| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314188
Identifier: 94314188
GI number: 94314188
Start: 1967713
End: 1969305
Strand: Direct
Name: 94314188
Synonym: Rmet_5269
Alternate gene names: NA
Gene position: 1967713-1969305 (Clockwise)
Preceding gene: 94314187
Following gene: 94314190
Centisome position: 76.27
GC content: 67.55
Gene sequence:
>1593_bases ATGACGCGGGAGTGCATGGGCAGTTGCCTGCACAGTAGGACAACCACTACGATAGCGGCACCGCACCATCATCAGAACAA GGCCGGCGCCACGTTGCGCCCGGCAGCCAGCGAGACAACCCCGATGTCAACCTCTCCCGGCCATACCGGCCAGCCCGACA ACACCGCGCCATTGCAGGAAACCCCATCACCCAAACCTGCGCCGCTCGGCGGCCGGCCCGCCGATTCGATCCGCGCGGCA TTGCTGATCGCCGCGTGCATCAGCGTGGTATGGATCGCAGGGCAGTGGCTGCAGGCGCCGCCTGCGCTGATCTGGGCCGG CGCGCTGGTGTTGTCGACGGTGTGCTGCTGGGCAGTCGGGGCGCTACCTGAGCCCACCGCCACACTGCTCTTCTTCCTTG CCGCGGTGGTGTTCCATATTGCCCCGCCAAAGGTGGTGTTCTCGGGGTTCACATCCACCGCGTGGTGGCTGATGTTTGGT GGCGCCGTCACCGGCGTGGCGTTGCGCAACACGGGACTGGCGCTGCGGCTGGCCGACATCATCTTCCACAAGCGCGTTGG CACCTATCCGCAGGTGATCACCACGGTGGCGCTCAGCGCGGTGGGCCTGGCCTTCCTGATGCCCTCCACCACGGGCCGCG TGCTGCTGCTGATGCCGATCGTGCTGGCGCTGGCCGACCGCCTTGGCTTCGCGCCCGGCTCCAACGGCCGCATCGGCATG GTGCTGACCGTGGCGGCCGCGAGCTACATGCCGCCTACGTCGATCCTGCCCGCCAATATTCCGAACAGCGTGCTCTTGGG CGCTGCCAGTTCGCTCTATGGCATCAACCTGAGCTACGGCAGCTATCTGCTGCTGCACTTCCCGGTGCTCGGCGTGCTGA AGACCGTGGTGCTGATCTGGGTAATCTGCCGCATGTTCCCGGACAGCGGGCCGATCGCGCCGCAAGCCGCCAGCGTCCGC ACGCAGATGGGGCCGCAGGAGCGCGCGCTGGCGATCATCCTGGCGCTGGCCGTGGCGGGCTTTGCCACGGATGCCTGGCA TGGCGTATCGCCCGCGTGGATCTCGCTGGCTGCGTGCATCATCTGCCTGCTGCCGGGCATCGGGCTGGTATCACCCAAGG CCATGACCGAGCAGGTCCACCTGGTACCGCTGATCTACGTGGCTGGCTTCCTGGGGCTGGGCGCGGTGGTCGAATCGACG GGCCTGGGCAGCGCGATCAGCGCGGGGCTGCTGCACTGGCTGCCGATGACGCCCGGCCACACCGCGGCGAATGTCGGCAC GATTGGCGCGATGGGCGCGGTCATCGGCATGTTGTCCACGCTGCCGGCCCTGCCGGCCGTGCTGACGCCACTTGCCGCCG ATCTGGCGAAGGCCACCGGATTGCCGCTTGAATCCGTGCTGATGCTGCAGGTGCCGGTGTTCTCCACCGTATTCTTCCCG TACCAGTCACCGCCGATCATGATCGCGATGCAACTGGGCGGCGTGGGCCTGCGGCACGGCACGCGCCTGTGCCTGACCAT GGCGGCCATCACGATCGTGGCGCTGCTGCCGCTGGACTATCTCTGGTGGCGCCTGCTGGGCTACCTGCCCTGA
Upstream 100 bases:
>100_bases GGCCGACGGCGATCATGCGTTGACCGGAAGCGAGCGAATCAACCTGACGTTTCGCAAGACCCGCTAAGCAAGACCGCCAA GCAAGACCCAAGACCCGCCA
Downstream 100 bases:
>100_bases ACCACCCAGCCCCCTAACCTGACAACCGCACAACCGCACAACCTCACGACCTCACCACTCCAGCCTGTCGATCTCCGCGT CGCTCAAGGTGGTGCCCGGC
Product: sodium/sulfate symporter
Products: NA
Alternate protein names: Citrate Transporter; Sodium/Solute Symporter Protein; Conserved Integral Membrane Protein; SodiumSulfate Symporter Family Protein; Sodium/Sulfate Symporter; Anion Transporter; Sodium Symporter Transmembrane Region; Di- And Tricarboxylate Transporters; DASS Family Na(+)/Divalent Anion Symporter; SodiumSulfate Symporter
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTRECMGSCLHSRTTTTIAAPHHHQNKAGATLRPAASETTPMSTSPGHTGQPDNTAPLQETPSPKPAPLGGRPADSIRAA LLIAACISVVWIAGQWLQAPPALIWAGALVLSTVCCWAVGALPEPTATLLFFLAAVVFHIAPPKVVFSGFTSTAWWLMFG GAVTGVALRNTGLALRLADIIFHKRVGTYPQVITTVALSAVGLAFLMPSTTGRVLLLMPIVLALADRLGFAPGSNGRIGM VLTVAAASYMPPTSILPANIPNSVLLGAASSLYGINLSYGSYLLLHFPVLGVLKTVVLIWVICRMFPDSGPIAPQAASVR TQMGPQERALAIILALAVAGFATDAWHGVSPAWISLAACIICLLPGIGLVSPKAMTEQVHLVPLIYVAGFLGLGAVVEST GLGSAISAGLLHWLPMTPGHTAANVGTIGAMGAVIGMLSTLPALPAVLTPLAADLAKATGLPLESVLMLQVPVFSTVFFP YQSPPIMIAMQLGGVGLRHGTRLCLTMAAITIVALLPLDYLWWRLLGYLP
Sequences:
>Translated_530_residues MTRECMGSCLHSRTTTTIAAPHHHQNKAGATLRPAASETTPMSTSPGHTGQPDNTAPLQETPSPKPAPLGGRPADSIRAA LLIAACISVVWIAGQWLQAPPALIWAGALVLSTVCCWAVGALPEPTATLLFFLAAVVFHIAPPKVVFSGFTSTAWWLMFG GAVTGVALRNTGLALRLADIIFHKRVGTYPQVITTVALSAVGLAFLMPSTTGRVLLLMPIVLALADRLGFAPGSNGRIGM VLTVAAASYMPPTSILPANIPNSVLLGAASSLYGINLSYGSYLLLHFPVLGVLKTVVLIWVICRMFPDSGPIAPQAASVR TQMGPQERALAIILALAVAGFATDAWHGVSPAWISLAACIICLLPGIGLVSPKAMTEQVHLVPLIYVAGFLGLGAVVEST GLGSAISAGLLHWLPMTPGHTAANVGTIGAMGAVIGMLSTLPALPAVLTPLAADLAKATGLPLESVLMLQVPVFSTVFFP YQSPPIMIAMQLGGVGLRHGTRLCLTMAAITIVALLPLDYLWWRLLGYLP >Mature_529_residues TRECMGSCLHSRTTTTIAAPHHHQNKAGATLRPAASETTPMSTSPGHTGQPDNTAPLQETPSPKPAPLGGRPADSIRAAL LIAACISVVWIAGQWLQAPPALIWAGALVLSTVCCWAVGALPEPTATLLFFLAAVVFHIAPPKVVFSGFTSTAWWLMFGG AVTGVALRNTGLALRLADIIFHKRVGTYPQVITTVALSAVGLAFLMPSTTGRVLLLMPIVLALADRLGFAPGSNGRIGMV LTVAAASYMPPTSILPANIPNSVLLGAASSLYGINLSYGSYLLLHFPVLGVLKTVVLIWVICRMFPDSGPIAPQAASVRT QMGPQERALAIILALAVAGFATDAWHGVSPAWISLAACIICLLPGIGLVSPKAMTEQVHLVPLIYVAGFLGLGAVVESTG LGSAISAGLLHWLPMTPGHTAANVGTIGAMGAVIGMLSTLPALPAVLTPLAADLAKATGLPLESVLMLQVPVFSTVFFPY QSPPIMIAMQLGGVGLRHGTRLCLTMAAITIVALLPLDYLWWRLLGYLP
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55131; Mature: 55000
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRECMGSCLHSRTTTTIAAPHHHQNKAGATLRPAASETTPMSTSPGHTGQPDNTAPLQE CCHHHHHHHHHCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TPSPKPAPLGGRPADSIRAALLIAACISVVWIAGQWLQAPPALIWAGALVLSTVCCWAVG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC ALPEPTATLLFFLAAVVFHIAPPKVVFSGFTSTAWWLMFGGAVTGVALRNTGLALRLADI CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCHHHHHEEECCCHHHHHHHH IFHKRVGTYPQVITTVALSAVGLAFLMPSTTGRVLLLMPIVLALADRLGFAPGSNGRIGM HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE VLTVAAASYMPPTSILPANIPNSVLLGAASSLYGINLSYGSYLLLHFPVLGVLKTVVLIW EEEEHHHHCCCCCCCCCCCCCCHHHHHCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHH VICRMFPDSGPIAPQAASVRTQMGPQERALAIILALAVAGFATDAWHGVSPAWISLAACI HHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ICLLPGIGLVSPKAMTEQVHLVPLIYVAGFLGLGAVVESTGLGSAISAGLLHWLPMTPGH HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC TAANVGTIGAMGAVIGMLSTLPALPAVLTPLAADLAKATGLPLESVLMLQVPVFSTVFFP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECC YQSPPIMIAMQLGGVGLRHGTRLCLTMAAITIVALLPLDYLWWRLLGYLP CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRECMGSCLHSRTTTTIAAPHHHQNKAGATLRPAASETTPMSTSPGHTGQPDNTAPLQE CHHHHHHHHHCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TPSPKPAPLGGRPADSIRAALLIAACISVVWIAGQWLQAPPALIWAGALVLSTVCCWAVG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC ALPEPTATLLFFLAAVVFHIAPPKVVFSGFTSTAWWLMFGGAVTGVALRNTGLALRLADI CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCHHHHHEEECCCHHHHHHHH IFHKRVGTYPQVITTVALSAVGLAFLMPSTTGRVLLLMPIVLALADRLGFAPGSNGRIGM HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE VLTVAAASYMPPTSILPANIPNSVLLGAASSLYGINLSYGSYLLLHFPVLGVLKTVVLIW EEEEHHHHCCCCCCCCCCCCCCHHHHHCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHH VICRMFPDSGPIAPQAASVRTQMGPQERALAIILALAVAGFATDAWHGVSPAWISLAACI HHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ICLLPGIGLVSPKAMTEQVHLVPLIYVAGFLGLGAVVESTGLGSAISAGLLHWLPMTPGH HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC TAANVGTIGAMGAVIGMLSTLPALPAVLTPLAADLAKATGLPLESVLMLQVPVFSTVFFP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECC YQSPPIMIAMQLGGVGLRHGTRLCLTMAAITIVALLPLDYLWWRLLGYLP CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA