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The map label for this gene is copB2 [H]

Identifier: 94314589

GI number: 94314589

Start: 2428241

End: 2429323

Strand: Reverse

Name: copB2 [H]

Synonym: Rmet_5670

Alternate gene names: 94314589

Gene position: 2429323-2428241 (Counterclockwise)

Preceding gene: 94314590

Following gene: 94314588

Centisome position: 94.16

GC content: 64.54

Gene sequence:

>1083_bases
ATGATGAACGCACGCAACCCACTCACACTGACGCTGCTCGCGGCGGTGCTTCTTTCCGTCAGCATGGGCACCGCATGGGC
GCAGCATTCGCACGCAGACCATGCGTCGCACGCTGCCCCAACTGCCAACGCGACCAACGCGACCAACGCGACCAACGCGA
CCAACGCGGCCAACGCGGCCAACGCGACCACTTCGGATTCGATGTCATCGATGCAGGGCATGGATGGCGGCGAGATCCAG
GCCATGGACAGCGGCGATAGCAGCGACATCCAGACCATGGACGGCGGCAACGCCGGAAGCGCGCCGCCCGCCATGGATCA
TGGCGACATGAAGATGCAGGGCGGTAGTGCGCCGCCGGATGCACGCGATCCGAATGCGTATTCGGGCGGTTACTTGCTCG
GCGTCGGCAAGTACGCGCTGGGCGAGCATCGCCAGCTTCACATGGCCGACGAACACCTGTTTGCCTCGGTGCTGGTGGAC
CGTCTGGAGTGGACGCATGGCAACGGTAGCAATGCGACCTCGTACGAAGCCCAGGCATGGATTGGTAGCGCCTATAACAA
GCTTGTGATCAAGGCCGAAGGCGAAGCCGAGAAAGGCCGGGTGCACGACGCCCGCACCGAGCTGTTGTGGGGCCATGCGA
TTTCCACGTTTTGGGATACACAGGTCGGCTTTCGCAACGATGCCGGCTATGGCCGGCCCGCGCGGAACTGGCTGGCCTTC
GGCGTGCAGGGGCTGGCGCCATATTGGTTCGAGGTCGATGCCACGGCTTACGTGGGCAACGAGGGGCGCACCGCGCTGCG
CCTGTCCGCCGAGTATGAGTTGCTGATTACGCAGCGGCTGATTCTCCAGCCGCGCATCGAAGCGAACCTGTACGGCAAGA
ATGACCCGGCGACCGGCACCGGCAGCGGGCTGTCGAACGGCGCGGTGGGATTGCGTCTGCGCTACGAGTTCAGTCGCCAG
TTCGCGCCGTACATCGGCGTGGAGCGCTACCAGACGTTCGGCAACACCGCCGATATGGTTCGCACATCCGGCGGCCGTAG
CGGCGAGACGCGTTTCGTTGCCGGTGTGCGCGCCTGGTTCTGA

Upstream 100 bases:

>100_bases
TCAGCTTCCTCGTGACCGCCGATGCGCTCGGGCGCTGGGCATGGCACTGCCACTTGATGATGCATATGGACATGGGCATG
TTCCGTGAAGTGGTGGTGGC

Downstream 100 bases:

>100_bases
TCGCGTCCGGCTTCAATCGTTTTACCCAGGGAGATCTCATGACTTATATCCACACCGCGGCCAAGGCGCTGGTTGCCGCC
ACCGCACTTCTGGCCAGTGC

Product: copper resistance protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MMNARNPLTLTLLAAVLLSVSMGTAWAQHSHADHASHAAPTANATNATNATNATNAANAANATTSDSMSSMQGMDGGEIQ
AMDSGDSSDIQTMDGGNAGSAPPAMDHGDMKMQGGSAPPDARDPNAYSGGYLLGVGKYALGEHRQLHMADEHLFASVLVD
RLEWTHGNGSNATSYEAQAWIGSAYNKLVIKAEGEAEKGRVHDARTELLWGHAISTFWDTQVGFRNDAGYGRPARNWLAF
GVQGLAPYWFEVDATAYVGNEGRTALRLSAEYELLITQRLILQPRIEANLYGKNDPATGTGSGLSNGAVGLRLRYEFSRQ
FAPYIGVERYQTFGNTADMVRTSGGRSGETRFVAGVRAWF

Sequences:

>Translated_360_residues
MMNARNPLTLTLLAAVLLSVSMGTAWAQHSHADHASHAAPTANATNATNATNATNAANAANATTSDSMSSMQGMDGGEIQ
AMDSGDSSDIQTMDGGNAGSAPPAMDHGDMKMQGGSAPPDARDPNAYSGGYLLGVGKYALGEHRQLHMADEHLFASVLVD
RLEWTHGNGSNATSYEAQAWIGSAYNKLVIKAEGEAEKGRVHDARTELLWGHAISTFWDTQVGFRNDAGYGRPARNWLAF
GVQGLAPYWFEVDATAYVGNEGRTALRLSAEYELLITQRLILQPRIEANLYGKNDPATGTGSGLSNGAVGLRLRYEFSRQ
FAPYIGVERYQTFGNTADMVRTSGGRSGETRFVAGVRAWF
>Mature_360_residues
MMNARNPLTLTLLAAVLLSVSMGTAWAQHSHADHASHAAPTANATNATNATNATNAANAANATTSDSMSSMQGMDGGEIQ
AMDSGDSSDIQTMDGGNAGSAPPAMDHGDMKMQGGSAPPDARDPNAYSGGYLLGVGKYALGEHRQLHMADEHLFASVLVD
RLEWTHGNGSNATSYEAQAWIGSAYNKLVIKAEGEAEKGRVHDARTELLWGHAISTFWDTQVGFRNDAGYGRPARNWLAF
GVQGLAPYWFEVDATAYVGNEGRTALRLSAEYELLITQRLILQPRIEANLYGKNDPATGTGSGLSNGAVGLRLRYEFSRQ
FAPYIGVERYQTFGNTADMVRTSGGRSGETRFVAGVRAWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 38486; Mature: 38486

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNARNPLTLTLLAAVLLSVSMGTAWAQHSHADHASHAAPTANATNATNATNATNAANAA
CCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
NATTSDSMSSMQGMDGGEIQAMDSGDSSDIQTMDGGNAGSAPPAMDHGDMKMQGGSAPPD
CCCCCHHHHHHCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCC
ARDPNAYSGGYLLGVGKYALGEHRQLHMADEHLFASVLVDRLEWTHGNGSNATSYEAQAW
CCCCCCCCCCEEEEECCHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
IGSAYNKLVIKAEGEAEKGRVHDARTELLWGHAISTFWDTQVGFRNDAGYGRPARNWLAF
HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GVQGLAPYWFEVDATAYVGNEGRTALRLSAEYELLITQRLILQPRIEANLYGKNDPATGT
HHHHCCCEEEEEEEEEEECCCCCEEEEECCCEEEEEHHHHHHCCCCCEEEECCCCCCCCC
GSGLSNGAVGLRLRYEFSRQFAPYIGVERYQTFGNTADMVRTSGGRSGETRFVAGVRAWF
CCCCCCCCEEEEEEEECCCCCCCHHCHHHHHHCCCHHHHHCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MMNARNPLTLTLLAAVLLSVSMGTAWAQHSHADHASHAAPTANATNATNATNATNAANAA
CCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
NATTSDSMSSMQGMDGGEIQAMDSGDSSDIQTMDGGNAGSAPPAMDHGDMKMQGGSAPPD
CCCCCHHHHHHCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCC
ARDPNAYSGGYLLGVGKYALGEHRQLHMADEHLFASVLVDRLEWTHGNGSNATSYEAQAW
CCCCCCCCCCEEEEECCHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
IGSAYNKLVIKAEGEAEKGRVHDARTELLWGHAISTFWDTQVGFRNDAGYGRPARNWLAF
HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GVQGLAPYWFEVDATAYVGNEGRTALRLSAEYELLITQRLILQPRIEANLYGKNDPATGT
HHHHCCCEEEEEEEEEEECCCCCEEEEECCCEEEEEHHHHHHCCCCCEEEECCCCCCCCC
GSGLSNGAVGLRLRYEFSRQFAPYIGVERYQTFGNTADMVRTSGGRSGETRFVAGVRAWF
CCCCCCCCEEEEEEEECCCCCCCHHCHHHHHHCCCHHHHHCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]