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The map label for this gene is ycjY [C]

Identifier: 94314146

GI number: 94314146

Start: 1922427

End: 1923374

Strand: Reverse

Name: ycjY [C]

Synonym: Rmet_5227

Alternate gene names: 94314146

Gene position: 1923374-1922427 (Counterclockwise)

Preceding gene: 94314147

Following gene: 94314145

Centisome position: 74.55

GC content: 63.19

Gene sequence:

>948_bases
ATGGTCAGCATTGATTCTTCCTTCCAAAGCCACGGTGAGCGTTGCGCGGCCACGCTGATGCTGCCGAGCCAGGGGACGCG
CCCGCCCGTCATCATCATGGCGCACGGATTCGGCGCCATTCGCGCCGCCGGTCTGTCTGCCTTTGCCGAGCGGTTCGTGG
CCGAAGGCTACGCCGCATATCTCTTCGATTACCGGAACTTCGGCGACAGCGAAGGCAAGCCGCGGCACTGGGTCAGCCCG
CGCCGCCACCTGCAGGACTGGGCCGCTGCCATCGCACATATGAGCTCACTCCCAGAGGTTGACGCCGATCGCATGGTGTT
GTGGGGGACATCGTTCTCGGGCGGGCACGTCATCCAGACTGCTGCTGCAGATCATCGGGTCCGAGCCGTCATTGCCCAAG
TCCCGCATGTCAGTGGGCTGGCCAGCATGAAGCAGGTACCCTTCCATCTCTTGCTGCGCATGATGCTTGCGGCCATGCGC
GACCTCTGCGGCAGCGTCATTCGTCGCGAGCACTACAGCCCGATCATCGGTCGTCACGGTGATATGGCCGCGTTGACCGG
CGACGACGCTTGGCATGGTTATGCAAGGCTGCTGCCTGCGGGAACGGCGTGGGAGAACAAGGTACTGTCGCGCATCTTTC
TGGAGGTGCCACTCTACAGCCCGATTCGCCACGCGCACAAGGTCGCCGCGCCTACCTTGATCGTGGCCGGAACCCATGAC
ACGATCACCCCGGCCAGTGCCGCGCGACGGGCGTCCAGGCGCATACCGTACTGCGAGTTCCATCTCGTGGAAGGTAACCA
CTTTGAGCTGCATTTGCACGATGAACCGGCGTTCGCAAGCAGTATCGCGGCGCAGTTAGCTTTTCTGAACCGGCACGTTG
GTGTCGCCCCCATCGCCCTCGAAAAAAGCGGCCGAGATCATCGTGCGGGCAGTGGCAGCCGACCGTGA

Upstream 100 bases:

>100_bases
ACGACGGTGGCGCGCGGCCGGCCAGCCTGCGACCTTGTGGCAACCAGCATGGACGAAACAGCCGTGTGAGGTTCAGCCGC
ATTCCGCATCGGAGCCTTGC

Downstream 100 bases:

>100_bases
ACACGTGCTGTTGGGCGTCGCAATTTTCCATGTGTGCTGCACTTGGAGCATGAAACCCTCTGCTGTAATGTCTAGGAGCC
GTGATGTCGATGAAGGATCT

Product: putative alpha/beta superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MVSIDSSFQSHGERCAATLMLPSQGTRPPVIIMAHGFGAIRAAGLSAFAERFVAEGYAAYLFDYRNFGDSEGKPRHWVSP
RRHLQDWAAAIAHMSSLPEVDADRMVLWGTSFSGGHVIQTAAADHRVRAVIAQVPHVSGLASMKQVPFHLLLRMMLAAMR
DLCGSVIRREHYSPIIGRHGDMAALTGDDAWHGYARLLPAGTAWENKVLSRIFLEVPLYSPIRHAHKVAAPTLIVAGTHD
TITPASAARRASRRIPYCEFHLVEGNHFELHLHDEPAFASSIAAQLAFLNRHVGVAPIALEKSGRDHRAGSGSRP

Sequences:

>Translated_315_residues
MVSIDSSFQSHGERCAATLMLPSQGTRPPVIIMAHGFGAIRAAGLSAFAERFVAEGYAAYLFDYRNFGDSEGKPRHWVSP
RRHLQDWAAAIAHMSSLPEVDADRMVLWGTSFSGGHVIQTAAADHRVRAVIAQVPHVSGLASMKQVPFHLLLRMMLAAMR
DLCGSVIRREHYSPIIGRHGDMAALTGDDAWHGYARLLPAGTAWENKVLSRIFLEVPLYSPIRHAHKVAAPTLIVAGTHD
TITPASAARRASRRIPYCEFHLVEGNHFELHLHDEPAFASSIAAQLAFLNRHVGVAPIALEKSGRDHRAGSGSRP
>Mature_315_residues
MVSIDSSFQSHGERCAATLMLPSQGTRPPVIIMAHGFGAIRAAGLSAFAERFVAEGYAAYLFDYRNFGDSEGKPRHWVSP
RRHLQDWAAAIAHMSSLPEVDADRMVLWGTSFSGGHVIQTAAADHRVRAVIAQVPHVSGLASMKQVPFHLLLRMMLAAMR
DLCGSVIRREHYSPIIGRHGDMAALTGDDAWHGYARLLPAGTAWENKVLSRIFLEVPLYSPIRHAHKVAAPTLIVAGTHD
TITPASAARRASRRIPYCEFHLVEGNHFELHLHDEPAFASSIAAQLAFLNRHVGVAPIALEKSGRDHRAGSGSRP

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34431; Mature: 34431

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIDSSFQSHGERCAATLMLPSQGTRPPVIIMAHGFGAIRAAGLSAFAERFVAEGYAAY
CCCCCCHHHHHHHHEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHH
LFDYRNFGDSEGKPRHWVSPRRHLQDWAAAIAHMSSLPEVDADRMVLWGTSFSGGHVIQT
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEE
AAADHRVRAVIAQVPHVSGLASMKQVPFHLLLRMMLAAMRDLCGSVIRREHYSPIIGRHG
CHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DMAALTGDDAWHGYARLLPAGTAWENKVLSRIFLEVPLYSPIRHAHKVAAPTLIVAGTHD
CEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCC
TITPASAARRASRRIPYCEFHLVEGNHFELHLHDEPAFASSIAAQLAFLNRHVGVAPIAL
CCCCHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEE
EKSGRDHRAGSGSRP
ECCCCCCCCCCCCCC
>Mature Secondary Structure
MVSIDSSFQSHGERCAATLMLPSQGTRPPVIIMAHGFGAIRAAGLSAFAERFVAEGYAAY
CCCCCCHHHHHHHHEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHH
LFDYRNFGDSEGKPRHWVSPRRHLQDWAAAIAHMSSLPEVDADRMVLWGTSFSGGHVIQT
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEE
AAADHRVRAVIAQVPHVSGLASMKQVPFHLLLRMMLAAMRDLCGSVIRREHYSPIIGRHG
CHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DMAALTGDDAWHGYARLLPAGTAWENKVLSRIFLEVPLYSPIRHAHKVAAPTLIVAGTHD
CEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCC
TITPASAARRASRRIPYCEFHLVEGNHFELHLHDEPAFASSIAAQLAFLNRHVGVAPIAL
CCCCHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEE
EKSGRDHRAGSGSRP
ECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916281 [H]