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The map label for this gene is ydiO [C]

Identifier: 94314277

GI number: 94314277

Start: 2079321

End: 2080361

Strand: Direct

Name: ydiO [C]

Synonym: Rmet_5358

Alternate gene names: 94314277

Gene position: 2079321-2080361 (Clockwise)

Preceding gene: 94314276

Following gene: 94314278

Centisome position: 80.59

GC content: 67.92

Gene sequence:

>1041_bases
ATGAACGAACTCGAACAAATGCTGACCGACAGCGCGGAGCGCCTGTTCGGCAACGAGGTCACGCTCGAACAGTCCGAAGC
GATGGAGCGCGGCGAGTTTCCGCAATCACTCTGGAATGCGGTGGACAAGAGCGGTCTGGTGCACGTGCTTGCCAGCGAGG
AAGCCGGTGGCGCCAACGCGAGCTGGACGGAAGCCCTGCCGGTGATGCTGGCCGCTGGCCGCACGGTCACCCCGCTGCCG
TTCGTCGATGCCGCCACCGCCACGTGGCTGCTGAGCCGTCTTGGCATCGAAGCGCCGCAGGGCCTGCTGGCCCTTGCCGA
TCTGTCAGCGGCCCCGACCGCGAGCCAGGATGGCGACACCTGGCGGCTGAGCGCGGAAGTGGAAGTCCCCTGGGGCCGAC
ACGCGCAACACGTGCTGGTGCGCGCCGCCAACGCCTGGCTGTTGCTGCCGACCGAGCACGCTTCGGTACGCGAGGATGCC
AACATCGCTGGCGAACCGCGTGACAGGCTCACGTTCGTCGACGCCGTGGCAACAGCCGCGTCGACGCGGCAGCCGCTGGA
GGGATGCGACGATCCGGCCGCGCTCGGCGCATTGATGCGCGCCATCCAGATCACCGGCGTGCTCGAACGCGTGCTGAATC
AGACCGTGCAATACGCCACCGAACGCATCCAGTTTGGCCGGCCCATCGGCAAGTTCCAGGCGATCCAGCAACAGCTTGCA
GTGCTCGCCAACGAAGTGGTCGCCTCGCGCATGGCCGTGGCCAGCGCCTGCGCGGCGTTGTCGGGCAAGGACTGGGCACA
GCAGGCCATGATCGCCAAGATCATCTGTGGTCTGGCCGCCGGCCGCGCACCCGCGATCGCGCACCAGGTGCATGGCGCCA
TCGGCTTCACGCGCGAGCACTCGCTGCACTACGCCACGCGGCGCCTGTGGTCCTGGCGCGCCGAGTACGGCAGCGAGGCG
CAATGGGCCGCGAAGCTCGGCAAGATGGCAATCGAACACGGCGGCGACACGCTGTGGGAAAGACTGACGGAGGCCGCATG
A

Upstream 100 bases:

>100_bases
CGACGCAAGCCTACCTGACCCAGAGTGTGCCCTCGTTCTCCCTGCGGGGCGGCACGCGTGAAATTCTGCGGGGAATCATT
GCGCGAGGACTGGGAATCCG

Downstream 100 bases:

>100_bases
ATACACGTCGAGCCCTTCTCGCGATGATTGGCCTGCTGACGCTGTCGGCGTCAGTCCATGCGGAAACGGCCAAGGAATTC
CCATCGCGGCCGATTCGCGT

Product: putative Acyl-CoA dehydrogenase

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase-Like; Isovaleryl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase Type 2 Domain-Containing Protein; Acyl-CoA Dehydrogenase Protein; Cyclohexanecarboxyl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase C-Terminal Domain-Containing; Acyl-CoA Dehydrogenase C-; Acetyl-CoA Acetyltransferase; Acyl-CoA Dehydrogenase C-Terminal Domain Protein

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNELEQMLTDSAERLFGNEVTLEQSEAMERGEFPQSLWNAVDKSGLVHVLASEEAGGANASWTEALPVMLAAGRTVTPLP
FVDAATATWLLSRLGIEAPQGLLALADLSAAPTASQDGDTWRLSAEVEVPWGRHAQHVLVRAANAWLLLPTEHASVREDA
NIAGEPRDRLTFVDAVATAASTRQPLEGCDDPAALGALMRAIQITGVLERVLNQTVQYATERIQFGRPIGKFQAIQQQLA
VLANEVVASRMAVASACAALSGKDWAQQAMIAKIICGLAAGRAPAIAHQVHGAIGFTREHSLHYATRRLWSWRAEYGSEA
QWAAKLGKMAIEHGGDTLWERLTEAA

Sequences:

>Translated_346_residues
MNELEQMLTDSAERLFGNEVTLEQSEAMERGEFPQSLWNAVDKSGLVHVLASEEAGGANASWTEALPVMLAAGRTVTPLP
FVDAATATWLLSRLGIEAPQGLLALADLSAAPTASQDGDTWRLSAEVEVPWGRHAQHVLVRAANAWLLLPTEHASVREDA
NIAGEPRDRLTFVDAVATAASTRQPLEGCDDPAALGALMRAIQITGVLERVLNQTVQYATERIQFGRPIGKFQAIQQQLA
VLANEVVASRMAVASACAALSGKDWAQQAMIAKIICGLAAGRAPAIAHQVHGAIGFTREHSLHYATRRLWSWRAEYGSEA
QWAAKLGKMAIEHGGDTLWERLTEAA
>Mature_346_residues
MNELEQMLTDSAERLFGNEVTLEQSEAMERGEFPQSLWNAVDKSGLVHVLASEEAGGANASWTEALPVMLAAGRTVTPLP
FVDAATATWLLSRLGIEAPQGLLALADLSAAPTASQDGDTWRLSAEVEVPWGRHAQHVLVRAANAWLLLPTEHASVREDA
NIAGEPRDRLTFVDAVATAASTRQPLEGCDDPAALGALMRAIQITGVLERVLNQTVQYATERIQFGRPIGKFQAIQQQLA
VLANEVVASRMAVASACAALSGKDWAQQAMIAKIICGLAAGRAPAIAHQVHGAIGFTREHSLHYATRRLWSWRAEYGSEA
QWAAKLGKMAIEHGGDTLWERLTEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.3

Molecular weight: Translated: 37239; Mature: 37239

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELEQMLTDSAERLFGNEVTLEQSEAMERGEFPQSLWNAVDKSGLVHVLASEEAGGANA
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCC
SWTEALPVMLAAGRTVTPLPFVDAATATWLLSRLGIEAPQGLLALADLSAAPTASQDGDT
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCE
WRLSAEVEVPWGRHAQHVLVRAANAWLLLPTEHASVREDANIAGEPRDRLTFVDAVATAA
EEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
STRQPLEGCDDPAALGALMRAIQITGVLERVLNQTVQYATERIQFGRPIGKFQAIQQQLA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VLANEVVASRMAVASACAALSGKDWAQQAMIAKIICGLAAGRAPAIAHQVHGAIGFTREH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
SLHYATRRLWSWRAEYGSEAQWAAKLGKMAIEHGGDTLWERLTEAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MNELEQMLTDSAERLFGNEVTLEQSEAMERGEFPQSLWNAVDKSGLVHVLASEEAGGANA
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCC
SWTEALPVMLAAGRTVTPLPFVDAATATWLLSRLGIEAPQGLLALADLSAAPTASQDGDT
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCE
WRLSAEVEVPWGRHAQHVLVRAANAWLLLPTEHASVREDANIAGEPRDRLTFVDAVATAA
EEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
STRQPLEGCDDPAALGALMRAIQITGVLERVLNQTVQYATERIQFGRPIGKFQAIQQQLA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VLANEVVASRMAVASACAALSGKDWAQQAMIAKIICGLAAGRAPAIAHQVHGAIGFTREH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
SLHYATRRLWSWRAEYGSEAQWAAKLGKMAIEHGGDTLWERLTEAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA