Click here to switch to the map view.

The map label for this gene is 94313972

Identifier: 94313972

GI number: 94313972

Start: 1738518

End: 1740620

Strand: Reverse

Name: 94313972

Synonym: Rmet_5050

Alternate gene names: NA

Gene position: 1740620-1738518 (Counterclockwise)

Preceding gene: 94313973

Following gene: 94313971

Centisome position: 67.46

GC content: 65.57

Gene sequence:

>2103_bases
ATGAAGCTCACGCCCATTGCGCTTTGCATCGCGGTGCTTGCCTTGTCGGCATGCGGTGGTGGTGGTGGCGATTCTTCAAC
GGGGGGGACCACGACCACGACCACGCCACCGGGCACCACCGCGCCCACCAAGCAGGTCGTCAGCGGCGTTGCGGCGACCG
GCGCGGCGATGCAAGGCGCCACGGTGACGCTGACGGACGCCGCGGGCAAGTCGGCAAGCTGCCCGGCCGACGCCACCACT
GGCTCGTTCCAGTGCGATGTGACCGGCCTGACCGCACCGTTCGTGCTGGCCGCCATGGGCAACGTAGCCGACTCGCAGGC
CACGCTGATCAGCCTGAGCGCCACGGCTGGCACCCAGACGATCAACATCACGCCGCTCACCAACGCGATTGCGGCGACGA
TCATCGGCGACAACCCGACCAAGTTGCTGGCCGATACCAGTCTCCTGCAGTCCAAGGTCACGGCATCGTCGATCAGCACC
ACGGTGAAGGCGTACTCGGATGCGCTGGCCGCTCTGCTGGCCGCCACCGGCAACACCGGCGTGGATCTGATCTCCGGTCC
GCTGACGGCCGGTGCGCCCGGGCTGGACCGTCTGCTCGATCAGGTGAAGGTCAACGTGCTCCCCAATGGCGGCGTGCAAC
TGACATCGGTGGCGGGCGCCTCGAGCGATACGCCGACGATGCTCCAGCTTGCGCCCGGTGTTGCTCCGACGGCGGCTGAC
ACGGCAAGCCTGCCAAGCGTGGCCACGATTGGCGGCGCACCGGTTTCGAGCCTGCCCAGCGCCAGCGATCTTGCCGGGCT
GCAGGCGGGGTTTAACCAGTGCTTCGCGGCGTCGACGACAGCTTCTGCCCGGTTGAGCGGAAGCGTGGCCGCCTGTGCGC
AGATCATCGTCGACGATGTCACGCCGGGCGCGCTGATGGCGGGTGTGCCCAGCAGCTACCTTAGCAACGGCGCGAATGCC
GAGCAGGACCTGGGCTCCAGTATCGTTGGGGACGACGGCATGACTGGCGCTGTCTTCAGCTTGCCGGAGATCATCCGGGT
CCAGGCGGCCGACAAGGTCTGGATCAAGGTGTCCTGGACACGTGCCGACGGCATCCGCGATGGCATGCAGCAGATCGCGC
AGATCGCGTTGCAGCCGTCGGCTCGGACGACCAGCGACAATGGCTGGCGTCTGGTCGGCAACCAGCGTCACGTGCTGAGC
AAGGTCACCGGCAATGCGCAGCGCTGGGACTGGTTGAACACCGTCAAGGCGACCACCGGCACCAATGCCTTCGTCAGTTC
GCTGAGTTTGCAGGTAGGTATCACGGACGACCAGAATGTACCCGTCGATTTTGCCGTGGTGACAGGCCCGGGGCTGCGTG
AAGGGGTGCTGCTCAAGCCGAGCACCGGTGCGTGCGATACGCTCAATATCCACGCGCAGCTTGCGCCGGGTGACATGCAA
GGTGTGGACGCCAGCGCGATTCCGGGCAAGTATTCGAGCAAGCTGAACAGCTGCCGCAACAGCTACCGTCTGGCCGGCGT
TGCCCAGGATCCGGCCGCCCAGGCGCAGTTCAAATGGCCGGGCAGCAACGCCGCGTTTTCGAATCCGCAGTTGAGCGCCA
CGGAACTCGCGAACGTGGTGCCGTTCGGTGTCTACACCTTCGCGATCTACCAGAAAGGCAATGCGGCGGCGCCGGCCTAC
ACCTACGCGGTGCGTTTGCGCACACCGCCGCCGTCGCCGGATACGCTGCGCCAGTATGCGTGGCAGGACGTCAGCAAGAC
CGCGCGTGATGCCCTGACGCCCGGCTCGGGATCGGAGTTCGCTGGCGGGGCAACATTCCCGATGAGCTGGACCTCTGCAT
CGGGTGTGCCGTTCGTGAAAAAGACCAACGTGCAGATTCGATCAACCATCGGTGGCGCCCCGCAGGTATTCGTAAGCGGC
AATGCGCGTGCCAAGCCGGCGGCCGCGAATACGGTGGTCAACGTGTTGGTGCCGGGCGATCAGGGGGCCGCGTTTCCGGC
GGTTGCCGGGGCGACTGGCACGAGCGATATGTCGTTCGCGAACCTTAGCTGGTCTGACACGTTCGATCTGAGTTTCAGTA
CCAGCGTGGAGTACGACCACTAA

Upstream 100 bases:

>100_bases
CACGAGCACCATCGGCCCGAACTCGAAGGCCACGGGGATCTGCGTGCTCTGAGTCGGATCGAGAGTGTTTTTTCAATACA
GACAGCACGGAAGGGGAAAT

Downstream 100 bases:

>100_bases
GTACGACCACTAAGTACGACCACTAAGTACGACCACCAGGCCGATCCCGGCGCGCCAGTCGCCGGCCAAGGACCCCGCGT
CTCGCAGTCGAGGCGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MKLTPIALCIAVLALSACGGGGGDSSTGGTTTTTTPPGTTAPTKQVVSGVAATGAAMQGATVTLTDAAGKSASCPADATT
GSFQCDVTGLTAPFVLAAMGNVADSQATLISLSATAGTQTINITPLTNAIAATIIGDNPTKLLADTSLLQSKVTASSIST
TVKAYSDALAALLAATGNTGVDLISGPLTAGAPGLDRLLDQVKVNVLPNGGVQLTSVAGASSDTPTMLQLAPGVAPTAAD
TASLPSVATIGGAPVSSLPSASDLAGLQAGFNQCFAASTTASARLSGSVAACAQIIVDDVTPGALMAGVPSSYLSNGANA
EQDLGSSIVGDDGMTGAVFSLPEIIRVQAADKVWIKVSWTRADGIRDGMQQIAQIALQPSARTTSDNGWRLVGNQRHVLS
KVTGNAQRWDWLNTVKATTGTNAFVSSLSLQVGITDDQNVPVDFAVVTGPGLREGVLLKPSTGACDTLNIHAQLAPGDMQ
GVDASAIPGKYSSKLNSCRNSYRLAGVAQDPAAQAQFKWPGSNAAFSNPQLSATELANVVPFGVYTFAIYQKGNAAAPAY
TYAVRLRTPPPSPDTLRQYAWQDVSKTARDALTPGSGSEFAGGATFPMSWTSASGVPFVKKTNVQIRSTIGGAPQVFVSG
NARAKPAAANTVVNVLVPGDQGAAFPAVAGATGTSDMSFANLSWSDTFDLSFSTSVEYDH

Sequences:

>Translated_700_residues
MKLTPIALCIAVLALSACGGGGGDSSTGGTTTTTTPPGTTAPTKQVVSGVAATGAAMQGATVTLTDAAGKSASCPADATT
GSFQCDVTGLTAPFVLAAMGNVADSQATLISLSATAGTQTINITPLTNAIAATIIGDNPTKLLADTSLLQSKVTASSIST
TVKAYSDALAALLAATGNTGVDLISGPLTAGAPGLDRLLDQVKVNVLPNGGVQLTSVAGASSDTPTMLQLAPGVAPTAAD
TASLPSVATIGGAPVSSLPSASDLAGLQAGFNQCFAASTTASARLSGSVAACAQIIVDDVTPGALMAGVPSSYLSNGANA
EQDLGSSIVGDDGMTGAVFSLPEIIRVQAADKVWIKVSWTRADGIRDGMQQIAQIALQPSARTTSDNGWRLVGNQRHVLS
KVTGNAQRWDWLNTVKATTGTNAFVSSLSLQVGITDDQNVPVDFAVVTGPGLREGVLLKPSTGACDTLNIHAQLAPGDMQ
GVDASAIPGKYSSKLNSCRNSYRLAGVAQDPAAQAQFKWPGSNAAFSNPQLSATELANVVPFGVYTFAIYQKGNAAAPAY
TYAVRLRTPPPSPDTLRQYAWQDVSKTARDALTPGSGSEFAGGATFPMSWTSASGVPFVKKTNVQIRSTIGGAPQVFVSG
NARAKPAAANTVVNVLVPGDQGAAFPAVAGATGTSDMSFANLSWSDTFDLSFSTSVEYDH
>Mature_700_residues
MKLTPIALCIAVLALSACGGGGGDSSTGGTTTTTTPPGTTAPTKQVVSGVAATGAAMQGATVTLTDAAGKSASCPADATT
GSFQCDVTGLTAPFVLAAMGNVADSQATLISLSATAGTQTINITPLTNAIAATIIGDNPTKLLADTSLLQSKVTASSIST
TVKAYSDALAALLAATGNTGVDLISGPLTAGAPGLDRLLDQVKVNVLPNGGVQLTSVAGASSDTPTMLQLAPGVAPTAAD
TASLPSVATIGGAPVSSLPSASDLAGLQAGFNQCFAASTTASARLSGSVAACAQIIVDDVTPGALMAGVPSSYLSNGANA
EQDLGSSIVGDDGMTGAVFSLPEIIRVQAADKVWIKVSWTRADGIRDGMQQIAQIALQPSARTTSDNGWRLVGNQRHVLS
KVTGNAQRWDWLNTVKATTGTNAFVSSLSLQVGITDDQNVPVDFAVVTGPGLREGVLLKPSTGACDTLNIHAQLAPGDMQ
GVDASAIPGKYSSKLNSCRNSYRLAGVAQDPAAQAQFKWPGSNAAFSNPQLSATELANVVPFGVYTFAIYQKGNAAAPAY
TYAVRLRTPPPSPDTLRQYAWQDVSKTARDALTPGSGSEFAGGATFPMSWTSASGVPFVKKTNVQIRSTIGGAPQVFVSG
NARAKPAAANTVVNVLVPGDQGAAFPAVAGATGTSDMSFANLSWSDTFDLSFSTSVEYDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70555; Mature: 70555

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTPIALCIAVLALSACGGGGGDSSTGGTTTTTTPPGTTAPTKQVVSGVAATGAAMQGA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHCCCC
TVTLTDAAGKSASCPADATTGSFQCDVTGLTAPFVLAAMGNVADSQATLISLSATAGTQT
EEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCEE
INITPLTNAIAATIIGDNPTKLLADTSLLQSKVTASSISTTVKAYSDALAALLAATGNTG
EEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDLISGPLTAGAPGLDRLLDQVKVNVLPNGGVQLTSVAGASSDTPTMLQLAPGVAPTAAD
CEEECCCCCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCC
TASLPSVATIGGAPVSSLPSASDLAGLQAGFNQCFAASTTASARLSGSVAACAQIIVDDV
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCC
TPGALMAGVPSSYLSNGANAEQDLGSSIVGDDGMTGAVFSLPEIIRVQAADKVWIKVSWT
CCCHHHHCCCHHHHCCCCCCHHHHCCCCCCCCCCCCHHHCCCHHHEEECCCEEEEEEEEE
RADGIRDGMQQIAQIALQPSARTTSDNGWRLVGNQRHVLSKVTGNAQRWDWLNTVKATTG
ECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHCCCCHHCCHHHHHCCCCC
TNAFVSSLSLQVGITDDQNVPVDFAVVTGPGLREGVLLKPSTGACDTLNIHAQLAPGDMQ
CHHHHEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCCC
GVDASAIPGKYSSKLNSCRNSYRLAGVAQDPAAQAQFKWPGSNAAFSNPQLSATELANVV
CCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHC
PFGVYTFAIYQKGNAAAPAYTYAVRLRTPPPSPDTLRQYAWQDVSKTARDALTPGSGSEF
CCCEEEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AGGATFPMSWTSASGVPFVKKTNVQIRSTIGGAPQVFVSGNARAKPAAANTVVNVLVPGD
CCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEECC
QGAAFPAVAGATGTSDMSFANLSWSDTFDLSFSTSVEYDH
CCCCCCEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKLTPIALCIAVLALSACGGGGGDSSTGGTTTTTTPPGTTAPTKQVVSGVAATGAAMQGA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHCCCC
TVTLTDAAGKSASCPADATTGSFQCDVTGLTAPFVLAAMGNVADSQATLISLSATAGTQT
EEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCEE
INITPLTNAIAATIIGDNPTKLLADTSLLQSKVTASSISTTVKAYSDALAALLAATGNTG
EEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDLISGPLTAGAPGLDRLLDQVKVNVLPNGGVQLTSVAGASSDTPTMLQLAPGVAPTAAD
CEEECCCCCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCC
TASLPSVATIGGAPVSSLPSASDLAGLQAGFNQCFAASTTASARLSGSVAACAQIIVDDV
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCC
TPGALMAGVPSSYLSNGANAEQDLGSSIVGDDGMTGAVFSLPEIIRVQAADKVWIKVSWT
CCCHHHHCCCHHHHCCCCCCHHHHCCCCCCCCCCCCHHHCCCHHHEEECCCEEEEEEEEE
RADGIRDGMQQIAQIALQPSARTTSDNGWRLVGNQRHVLSKVTGNAQRWDWLNTVKATTG
ECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHCCCCHHCCHHHHHCCCCC
TNAFVSSLSLQVGITDDQNVPVDFAVVTGPGLREGVLLKPSTGACDTLNIHAQLAPGDMQ
CHHHHEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCCC
GVDASAIPGKYSSKLNSCRNSYRLAGVAQDPAAQAQFKWPGSNAAFSNPQLSATELANVV
CCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHC
PFGVYTFAIYQKGNAAAPAYTYAVRLRTPPPSPDTLRQYAWQDVSKTARDALTPGSGSEF
CCCEEEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AGGATFPMSWTSASGVPFVKKTNVQIRSTIGGAPQVFVSGNARAKPAAANTVVNVLVPGD
CCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEECC
QGAAFPAVAGATGTSDMSFANLSWSDTFDLSFSTSVEYDH
CCCCCCEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA