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The map label for this gene is ycxA [H]

Identifier: 94314504

GI number: 94314504

Start: 2337770

End: 2339212

Strand: Reverse

Name: ycxA [H]

Synonym: Rmet_5585

Alternate gene names: 94314504

Gene position: 2339212-2337770 (Counterclockwise)

Preceding gene: 94314507

Following gene: 94314503

Centisome position: 90.66

GC content: 66.39

Gene sequence:

>1443_bases
ATGACGGGGGCGTATGGCTGTGGCAGGGGCGAATGGCACCATTACAGCATGGCTCGCCGTCTCTTGCCATGCGTTCAGCG
CATGACAAAACGCCCGAAATGTCGGTTGAACCGCCGCACCGGTGCGCATGAAATGGAGGACATTCAACGCCTTCATCCGA
CCGACAGCATGACCGACGCTCCCCGCTCCCATACTCGTGCCGCATCGCAGCCCGCGGCCCCGGCGCCATGGTGGCGCGAT
ACCGTCTTCCTGTTGCTGGCCGGCGGGCTGGTCATGGGGCTGGCGCTGGGCGCGCGGCACGTGCAAGGGCTGTTCCTGCT
GCCGATCATCGGCGACCGAGGCTGGACGCGTGAGTCGATTGGCTTGGCCATGGCCGTGCAAAACCTGACCTGGGGCATCG
CGCAACCATTCACTGGCATGGTGGCCGACCGGTTCGGCTCCTGGAAGGTGATGCTGGCCGGTCTGGTGCTGTACGCGCTG
GGCCTCTACGGGATGGCGGTGATCACGAGCGCGCCGGCATTCATGCTGGTCGCCGGGGTTTGCATCGGCGTGGCGCAGTC
TGGGACGACGTTCGGCGTGGTCTATGGCGCGCTGAGCCGCATGGTGCCGCCAGAGGACCGCAGCCGCACGCTGGGCATCG
CCGGGGCGATCGGTGGCATCGGCCAGTTCCTGATGGTGCCGTCCGCGCAGGCGCTGTTGTCGTTCACCGGCTGGACGAAC
GCGCTGATGGTGCTGGCGGTATGCGCGGCGGTGTTGATCCCGTTCGCGTTGCCGTTCCGCGATCGCGCGCCGGCATCCGA
TGCTGCTACCGGCGGCCAGCCACCGATGCCGATGCTGGCCGCCATCCGCGAGGCTTTCAGCCACTCGGGCTTCTGGCTGC
TCAACCTCGGCTTCCTGGCATGTGGCTTCCAATTGGCCTTTATCGCCAACCATCTGCCCGCCTACCTGCGTGACAAGGGG
ATGCAGCCCGCTGACGGCATGGCCGCGCTGGCCATCATCGCGCTGGCCAATATCTTCGGCACCTATGTGTTCGGCTGGCT
GGGCGGGCGACATACGCGGAAGTACCTGCTGGCCGGCATCTATCTGGCGCGTACGTCGGCAATGGCCCTGTTCGTGCTGC
TGCCCCTGAGCTCGATGAGCCTGTATGCGTTCGCAGCGGTGATGGGCTTCCTGTGGCTCGGTACGGTGCCGCTGACCAGC
GGCATCGTCTCCCAGGTGTTCGGCGTGCGCTACATCACCACGCTGTTCGGCTTCGTCTTCTTCGGCCACCAGCTTGGCTC
GTTTCTGGGCGTGTGGCTGGGTGGGGTGGTGTTCGAGCTGACGCGGTCCTATGACCTGGTCTGGATGGGGGCGATGGCAC
TGGGCGTGATCGCCGCCGCGCTGCACTGGCCGATTGACGATCGGACGATCGCGCGCGTGCCGATGCGCCCGGCACGGGCA
TGA

Upstream 100 bases:

>100_bases
GCAGAGGTCCTCGGCGGCTTGCGTGATGCTCATGCGCCGGCCCACGGCGACGAAGCCCTTGAGCAGGTCGAGGGAGAACA
ACCGGGCGAGCGGTTCTGAC

Downstream 100 bases:

>100_bases
CGGGCAATACGGGCTATGCTCTTGCGGAATAAACCCTGGTGCTTCGGTGTTTACGTAGCAGGCGAGATACGCGCTCAAGC
AGTCCAAGTGGAGTATGCTG

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTGAYGCGRGEWHHYSMARRLLPCVQRMTKRPKCRLNRRTGAHEMEDIQRLHPTDSMTDAPRSHTRAASQPAAPAPWWRD
TVFLLLAGGLVMGLALGARHVQGLFLLPIIGDRGWTRESIGLAMAVQNLTWGIAQPFTGMVADRFGSWKVMLAGLVLYAL
GLYGMAVITSAPAFMLVAGVCIGVAQSGTTFGVVYGALSRMVPPEDRSRTLGIAGAIGGIGQFLMVPSAQALLSFTGWTN
ALMVLAVCAAVLIPFALPFRDRAPASDAATGGQPPMPMLAAIREAFSHSGFWLLNLGFLACGFQLAFIANHLPAYLRDKG
MQPADGMAALAIIALANIFGTYVFGWLGGRHTRKYLLAGIYLARTSAMALFVLLPLSSMSLYAFAAVMGFLWLGTVPLTS
GIVSQVFGVRYITTLFGFVFFGHQLGSFLGVWLGGVVFELTRSYDLVWMGAMALGVIAAALHWPIDDRTIARVPMRPARA

