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The map label for this gene is mmgC [H]

Identifier: 94314063

GI number: 94314063

Start: 1842575

End: 1843732

Strand: Reverse

Name: mmgC [H]

Synonym: Rmet_5144

Alternate gene names: 94314063

Gene position: 1843732-1842575 (Counterclockwise)

Preceding gene: 94314064

Following gene: 94314062

Centisome position: 71.46

GC content: 64.68

Gene sequence:

>1158_bases
TTGAATCATCTACTCGATACCTTTCATCTCGCGCAGTTGCCCCCGGAGGCGGAGGCGTTTCGCGCCGAGGTGAAGGCCTT
TCTCGCGGACATGCAACCCAAGGCCCCACCAAGCAAGCGGGCCAGGTCGTGGATGGGCTTTGACGCTGATTTCAGCCGGA
AGCTTGCCGGCCGCGGATGGGTAGGCATTACCTTGCCGGCGCAGTACGGCGGCGCCGGCCTGGATCCGTTCCGACGATTC
GTGCTGGTCGAGGAGTTGCTGAGCGCTGGAGCCCCCGTCGCAGCGCATTGGATCGCGGATCGGCAAAGCGGGCCGCTGAT
CCTCAGGTACGGCACGGAGGCGCAGAAGGCGGCTTACCTGCCGAAGATATGTCGTGGCGAGGCGTTCTTCTGCATTGGCA
TGAGCGAGCCGAACTCGGGCTCCGACCTGGCGAGTGTCCGGACGCGCGCGACGCCGGCTGCGGATGGCTGGGTCCTGAAT
GGCCAGAAGATCTGGACGACCAACGCGCAGCATTGTCAGTACATGATCGCGCTGGTCCGTACCTCAGGGGTTCCCGAGGA
CAAGCAGAAGGGGTTGTCCCAGTTCATCATCGATCTTTCCCTGCCCGGCGTGACCGTGCGTCCCATCCGGGACCTCACGG
GCGACGCGCACTTCGCCGAGGTGGTATTCGAGAATGTGGCGCTGCGGTCGGATGCCCTGATTGGCGAAGAAGGCAGTGGT
TGGGAGCAGGTGAACGCGGAACTGGCATTCGAGCGCAGCGGCCCGGAGCGCATCTATTCCAGCATCGTCCTGCTGGATGC
CTGGATCGAACAGCTTCGCCGCACGGAAGCGACCCGGGACCAGGTGGCCGCGCTTGGCCGCTTCGTCACGCATGTGGCGA
CGTTGCGCAACATGTCGATCGCCGTGACATCGAAGCTGGCACGCCATGAGAGCCCGGTGGTCGAAGCGGCGTTGGTCAAG
GATCTGGGTACCGAGCTGGAGCAGGCGATTCCGGCCTATCTGGAAGCGGCGATCGCCTCGGACCCGGAGGCGGCCGGCGA
TGGCGAGCTGCTGCGCACGGTGGCCTATCTGAGCCAGATTTCCCCGACGTTCTCGTTGCGTGGCGGCACGCGAGAGATTC
TCCGCGGCATGATCGCCCGTAGCCTCGGGCTGCGCTAA

Upstream 100 bases:

>100_bases
GATGTGAGGCACCGGTTGCCGGCGTGTTGCGGACACACGGCAGCACCGTGCCGGTTTTTTGCACTGACGCCTGGCGGCAG
TGCCAGATCAGGAGTTTTCA

Downstream 100 bases:

>100_bases
CACGAAGGAGGACAGTGAATGTTCGTAGAAGCCATCGCAAATATTCTGAAAGACCGTTTCTCGCCGCAGGCGCTCCGGAA
GATTGGACAAGGCGTTGAAG

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNHLLDTFHLAQLPPEAEAFRAEVKAFLADMQPKAPPSKRARSWMGFDADFSRKLAGRGWVGITLPAQYGGAGLDPFRRF
VLVEELLSAGAPVAAHWIADRQSGPLILRYGTEAQKAAYLPKICRGEAFFCIGMSEPNSGSDLASVRTRATPAADGWVLN
GQKIWTTNAQHCQYMIALVRTSGVPEDKQKGLSQFIIDLSLPGVTVRPIRDLTGDAHFAEVVFENVALRSDALIGEEGSG
WEQVNAELAFERSGPERIYSSIVLLDAWIEQLRRTEATRDQVAALGRFVTHVATLRNMSIAVTSKLARHESPVVEAALVK
DLGTELEQAIPAYLEAAIASDPEAAGDGELLRTVAYLSQISPTFSLRGGTREILRGMIARSLGLR

Sequences:

>Translated_385_residues
MNHLLDTFHLAQLPPEAEAFRAEVKAFLADMQPKAPPSKRARSWMGFDADFSRKLAGRGWVGITLPAQYGGAGLDPFRRF
VLVEELLSAGAPVAAHWIADRQSGPLILRYGTEAQKAAYLPKICRGEAFFCIGMSEPNSGSDLASVRTRATPAADGWVLN
GQKIWTTNAQHCQYMIALVRTSGVPEDKQKGLSQFIIDLSLPGVTVRPIRDLTGDAHFAEVVFENVALRSDALIGEEGSG
WEQVNAELAFERSGPERIYSSIVLLDAWIEQLRRTEATRDQVAALGRFVTHVATLRNMSIAVTSKLARHESPVVEAALVK
DLGTELEQAIPAYLEAAIASDPEAAGDGELLRTVAYLSQISPTFSLRGGTREILRGMIARSLGLR
>Mature_385_residues
MNHLLDTFHLAQLPPEAEAFRAEVKAFLADMQPKAPPSKRARSWMGFDADFSRKLAGRGWVGITLPAQYGGAGLDPFRRF
VLVEELLSAGAPVAAHWIADRQSGPLILRYGTEAQKAAYLPKICRGEAFFCIGMSEPNSGSDLASVRTRATPAADGWVLN
GQKIWTTNAQHCQYMIALVRTSGVPEDKQKGLSQFIIDLSLPGVTVRPIRDLTGDAHFAEVVFENVALRSDALIGEEGSG
WEQVNAELAFERSGPERIYSSIVLLDAWIEQLRRTEATRDQVAALGRFVTHVATLRNMSIAVTSKLARHESPVVEAALVK
DLGTELEQAIPAYLEAAIASDPEAAGDGELLRTVAYLSQISPTFSLRGGTREILRGMIARSLGLR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=387, Percent_Identity=25.5813953488372, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI226958414, Length=349, Percent_Identity=25.7879656160458, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4557233, Length=213, Percent_Identity=31.4553990610329, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI4501857, Length=385, Percent_Identity=24.4155844155844, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI21361497, Length=237, Percent_Identity=30.8016877637131, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4501859, Length=201, Percent_Identity=30.8457711442786, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557235, Length=198, Percent_Identity=32.8282828282828, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI76496475, Length=198, Percent_Identity=32.8282828282828, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI7656849, Length=197, Percent_Identity=28.9340101522843, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4557231, Length=202, Percent_Identity=27.2277227722772, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI187960098, Length=202, Percent_Identity=27.2277227722772, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI48976061, Length=323, Percent_Identity=27.2445820433437, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI211971008, Length=323, Percent_Identity=27.2445820433437, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI38505218, Length=162, Percent_Identity=30.2469135802469, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4503943, Length=127, Percent_Identity=34.6456692913386, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI7669494, Length=127, Percent_Identity=34.6456692913386, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=287, Percent_Identity=26.1324041811847, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786223, Length=323, Percent_Identity=25.077399380805, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538396, Length=244, Percent_Identity=31.5573770491803, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17506239, Length=189, Percent_Identity=33.8624338624339, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=188, Percent_Identity=34.5744680851064, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI32563615, Length=186, Percent_Identity=33.8709677419355, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=188, Percent_Identity=32.4468085106383, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=302, Percent_Identity=29.8013245033113, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=302, Percent_Identity=29.8013245033113, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17570075, Length=259, Percent_Identity=26.2548262548263, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=213, Percent_Identity=27.6995305164319, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=211, Percent_Identity=27.4881516587678, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=243, Percent_Identity=27.5720164609054, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=203, Percent_Identity=27.0935960591133, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17569725, Length=199, Percent_Identity=24.1206030150754, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=297, Percent_Identity=24.9158249158249, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355753, Length=207, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281363737, Length=227, Percent_Identity=32.5991189427313, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=239, Percent_Identity=29.7071129707113, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI21356377, Length=195, Percent_Identity=31.2820512820513, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24660351, Length=336, Percent_Identity=25.5952380952381, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24646207, Length=236, Percent_Identity=25.4237288135593, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19920834, Length=197, Percent_Identity=27.4111675126904, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41949; Mature: 41949

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLLDTFHLAQLPPEAEAFRAEVKAFLADMQPKAPPSKRARSWMGFDADFSRKLAGRGW
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCCCE
VGITLPAQYGGAGLDPFRRFVLVEELLSAGAPVAAHWIADRQSGPLILRYGTEAQKAAYL
EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCEEEEECCCHHHHHHC
PKICRGEAFFCIGMSEPNSGSDLASVRTRATPAADGWVLNGQKIWTTNAQHCQYMIALVR
HHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCEEECCCHHHHHHHHHHHH
TSGVPEDKQKGLSQFIIDLSLPGVTVRPIRDLTGDAHFAEVVFENVALRSDALIGEEGSG
HCCCCCHHHHHHHHHHHHHCCCCEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
WEQVNAELAFERSGPERIYSSIVLLDAWIEQLRRTEATRDQVAALGRFVTHVATLRNMSI
HHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVTSKLARHESPVVEAALVKDLGTELEQAIPAYLEAAIASDPEAAGDGELLRTVAYLSQI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
SPTFSLRGGTREILRGMIARSLGLR
CCCEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHLLDTFHLAQLPPEAEAFRAEVKAFLADMQPKAPPSKRARSWMGFDADFSRKLAGRGW
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCCCE
VGITLPAQYGGAGLDPFRRFVLVEELLSAGAPVAAHWIADRQSGPLILRYGTEAQKAAYL
EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCEEEEECCCHHHHHHC
PKICRGEAFFCIGMSEPNSGSDLASVRTRATPAADGWVLNGQKIWTTNAQHCQYMIALVR
HHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCEEECCCHHHHHHHHHHHH
TSGVPEDKQKGLSQFIIDLSLPGVTVRPIRDLTGDAHFAEVVFENVALRSDALIGEEGSG
HCCCCCHHHHHHHHHHHHHCCCCEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
WEQVNAELAFERSGPERIYSSIVLLDAWIEQLRRTEATRDQVAALGRFVTHVATLRNMSI
HHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVTSKLARHESPVVEAALVKDLGTELEQAIPAYLEAAIASDPEAAGDGELLRTVAYLSQI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
SPTFSLRGGTREILRGMIARSLGLR
CCCEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]