| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314487
Identifier: 94314487
GI number: 94314487
Start: 2321643
End: 2322293
Strand: Reverse
Name: 94314487
Synonym: Rmet_5568
Alternate gene names: NA
Gene position: 2322293-2321643 (Counterclockwise)
Preceding gene: 94314490
Following gene: 94314486
Centisome position: 90.01
GC content: 58.06
Gene sequence:
>651_bases GTGCACGTGTCTCTTAACCTCAAACGCGTTAATAACTTCGGCGACGGTGTTCTTGCCCTCGGCCAAGTAGATTTCCTCCT TCGGTTCTTGAGCGACCCGAACCCCATCGCGGCAGGACTGCCGCCGTACGCTATGGCGCTGACTTGCCCGCTGGCAGTTC CGAGCATCCAGGACCTCCCACCCGACTGCTCGGCGCCGGCAACCATACAGATAGAGCGCGACATCCTCGATGGGCACCAC ATTCTTACAGTGAAGCTCTCGCTTGGCGAACTGAACATCGTATGGCTCACCGAACCTGATGATCCAGATATCTGGATGTT CATTGACGGCTGGAGGCAATTCGGCGTGGTTCCCATCGTGCTCGGCGTCGAAGAGGCGAAGGAAGAGCGATATCGCATCA TCATGGCGATACCGGAGTGCATACCGTCGTTTGGGGACGGCCGAGGTAATCAGGAGCCCAGCGATATCCATGAGCGTTGG GCAAGCATCCTCGCATTCTGCGAAACCCATGGGGCAGCGTTTCCCCTCGTGAGTGAGCACGTGCCGCCTCTGCCGCGGCC GGACAATTTCAAAGCACTGAAGTATGTGAAGTCCTGTGCCGACATAGCGCTCCGCATCGCTACGCCATCACCGCTCTGCA TCCGTACATAG
Upstream 100 bases:
>100_bases ATCGCTGTCAATCATCATCGACACGCGCACCTACACTCATTTACAGGCACCTGTCCTGGGCGAGCGGCAAGTCGGCCGGC CTCGCAACTCACAGTGAATA
Downstream 100 bases:
>100_bases CTACGCCGCGTAGGCCGCAGCAAATTGCCTCCGCCTGCCTGTTCGGTGGCGCGGGGGCATGTTGAGAGCCCAGCAATTCT CGTCAGCATCAGAAGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MHVSLNLKRVNNFGDGVLALGQVDFLLRFLSDPNPIAAGLPPYAMALTCPLAVPSIQDLPPDCSAPATIQIERDILDGHH ILTVKLSLGELNIVWLTEPDDPDIWMFIDGWRQFGVVPIVLGVEEAKEERYRIIMAIPECIPSFGDGRGNQEPSDIHERW ASILAFCETHGAAFPLVSEHVPPLPRPDNFKALKYVKSCADIALRIATPSPLCIRT
Sequences:
>Translated_216_residues MHVSLNLKRVNNFGDGVLALGQVDFLLRFLSDPNPIAAGLPPYAMALTCPLAVPSIQDLPPDCSAPATIQIERDILDGHH ILTVKLSLGELNIVWLTEPDDPDIWMFIDGWRQFGVVPIVLGVEEAKEERYRIIMAIPECIPSFGDGRGNQEPSDIHERW ASILAFCETHGAAFPLVSEHVPPLPRPDNFKALKYVKSCADIALRIATPSPLCIRT >Mature_216_residues MHVSLNLKRVNNFGDGVLALGQVDFLLRFLSDPNPIAAGLPPYAMALTCPLAVPSIQDLPPDCSAPATIQIERDILDGHH ILTVKLSLGELNIVWLTEPDDPDIWMFIDGWRQFGVVPIVLGVEEAKEERYRIIMAIPECIPSFGDGRGNQEPSDIHERW ASILAFCETHGAAFPLVSEHVPPLPRPDNFKALKYVKSCADIALRIATPSPLCIRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23823; Mature: 23823
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVSLNLKRVNNFGDGVLALGQVDFLLRFLSDPNPIAAGLPPYAMALTCPLAVPSIQDLP CEEEEEEHCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCCCC PDCSAPATIQIERDILDGHHILTVKLSLGELNIVWLTEPDDPDIWMFIDGWRQFGVVPIV CCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCEEEE LGVEEAKEERYRIIMAIPECIPSFGDGRGNQEPSDIHERWASILAFCETHGAAFPLVSEH EECHHHHHCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHC VPPLPRPDNFKALKYVKSCADIALRIATPSPLCIRT CCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEC >Mature Secondary Structure MHVSLNLKRVNNFGDGVLALGQVDFLLRFLSDPNPIAAGLPPYAMALTCPLAVPSIQDLP CEEEEEEHCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCCCC PDCSAPATIQIERDILDGHHILTVKLSLGELNIVWLTEPDDPDIWMFIDGWRQFGVVPIV CCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCEEEE LGVEEAKEERYRIIMAIPECIPSFGDGRGNQEPSDIHERWASILAFCETHGAAFPLVSEH EECHHHHHCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHC VPPLPRPDNFKALKYVKSCADIALRIATPSPLCIRT CCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA