| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314031
Identifier: 94314031
GI number: 94314031
Start: 1805782
End: 1806180
Strand: Reverse
Name: 94314031
Synonym: Rmet_5112
Alternate gene names: NA
Gene position: 1806180-1805782 (Counterclockwise)
Preceding gene: 94314032
Following gene: 94314030
Centisome position: 70.0
GC content: 65.91
Gene sequence:
>399_bases ATGACGATTGCACCTCCATCCGGCGACCCGGCAACCACGTCTGCCGACGCCCACTACTTCCAGCGCCTCTCCGAAGGCGT GTTCGAAATCCCCCAGTGCCGCGACTGCGGCCGGCATCACTTCTTTCCGCGCGTCGTTTGCCCTCATTGCGGCTCCGTAG CGTTGCAGTGGGCCGCGCCGAGCGGTCTTGGCACCGTGTACTCGACCACGGTCGTGCGCAAAAAGGACGGGGATTACAAC GTGTGCCTGGTCGATCTCGACGAGGGGCCGCGCATGATGAGCTGCGTGATCGGTGTGGATCCCGACGCGGTGAGGATCGG GCACCGCGTCAGGGCGCAGGTGCAGCGCAAGGGCGAGGACGCATTGCTGGTGTTCGCGCCGGCCGGGGAGCGACAATGA
Upstream 100 bases:
>100_bases TGAATCCGGCCGAATTCCGCAAGTACGTCGAGACCGAAGTGGCCAAGTGGCAGAACATGGTCAAGATCACCGGCGTGCAG ATCGAGCAGTAAGGGGCCCC
Downstream 100 bases:
>100_bases GCGCGGCATTGAAGGCCACCGATCGTGGTGGCGTGGCGATTCTGGGCACGGGACTGGCGGGGCTCGGTCATGCAGGTGGC CGCACGGAGCAGGAAATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTIAPPSGDPATTSADAHYFQRLSEGVFEIPQCRDCGRHHFFPRVVCPHCGSVALQWAAPSGLGTVYSTTVVRKKDGDYN VCLVDLDEGPRMMSCVIGVDPDAVRIGHRVRAQVQRKGEDALLVFAPAGERQ
Sequences:
>Translated_132_residues MTIAPPSGDPATTSADAHYFQRLSEGVFEIPQCRDCGRHHFFPRVVCPHCGSVALQWAAPSGLGTVYSTTVVRKKDGDYN VCLVDLDEGPRMMSCVIGVDPDAVRIGHRVRAQVQRKGEDALLVFAPAGERQ >Mature_131_residues TIAPPSGDPATTSADAHYFQRLSEGVFEIPQCRDCGRHHFFPRVVCPHCGSVALQWAAPSGLGTVYSTTVVRKKDGDYNV CLVDLDEGPRMMSCVIGVDPDAVRIGHRVRAQVQRKGEDALLVFAPAGERQ
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14366; Mature: 14235
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAPPSGDPATTSADAHYFQRLSEGVFEIPQCRDCGRHHFFPRVVCPHCGSVALQWAAP CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEECCC SGLGTVYSTTVVRKKDGDYNVCLVDLDEGPRMMSCVIGVDPDAVRIGHRVRAQVQRKGED CCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC ALLVFAPAGERQ EEEEEECCCCCC >Mature Secondary Structure TIAPPSGDPATTSADAHYFQRLSEGVFEIPQCRDCGRHHFFPRVVCPHCGSVALQWAAP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEECCC SGLGTVYSTTVVRKKDGDYNVCLVDLDEGPRMMSCVIGVDPDAVRIGHRVRAQVQRKGED CCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC ALLVFAPAGERQ EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA