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The map label for this gene is dppC [C]

Identifier: 94314009

GI number: 94314009

Start: 1780109

End: 1781008

Strand: Direct

Name: dppC [C]

Synonym: Rmet_5090

Alternate gene names: 94314009

Gene position: 1780109-1781008 (Clockwise)

Preceding gene: 94314008

Following gene: 94314010

Centisome position: 68.99

GC content: 70.67

Gene sequence:

>900_bases
ATGACCGCTACCCTGCCCTCGCGCCAGGACGCCGCCGCACGGCCGGCGGACGACGACGCGCCGTTCGTGCTGCCCCGCTG
GTACTGGGCGCGCAAGCATCCCACCCTCGTCATTGGCGCCGTGCTCCTGCTGGCCGTTGCCGCGCTGGCGATCGCCGCGC
CGTGGATCTCGCCGTTCGACCCGCAGGACATTGACCCGCTGGCGCGTATGCAGCCGCCTTCCGCCGAACACTGGTTCGGC
ACCGATGCGCTGGGCCGCGACGTGTTCAGCCGCGCGGTCTGGGGCGGCCGCGTGTCGATGATCGTCGCCCTCTCGGTCGG
CCTGCTATCCACCGTGCTGGGCGTCAGCATCGGCCTGACCGCCGGCTTCGTGCGCTGGACCGACGGCTTTCTCATGCGCG
TGATGGACGGGCTGATGGCCATCCCGGGCATCCTGCTGGCGATCGCGCTGATGGCACTGACCCAGGCCAGCCTGGGTGCG
GTGATCGTCGCCATCACCGTCCCCGAGGTGCCGCGCGTGGTGCGGCTGGTTCGCTCGATGGCGCTGACCCTGCGCGAGCA
ACTGTACGTCGAAGCCGCGCACGCGGTTGGCACGCGGCTGCCGGTGATCCTGCTGCGCCACGTGCTGCCCAACATGGTCG
CGCCGCTGATCGTGCAGGCCACCTTTGTCGCGGCAGCGGCCGTTCTGACCGAGGCGGCGCTGTCCTTCCTCGGCGTGGGC
GTGCCGGCGCAGACGCCAAGCTGGGGCAACATCATGGCCGAGGGCCGCAACTTCGTTGCCGTGGCTTTCCACATCCTGCT
GTATCCCGGCCTGCTGCTGGCCGCCACCGTGCTCGCTATCAACCTGCTCGGCGACGGCCTGCGCGATGCGCTCGATCCGC
GCCTGGCGCGCCAACTCTGA

Upstream 100 bases:

>100_bases
GAGCGTGCTGCTGCTCTCGGCAGGTGCCTATGTGCTGATCAACCTGATGATCGACCTCAGCTACCGGCTGTTCGATCCCC
GCATCAAATACTGAGCCGCC

Downstream 100 bases:

>100_bases
GATGGGAACTGCCATGACGTCCACCCGCAAGGCACTCCCCGCCGGCACACCACTGCTGGAAGTACAGGACCTGCACGTGC
GCTTCGACACCCTGACCGGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTATLPSRQDAAARPADDDAPFVLPRWYWARKHPTLVIGAVLLLAVAALAIAAPWISPFDPQDIDPLARMQPPSAEHWFG
TDALGRDVFSRAVWGGRVSMIVALSVGLLSTVLGVSIGLTAGFVRWTDGFLMRVMDGLMAIPGILLAIALMALTQASLGA
VIVAITVPEVPRVVRLVRSMALTLREQLYVEAAHAVGTRLPVILLRHVLPNMVAPLIVQATFVAAAAVLTEAALSFLGVG
VPAQTPSWGNIMAEGRNFVAVAFHILLYPGLLLAATVLAINLLGDGLRDALDPRLARQL

Sequences:

>Translated_299_residues
MTATLPSRQDAAARPADDDAPFVLPRWYWARKHPTLVIGAVLLLAVAALAIAAPWISPFDPQDIDPLARMQPPSAEHWFG
TDALGRDVFSRAVWGGRVSMIVALSVGLLSTVLGVSIGLTAGFVRWTDGFLMRVMDGLMAIPGILLAIALMALTQASLGA
VIVAITVPEVPRVVRLVRSMALTLREQLYVEAAHAVGTRLPVILLRHVLPNMVAPLIVQATFVAAAAVLTEAALSFLGVG
VPAQTPSWGNIMAEGRNFVAVAFHILLYPGLLLAATVLAINLLGDGLRDALDPRLARQL
>Mature_298_residues
TATLPSRQDAAARPADDDAPFVLPRWYWARKHPTLVIGAVLLLAVAALAIAAPWISPFDPQDIDPLARMQPPSAEHWFGT
DALGRDVFSRAVWGGRVSMIVALSVGLLSTVLGVSIGLTAGFVRWTDGFLMRVMDGLMAIPGILLAIALMALTQASLGAV
IVAITVPEVPRVVRLVRSMALTLREQLYVEAAHAVGTRLPVILLRHVLPNMVAPLIVQATFVAAAAVLTEAALSFLGVGV
PAQTPSWGNIMAEGRNFVAVAFHILLYPGLLLAATVLAINLLGDGLRDALDPRLARQL

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=39.1941391941392, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1787760, Length=293, Percent_Identity=37.2013651877133, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=39.568345323741, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=36.4372469635627, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787498, Length=257, Percent_Identity=33.4630350194552, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787549, Length=254, Percent_Identity=33.8582677165354, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=31.140350877193, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31785; Mature: 31654

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLPSRQDAAARPADDDAPFVLPRWYWARKHPTLVIGAVLLLAVAALAIAAPWISPFD
CCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PQDIDPLARMQPPSAEHWFGTDALGRDVFSRAVWGGRVSMIVALSVGLLSTVLGVSIGLT
CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGFVRWTDGFLMRVMDGLMAIPGILLAIALMALTQASLGAVIVAITVPEVPRVVRLVRSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHH
ALTLREQLYVEAAHAVGTRLPVILLRHVLPNMVAPLIVQATFVAAAAVLTEAALSFLGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPAQTPSWGNIMAEGRNFVAVAFHILLYPGLLLAATVLAINLLGDGLRDALDPRLARQL
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
TATLPSRQDAAARPADDDAPFVLPRWYWARKHPTLVIGAVLLLAVAALAIAAPWISPFD
CCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PQDIDPLARMQPPSAEHWFGTDALGRDVFSRAVWGGRVSMIVALSVGLLSTVLGVSIGLT
CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGFVRWTDGFLMRVMDGLMAIPGILLAIALMALTQASLGAVIVAITVPEVPRVVRLVRSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHH
ALTLREQLYVEAAHAVGTRLPVILLRHVLPNMVAPLIVQATFVAAAAVLTEAALSFLGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPAQTPSWGNIMAEGRNFVAVAFHILLYPGLLLAATVLAINLLGDGLRDALDPRLARQL
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]