSVMTLTIPAPLRVTLTVWRALFLREAVTRVSLERAGSLWILL
ESAEHIAFLMILHGILQHRLIPGANPPLFIGLGILPYYMFRRIALRGIDAVTSNRALFHYRQVKAFDVVLVRSLLEAFVY
FIVSGVLILACWLYGMDVEPTNPMLVMLGFFLLWAFSTGISLILSAASTIVPEIGQIAKIVSMWLFYISGVMYPIFIVPE
PYRSWLLYNPIVHALEIMRIGYFPAYHAYEGISISYLSLISAALVTFGLLLHVRFRRALESR
>Mature_302_residues
MQVSVWQVGCTNFTTQDHGCSAFLLGSSKTDGLHFLARSVMTLTIPAPLRVTLTVWRALFLREAVTRVSLERAGSLWILL
ESAEHIAFLMILHGILQHRLIPGANPPLFIGLGILPYYMFRRIALRGIDAVTSNRALFHYRQVKAFDVVLVRSLLEAFVY
FIVSGVLILACWLYGMDVEPTNPMLVMLGFFLLWAFSTGISLILSAASTIVPEIGQIAKIVSMWLFYISGVMYPIFIVPE
PYRSWLLYNPIVHALEIMRIGYFPAYHAYEGISISYLSLISAALVTFGLLLHVRFRRALESR

Specific function: KpsM and kpsT constitute a system for the transport of polysialic acid across the cytoplasmic membrane [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 34047; Mature: 34047

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVSVWQVGCTNFTTQDHGCSAFLLGSSKTDGLHFLARSVMTLTIPAPLRVTLTVWRALF
CCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHH
LREAVTRVSLERAGSLWILLESAEHIAFLMILHGILQHRLIPGANPPLFIGLGILPYYMF
HHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHH
RRIALRGIDAVTSNRALFHYRQVKAFDVVLVRSLLEAFVYFIVSGVLILACWLYGMDVEP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TNPMLVMLGFFLLWAFSTGISLILSAASTIVPEIGQIAKIVSMWLFYISGVMYPIFIVPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
PYRSWLLYNPIVHALEIMRIGYFPAYHAYEGISISYLSLISAALVTFGLLLHVRFRRALE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SR
CC
>Mature Secondary Structure
MQVSVWQVGCTNFTTQDHGCSAFLLGSSKTDGLHFLARSVMTLTIPAPLRVTLTVWRALF
CCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHH
LREAVTRVSLERAGSLWILLESAEHIAFLMILHGILQHRLIPGANPPLFIGLGILPYYMF
HHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHH
RRIALRGIDAVTSNRALFHYRQVKAFDVVLVRSLLEAFVYFIVSGVLILACWLYGMDVEP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TNPMLVMLGFFLLWAFSTGISLILSAASTIVPEIGQIAKIVSMWLFYISGVMYPIFIVPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
PYRSWLLYNPIVHALEIMRIGYFPAYHAYEGISISYLSLISAALVTFGLLLHVRFRRALE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1856162; 7715449 [H]