Sequences:

>Translated_480_residues
MTGAYGCGRGEWHHYSMARRLLPCVQRMTKRPKCRLNRRTGAHEMEDIQRLHPTDSMTDAPRSHTRAASQPAAPAPWWRD
TVFLLLAGGLVMGLALGARHVQGLFLLPIIGDRGWTRESIGLAMAVQNLTWGIAQPFTGMVADRFGSWKVMLAGLVLYAL
GLYGMAVITSAPAFMLVAGVCIGVAQSGTTFGVVYGALSRMVPPEDRSRTLGIAGAIGGIGQFLMVPSAQALLSFTGWTN
ALMVLAVCAAVLIPFALPFRDRAPASDAATGGQPPMPMLAAIREAFSHSGFWLLNLGFLACGFQLAFIANHLPAYLRDKG
MQPADGMAALAIIALANIFGTYVFGWLGGRHTRKYLLAGIYLARTSAMALFVLLPLSSMSLYAFAAVMGFLWLGTVPLTS
GIVSQVFGVRYITTLFGFVFFGHQLGSFLGVWLGGVVFELTRSYDLVWMGAMALGVIAAALHWPIDDRTIARVPMRPARA
>Mature_479_residues
TGAYGCGRGEWHHYSMARRLLPCVQRMTKRPKCRLNRRTGAHEMEDIQRLHPTDSMTDAPRSHTRAASQPAAPAPWWRDT
VFLLLAGGLVMGLALGARHVQGLFLLPIIGDRGWTRESIGLAMAVQNLTWGIAQPFTGMVADRFGSWKVMLAGLVLYALG
LYGMAVITSAPAFMLVAGVCIGVAQSGTTFGVVYGALSRMVPPEDRSRTLGIAGAIGGIGQFLMVPSAQALLSFTGWTNA
LMVLAVCAAVLIPFALPFRDRAPASDAATGGQPPMPMLAAIREAFSHSGFWLLNLGFLACGFQLAFIANHLPAYLRDKGM
QPADGMAALAIIALANIFGTYVFGWLGGRHTRKYLLAGIYLARTSAMALFVLLPLSSMSLYAFAAVMGFLWLGTVPLTSG
IVSQVFGVRYITTLFGFVFFGHQLGSFLGVWLGGVVFELTRSYDLVWMGAMALGVIAAALHWPIDDRTIARVPMRPARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789969, Length=362, Percent_Identity=23.2044198895028, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51688; Mature: 51557

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAYGCGRGEWHHYSMARRLLPCVQRMTKRPKCRLNRRTGAHEMEDIQRLHPTDSMTDA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PRSHTRAASQPAAPAPWWRDTVFLLLAGGLVMGLALGARHVQGLFLLPIIGDRGWTRESI
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHH
GLAMAVQNLTWGIAQPFTGMVADRFGSWKVMLAGLVLYALGLYGMAVITSAPAFMLVAGV
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CIGVAQSGTTFGVVYGALSRMVPPEDRSRTLGIAGAIGGIGQFLMVPSAQALLSFTGWTN
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ALMVLAVCAAVLIPFALPFRDRAPASDAATGGQPPMPMLAAIREAFSHSGFWLLNLGFLA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
CGFQLAFIANHLPAYLRDKGMQPADGMAALAIIALANIFGTYVFGWLGGRHTRKYLLAGI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLARTSAMALFVLLPLSSMSLYAFAAVMGFLWLGTVPLTSGIVSQVFGVRYITTLFGFVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGHQLGSFLGVWLGGVVFELTRSYDLVWMGAMALGVIAAALHWPIDDRTIARVPMRPARA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
TGAYGCGRGEWHHYSMARRLLPCVQRMTKRPKCRLNRRTGAHEMEDIQRLHPTDSMTDA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PRSHTRAASQPAAPAPWWRDTVFLLLAGGLVMGLALGARHVQGLFLLPIIGDRGWTRESI
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHH
GLAMAVQNLTWGIAQPFTGMVADRFGSWKVMLAGLVLYALGLYGMAVITSAPAFMLVAGV
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CIGVAQSGTTFGVVYGALSRMVPPEDRSRTLGIAGAIGGIGQFLMVPSAQALLSFTGWTN
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ALMVLAVCAAVLIPFALPFRDRAPASDAATGGQPPMPMLAAIREAFSHSGFWLLNLGFLA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
CGFQLAFIANHLPAYLRDKGMQPADGMAALAIIALANIFGTYVFGWLGGRHTRKYLLAGI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLARTSAMALFVLLPLSSMSLYAFAAVMGFLWLGTVPLTSGIVSQVFGVRYITTLFGFVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGHQLGSFLGVWLGGVVFELTRSYDLVWMGAMALGVIAAALHWPIDDRTIARVPMRPARA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8355609; 8969502; 9384377 [H]