| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is uspA15
Identifier: 94314566
GI number: 94314566
Start: 2408572
End: 2409093
Strand: Reverse
Name: uspA15
Synonym: Rmet_5647
Alternate gene names: NA
Gene position: 2409093-2408572 (Counterclockwise)
Preceding gene: 94314568
Following gene: 94314563
Centisome position: 93.37
GC content: 63.98
Gene sequence:
>522_bases ATGATCAAGATACTAGTGCCGGTGAATGGCTCGGAATGCGCGCTCGACGCGGTGCGCTATGCGGCGTTCCTGTATCGAGA GAGTGGCGTGGCCGAGGTGGTGCTGCTGAACGTGCAGCCGCCGCTGGAGCATTCGCGGGCCAGCGCCTTTCACTCGCTTG CGGCATTGCGCGAGCAGGAATCCCAGGATGGTGAGTGCGCGCTGGAGCAGGCGAGCAATATCCTCGACGATTCCGGCGTG CGCTATACCGCGATGATTGGCGTCGGCAGCCCGGCGCAAGCGGTGGCTAGCGCGGCGACGGCTTTGAACTGCGATGGCAT CGTGATCGGCGTGAACCTGTGGTCGAGAATCAAGGCATGCTTCGGCGCCGGACTTACCTCGGGCATCATGCGCAAGACTT CCGTGCCCGTGACGGTGGTGAAGTCGGCTGGAGCAAGCGGCGCGCTCACCAGCCAACCCTTACCGCCCGTTCTGCCGGCT TCGCATCGTCACGCCAGGCCGATGCTGGTCGTGTATCCGTGA
Upstream 100 bases:
>100_bases ATTTTGACAGGATTTTTACTGCGGGCAGCCATCCTTTGATCCGCTATCTATAAGCACATGCTTACCCTTGAGTCAGGGAT ACGGATGGACCGAGGAGATC
Downstream 100 bases:
>100_bases CGCATGGCCTGCATGTCATCGGTTGAGCGGTAACGGTAGCGGGTGTCATGGATCGGACGAGACGGTTGCCAGTGCGGCGC CCTTCGCGCGCGCCATGAAG
Product: Universal stress protein UspA family
Products: NA
Alternate protein names: UspA Domain Protein; UspA Domain-Containing Protein; UspA Family Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family; Universal Stress Protein UspA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MIKILVPVNGSECALDAVRYAAFLYRESGVAEVVLLNVQPPLEHSRASAFHSLAALREQESQDGECALEQASNILDDSGV RYTAMIGVGSPAQAVASAATALNCDGIVIGVNLWSRIKACFGAGLTSGIMRKTSVPVTVVKSAGASGALTSQPLPPVLPA SHRHARPMLVVYP
Sequences:
>Translated_173_residues MIKILVPVNGSECALDAVRYAAFLYRESGVAEVVLLNVQPPLEHSRASAFHSLAALREQESQDGECALEQASNILDDSGV RYTAMIGVGSPAQAVASAATALNCDGIVIGVNLWSRIKACFGAGLTSGIMRKTSVPVTVVKSAGASGALTSQPLPPVLPA SHRHARPMLVVYP >Mature_173_residues MIKILVPVNGSECALDAVRYAAFLYRESGVAEVVLLNVQPPLEHSRASAFHSLAALREQESQDGECALEQASNILDDSGV RYTAMIGVGSPAQAVASAATALNCDGIVIGVNLWSRIKACFGAGLTSGIMRKTSVPVTVVKSAGASGALTSQPLPPVLPA SHRHARPMLVVYP
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18037; Mature: 18037
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKILVPVNGSECALDAVRYAAFLYRESGVAEVVLLNVQPPLEHSRASAFHSLAALREQE CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC SQDGECALEQASNILDDSGVRYTAMIGVGSPAQAVASAATALNCDGIVIGVNLWSRIKAC CCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHH FGAGLTSGIMRKTSVPVTVVKSAGASGALTSQPLPPVLPASHRHARPMLVVYP HCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MIKILVPVNGSECALDAVRYAAFLYRESGVAEVVLLNVQPPLEHSRASAFHSLAALREQE CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC SQDGECALEQASNILDDSGVRYTAMIGVGSPAQAVASAATALNCDGIVIGVNLWSRIKAC CCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHH FGAGLTSGIMRKTSVPVTVVKSAGASGALTSQPLPPVLPASHRHARPMLVVYP HCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA