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The map label for this gene is 94314299

Identifier: 94314299

GI number: 94314299

Start: 2106144

End: 2106929

Strand: Reverse

Name: 94314299

Synonym: Rmet_5380

Alternate gene names: NA

Gene position: 2106929-2106144 (Counterclockwise)

Preceding gene: 94314300

Following gene: 94314298

Centisome position: 81.66

GC content: 66.67

Gene sequence:

>786_bases
ATGAGCCAACAAGACAAGCCGGTGACCCGGCTGTGCACCCACACGCTGACCAGCCTGCACTATCGCGAGGCCGATCTCGT
GGACGACCTTCTGGGCAAGAAGACCTTCACCGAAGTCATGCTGATGCAGATCCTCGGCCGCACCCCGCGCCCGGTGGACA
TGCGTATCGCCGACATGGTGCTCGTGGTGCTGATGGAGCACGGCCTGACGCCAAGCGCCATCGCCACGCGCCTGATCTAC
ATGAGCGCGCCAGAGAACCTGCAAGGCGCCGTGTCGGCTGGCCTGCTGGCGGTTGGCAGTTCGTTCGTCGGCACGATGGA
GAACTGCTCGACGTTGCTGGACCGCATTCTGGCGGCACAGGACCCCGATGCCGAAGCACTGTCCATCGCGCGCCACTACA
AGGAAATGCGGGCGGCCGTGCCGGGTTTTGGCCATCACCTGCACAAGCCGGTGGACCCGCGCGCGTACAAGCTGCTGGAA
CTCGGCGATGCGGAGCCGGATCTGGCCGGCGCGCATATCGGTGCCCTGAGACGCCTGTCGGCGGCGGTTGACGAAGTGGC
GGGGCGGCCGATCACGATCAATGCCACGGGGTCGGTGGCCGCGCTGCTTGGCGAGATTGGCGTGCCGACGGCGGTGATGC
GGGGGTTCGCGGTGATCTCCCGCGCGGCTGGGCTCGTGGCCCATATCGTCGAGGAGCAGCAGAGCCCGTCGGGACGCTAT
ATCTGGGACGTGGTCGAGGAGGCCATCCCGTACGTCGGCAACGCGCCGCACGGAGACCACGCATGA

Upstream 100 bases:

>100_bases
TTCATTTCCACACCAGCCTGCCGCGCTCCACCGTCGGCAAGGTACTCAAGAACACCGTGCGCGACCAGGCGCTGACGGCA
TTGCAAACCGGAGACCAAGC

Downstream 100 bases:

>100_bases
ACGCGCTGCCGCTCAGTCTGGCGGATCGCACCGTGTTTGTGGCGGGCGGTGGATCGGCGGGCCCCGGCTGGAGCATCGGG
CGCGCCGCCAGCGTGACCTA

Product: citrate synthase

Products: citrate; CoA

Alternate protein names: Citryl-CoA Lyase; 2-Methylcitrate Synthase/Citrate Synthase II PrpC/CitZ; Citrate Synthase I

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSQQDKPVTRLCTHTLTSLHYREADLVDDLLGKKTFTEVMLMQILGRTPRPVDMRIADMVLVVLMEHGLTPSAIATRLIY
MSAPENLQGAVSAGLLAVGSSFVGTMENCSTLLDRILAAQDPDAEALSIARHYKEMRAAVPGFGHHLHKPVDPRAYKLLE
LGDAEPDLAGAHIGALRRLSAAVDEVAGRPITINATGSVAALLGEIGVPTAVMRGFAVISRAAGLVAHIVEEQQSPSGRY
IWDVVEEAIPYVGNAPHGDHA

Sequences:

>Translated_261_residues
MSQQDKPVTRLCTHTLTSLHYREADLVDDLLGKKTFTEVMLMQILGRTPRPVDMRIADMVLVVLMEHGLTPSAIATRLIY
MSAPENLQGAVSAGLLAVGSSFVGTMENCSTLLDRILAAQDPDAEALSIARHYKEMRAAVPGFGHHLHKPVDPRAYKLLE
LGDAEPDLAGAHIGALRRLSAAVDEVAGRPITINATGSVAALLGEIGVPTAVMRGFAVISRAAGLVAHIVEEQQSPSGRY
IWDVVEEAIPYVGNAPHGDHA
>Mature_260_residues
SQQDKPVTRLCTHTLTSLHYREADLVDDLLGKKTFTEVMLMQILGRTPRPVDMRIADMVLVVLMEHGLTPSAIATRLIYM
SAPENLQGAVSAGLLAVGSSFVGTMENCSTLLDRILAAQDPDAEALSIARHYKEMRAAVPGFGHHLHKPVDPRAYKLLEL
GDAEPDLAGAHIGALRRLSAAVDEVAGRPITINATGSVAALLGEIGVPTAVMRGFAVISRAAGLVAHIVEEQQSPSGRYI
WDVVEEAIPYVGNAPHGDHA

Specific function: Unknown

COG id: COG0372

COG function: function code C; Citrate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.3.1

Molecular weight: Translated: 27936; Mature: 27804

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQDKPVTRLCTHTLTSLHYREADLVDDLLGKKTFTEVMLMQILGRTPRPVDMRIADMV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LVVLMEHGLTPSAIATRLIYMSAPENLQGAVSAGLLAVGSSFVGTMENCSTLLDRILAAQ
HHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPDAEALSIARHYKEMRAAVPGFGHHLHKPVDPRAYKLLELGDAEPDLAGAHIGALRRLS
CCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AAVDEVAGRPITINATGSVAALLGEIGVPTAVMRGFAVISRAAGLVAHIVEEQQSPSGRY
HHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IWDVVEEAIPYVGNAPHGDHA
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SQQDKPVTRLCTHTLTSLHYREADLVDDLLGKKTFTEVMLMQILGRTPRPVDMRIADMV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LVVLMEHGLTPSAIATRLIYMSAPENLQGAVSAGLLAVGSSFVGTMENCSTLLDRILAAQ
HHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPDAEALSIARHYKEMRAAVPGFGHHLHKPVDPRAYKLLELGDAEPDLAGAHIGALRRLS
CCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AAVDEVAGRPITINATGSVAALLGEIGVPTAVMRGFAVISRAAGLVAHIVEEQQSPSGRY
HHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IWDVVEEAIPYVGNAPHGDHA
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acetyl-CoA; H2O; oxaloacetate

Specific reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA