Click here to switch to the map view.

The map label for this gene is 94314516

Identifier: 94314516

GI number: 94314516

Start: 2351284

End: 2351997

Strand: Reverse

Name: 94314516

Synonym: Rmet_5597

Alternate gene names: NA

Gene position: 2351997-2351284 (Counterclockwise)

Preceding gene: 94314517

Following gene: 94314511

Centisome position: 91.16

GC content: 66.53

Gene sequence:

>714_bases
ATGCCAGAAACCGTAACGCCCGCCCCCAGCCAGCAAGTCGCCGTTCCCATGTCCTCGCCCCTCCCCGTACCTGCTACCAC
TCGCCAGTTCATCGCCGGACCCGCCGGTCAGATCGAAGTTCTCGTCGATACGCCGGCCGCTGCGACGATCGGCGTTGCCG
TGGTGGCGCATCCGCATCCGTCCCAAGGCGGTAACGCCGAACACAAGATTCCCCAACTGCTTGCGCGCATCCTGCAGGCG
CATGGTTTCCTGGCGTTGCGGCCGAACTATCGCGGCGTTGGCCAGAGCGAAGGGGAGTACGACGAAGGGAACGGCGAAAC
GGACGATGTGCTGGCCGTGATCCGGTATGCGCAATCAGCGAATGCGGGGCTGCCGCTGGCATTGGCTGGATTCTCGTTCG
GCGCCTTCGTCCAGACGCGCGCAGCCGAGGTGCTCACCGCCGAAGGCGAGTCGATCGCGCACTTGATGCTGACGGGAATG
CCCGCTGGCGCGTTGTCCGACACGCTGTCCTATGACACGCCGACGGTCCCCGCCCACGCACTGGTCGTGCACGGAGAGCG
CGATGAGCGGGTACCGCTGGTAAATGTCTTCGACTGGGCGCGACCGCAGGAACTGCCGGTGGTCGTGGTGCCGGGCGCCG
GACACTTCTTCACGGGGAAGCTGCCAGGCCTGCGCCGCGTGGTGGAGAGCTATCTGCGGCGGCCGGCCGAGTGA

Upstream 100 bases:

>100_bases
CAAGGCTGATAGCCAGCATTGAGAATCGGCAGGCAGGTGTGGGACGGCGGCAGGCGTTGCCGCCGGGGGGCTGCTGCGGG
TATGCTGCGCGTGCATTCGT

Downstream 100 bases:

>100_bases
CCGCCTGATCGGCAGCTATTGGGTCAGAACTCGTACATGATCGAAATATCGCCGGTCATGTTGGCCGAGTGAGATACGAC
CGGGCTGTTGCGCGCATCGC

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPETVTPAPSQQVAVPMSSPLPVPATTRQFIAGPAGQIEVLVDTPAAATIGVAVVAHPHPSQGGNAEHKIPQLLARILQA
HGFLALRPNYRGVGQSEGEYDEGNGETDDVLAVIRYAQSANAGLPLALAGFSFGAFVQTRAAEVLTAEGESIAHLMLTGM
PAGALSDTLSYDTPTVPAHALVVHGERDERVPLVNVFDWARPQELPVVVVPGAGHFFTGKLPGLRRVVESYLRRPAE

Sequences:

>Translated_237_residues
MPETVTPAPSQQVAVPMSSPLPVPATTRQFIAGPAGQIEVLVDTPAAATIGVAVVAHPHPSQGGNAEHKIPQLLARILQA
HGFLALRPNYRGVGQSEGEYDEGNGETDDVLAVIRYAQSANAGLPLALAGFSFGAFVQTRAAEVLTAEGESIAHLMLTGM
PAGALSDTLSYDTPTVPAHALVVHGERDERVPLVNVFDWARPQELPVVVVPGAGHFFTGKLPGLRRVVESYLRRPAE
>Mature_236_residues
PETVTPAPSQQVAVPMSSPLPVPATTRQFIAGPAGQIEVLVDTPAAATIGVAVVAHPHPSQGGNAEHKIPQLLARILQAH
GFLALRPNYRGVGQSEGEYDEGNGETDDVLAVIRYAQSANAGLPLALAGFSFGAFVQTRAAEVLTAEGESIAHLMLTGMP
AGALSDTLSYDTPTVPAHALVVHGERDERVPLVNVFDWARPQELPVVVVPGAGHFFTGKLPGLRRVVESYLRRPAE

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 24940; Mature: 24808

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETVTPAPSQQVAVPMSSPLPVPATTRQFIAGPAGQIEVLVDTPAAATIGVAVVAHPHP
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCC
SQGGNAEHKIPQLLARILQAHGFLALRPNYRGVGQSEGEYDEGNGETDDVLAVIRYAQSA
CCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
NAGLPLALAGFSFGAFVQTRAAEVLTAEGESIAHLMLTGMPAGALSDTLSYDTPTVPAHA
CCCCCEEEECCCHHHHHHHHHHHHEECCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCEE
LVVHGERDERVPLVNVFDWARPQELPVVVVPGAGHFFTGKLPGLRRVVESYLRRPAE
EEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PETVTPAPSQQVAVPMSSPLPVPATTRQFIAGPAGQIEVLVDTPAAATIGVAVVAHPHP
CCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCC
SQGGNAEHKIPQLLARILQAHGFLALRPNYRGVGQSEGEYDEGNGETDDVLAVIRYAQSA
CCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
NAGLPLALAGFSFGAFVQTRAAEVLTAEGESIAHLMLTGMPAGALSDTLSYDTPTVPAHA
CCCCCEEEECCCHHHHHHHHHHHHEECCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCEE
LVVHGERDERVPLVNVFDWARPQELPVVVVPGAGHFFTGKLPGLRRVVESYLRRPAE
EEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]