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The map label for this gene is hpsA [H]

Identifier: 94314191

GI number: 94314191

Start: 1971643

End: 1972362

Strand: Direct

Name: hpsA [H]

Synonym: Rmet_5272

Alternate gene names: 94314191

Gene position: 1971643-1972362 (Clockwise)

Preceding gene: 94314190

Following gene: 94314192

Centisome position: 76.42

GC content: 65.83

Gene sequence:

>720_bases
ATGTCCGAGCTCACCCCTGCCCTGCGCGCCGCGCTGAAAACCGTCAGCACCGCCACGCTGTGCACCGCGCTGTTCAAGCG
CGGGCTGCGCAACCAGTTCATCCAGGACGTGCGGCCGATCCAGTCCAACCCCGGCACGATGGTCGGCGAAGCGTTCACGC
TGCGCTATATCCCGGCGCGCGAGGACCTGAATCCGATCACCGTGTTCCAGGACCCGAACCATCCGCAACGCCAGGCCATC
GAGCAATGCCCGCCCGGCGCGGTGCTGGTCATCGACAGCAGGAAAGACGCGCGCGCCGCATCCGCGGGCTCGATCCTGGT
GACCCGACTGATGCAACGTGGCGGCGCCGGCATCGTGACCGACGGCGGCTTCCGCGATTCTCCTGAAATCGCGCAGATGG
CGATGCCCGCCTATCACCATCGCCCATCTGCCCCGACCAATCTCACGCTCCACCAGGCGCTGGAATTCAACGTGCCGATC
GGCTGCGGCGATGTGGCGGTGTTTCCCGGCGATGTGATCGTCGGCGACGCGGAAGGCGTGGTCGTGATCCCGCAGGAAAT
GGTGGAGGACATCGCCGCCGAAGCGGTGGAGATGACCGCGTTCGAGGACTTCGTGACCGAGGAGGTACGCAAGGGCCGCT
CGATCATCGGGCTGTATCCGCCCACCACCGAAAAAGCGCGCGAGGATTTCGCGGTCTGGCGGAAGGAAAACAGGCGGTAA

Upstream 100 bases:

>100_bases
TCTCGCCATATCCGCCAGGCCAACGACGGCTGCGATTTCGATTTCCTGCAAACCGACTTCGGCGAAGCCGCCGGCGAACC
GAGCATCTACTGAACCCGCC

Downstream 100 bases:

>100_bases
CGCGTTCGGTCTCCCCTCTCCCACAACGTGGGCGAGGGGAGCGCATCACAAACGATAACGATAAAGATCGGGAGACCCCA
TGTTGAAGACAGCCCGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSELTPALRAALKTVSTATLCTALFKRGLRNQFIQDVRPIQSNPGTMVGEAFTLRYIPAREDLNPITVFQDPNHPQRQAI
EQCPPGAVLVIDSRKDARAASAGSILVTRLMQRGGAGIVTDGGFRDSPEIAQMAMPAYHHRPSAPTNLTLHQALEFNVPI
GCGDVAVFPGDVIVGDAEGVVVIPQEMVEDIAAEAVEMTAFEDFVTEEVRKGRSIIGLYPPTTEKAREDFAVWRKENRR

Sequences:

>Translated_239_residues
MSELTPALRAALKTVSTATLCTALFKRGLRNQFIQDVRPIQSNPGTMVGEAFTLRYIPAREDLNPITVFQDPNHPQRQAI
EQCPPGAVLVIDSRKDARAASAGSILVTRLMQRGGAGIVTDGGFRDSPEIAQMAMPAYHHRPSAPTNLTLHQALEFNVPI
GCGDVAVFPGDVIVGDAEGVVVIPQEMVEDIAAEAVEMTAFEDFVTEEVRKGRSIIGLYPPTTEKAREDFAVWRKENRR
>Mature_238_residues
SELTPALRAALKTVSTATLCTALFKRGLRNQFIQDVRPIQSNPGTMVGEAFTLRYIPAREDLNPITVFQDPNHPQRQAIE
QCPPGAVLVIDSRKDARAASAGSILVTRLMQRGGAGIVTDGGFRDSPEIAQMAMPAYHHRPSAPTNLTLHQALEFNVPIG
CGDVAVFPGDVIVGDAEGVVVIPQEMVEDIAAEAVEMTAFEDFVTEEVRKGRSIIGLYPPTTEKAREDFAVWRKENRR

Specific function: Catalyzes the condensation of ribulose 5-phosphate with formaldehyde to form 3-hexulose 6-phosphate [H]

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HPS/KGPDC family. HPS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017120
- InterPro:   IPR001754
- InterPro:   IPR011060
- InterPro:   IPR005493 [H]

Pfam domain/function: PF03737 Methyltransf_6; PF00215 OMPdecase [H]

EC number: =4.1.2.43 [H]

Molecular weight: Translated: 26093; Mature: 25962

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTPALRAALKTVSTATLCTALFKRGLRNQFIQDVRPIQSNPGTMVGEAFTLRYIPAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEEECCC
EDLNPITVFQDPNHPQRQAIEQCPPGAVLVIDSRKDARAASAGSILVTRLMQRGGAGIVT
CCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHCCCEEEE
DGGFRDSPEIAQMAMPAYHHRPSAPTNLTLHQALEFNVPIGCGDVAVFPGDVIVGDAEGV
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHEEECCCCCCCCEEECCCCEEEECCCCE
VVIPQEMVEDIAAEAVEMTAFEDFVTEEVRKGRSIIGLYPPTTEKAREDFAVWRKENRR
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SELTPALRAALKTVSTATLCTALFKRGLRNQFIQDVRPIQSNPGTMVGEAFTLRYIPAR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEEECCC
EDLNPITVFQDPNHPQRQAIEQCPPGAVLVIDSRKDARAASAGSILVTRLMQRGGAGIVT
CCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHCCCEEEE
DGGFRDSPEIAQMAMPAYHHRPSAPTNLTLHQALEFNVPIGCGDVAVFPGDVIVGDAEGV
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHEEECCCCCCCCEEECCCCEEEECCCCE
VVIPQEMVEDIAAEAVEMTAFEDFVTEEVRKGRSIIGLYPPTTEKAREDFAVWRKENRR
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA