| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is cusC
Identifier: 94313953
GI number: 94313953
Start: 1716485
End: 1717786
Strand: Direct
Name: cusC
Synonym: Rmet_5031
Alternate gene names: NA
Gene position: 1716485-1717786 (Clockwise)
Preceding gene: 94313952
Following gene: 94313954
Centisome position: 66.53
GC content: 67.28
Gene sequence:
>1302_bases ATGTCATTCCCGCTTCGCCTGAGGCTGGCGCTGCTTTGCGCGTCCGCCCTCGGCATGTCGGTGTCGCACGCCGCGTCACC ACACGCCGTCCCTTCCCTGTCGCTTGAAGAGGCCGCTGCTCTCGCCACGACACATGCGCACGACGCAGAAAACACGCGTG GGGCCGTAGAGGCTGCCGTGCAGATGGCCGTGGCGGCCGGGCAGTTGCCCGATCCCGTCCTGAAGGTTGGACTGAATAAT GTCCCGACCGATGGCCCCGACAAGTTCTCGCTGACCCGCGAAAGCATGACCATGCGGTCGGTCAGCGTGATGCAGGAGTT CACGCGCTCGGACAAACGCCGGGCCCGTGCGGCACGCTTCGAGGCCGAGGCCGCCTCGGCCGACGCCCAACGCATGGTCG GCATGACCAATGTCCAGCGCAGCGCCGTGGCCGCATGGATCGACCGCTGGTACGCCGAACGGGCCGCGGCACTCCTTGCC AGTCACGAGCAACCCCTGAGCCTGACGCTGGAAGCGGCCAACGCCGCCTACCGCAGCGGCCGCGGCACCCGCGCCGACGT GTTGTCCGCGCAATTCGAAGTGCAGAAGCTGCGCGACCGCGAGAACGAAAACCAGGCGGCTCTCGACACCGCCAACGTGA ATCTCACCCGCTGGATCGGCACCGATGCGAGCCGCCCCCTGGGCGATCCCCCCGCGCTGACAGTTCCGGATCGCGTCGCG CAACTTGCCCGGAGCCATTTCGACGGTGTCCCCGAGGTTGCCGCGGCGCAGCGCGACGTCGCGCTCGCGGAGTCCGAGAT CCGCGTGGCGGACGAGGCCCGCAAGCCTGACGTCTCCCTGGAACTGATGTACAGCCAGCGCGGCTCGGCCTATTCAAACC TCGCCTCGATCAATGTGAGCATCCCCTTGCCCTGGGATCGCGCCAACCGGCAGGACCGCGAAGTCGCTGCCCGGCTCGCG CAGGCCACGGCGGCACGTGCGAAAGCGGAGATGATCCGGCGCGACACCGATGCCGTGGTCGGCGCCAGGCTCGCCGAGTT GCGCCGCAACCTGGAACGCCTGAAACGCTACGACGACGCCACGCTGCCGCTTACCAATGCCCAGGCGGAGGCCGCGTTGA CGGCCTATCGCGCCAATGCCGGGTCTCTGCAGGCTGTGGCCGATGCCAATCATCGTGTCATCGATACCTCGCTGGAGCGG CTATCGCTGGAACAACGCACGACCCGACTCTGGGCCGAACTCACCTTCCTGACACCGTTGCCTACCGCACAAACCGAACC CGCCAACAAGGATCTTCCATGA
Upstream 100 bases:
>100_bases CATTCTTCACTGCTGTTTCCGTACGTAGCCTCCGAAGCAACGCCAATTCCGTTCCGCCCCCGAAACCTCGGGCGCGGTGG CCGTTGTTTCCGGAGGCTTT
Downstream 100 bases:
>100_bases ACGCACGACTGACCATCACGGCGACTTGCCTGGTCCTGATTGGCGTGGCCGGCTACAGCGGGTATCACCTTGGCGCATTG CACACCATGCCGGCAACGTC
Product: heavy metal cation tricomponent efflux outer membrane porin CusC
Products: NA
Alternate protein names: CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Outer Membrane Protein; Outer Membrane Cation Efflux Protein; Cation Efflux Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; Cobalt-Zinc-Cadmium Resistance Outer Membrane Porin; Copper/Silver Resistance Outer Membrane Protein; Heavy Metal RND Efflux CzcC Family; Cation Resistance Protein CzcC; Efflux System Outer Membrane Protein; Outer Membrane Silver Efflux Protein; Outer Membrane Heavy Metal Efflux Protein; Outer Membrane Cation Efflux System Protein CzcC
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSFPLRLRLALLCASALGMSVSHAASPHAVPSLSLEEAAALATTHAHDAENTRGAVEAAVQMAVAAGQLPDPVLKVGLNN VPTDGPDKFSLTRESMTMRSVSVMQEFTRSDKRRARAARFEAEAASADAQRMVGMTNVQRSAVAAWIDRWYAERAAALLA SHEQPLSLTLEAANAAYRSGRGTRADVLSAQFEVQKLRDRENENQAALDTANVNLTRWIGTDASRPLGDPPALTVPDRVA QLARSHFDGVPEVAAAQRDVALAESEIRVADEARKPDVSLELMYSQRGSAYSNLASINVSIPLPWDRANRQDREVAARLA QATAARAKAEMIRRDTDAVVGARLAELRRNLERLKRYDDATLPLTNAQAEAALTAYRANAGSLQAVADANHRVIDTSLER LSLEQRTTRLWAELTFLTPLPTAQTEPANKDLP
Sequences:
>Translated_433_residues MSFPLRLRLALLCASALGMSVSHAASPHAVPSLSLEEAAALATTHAHDAENTRGAVEAAVQMAVAAGQLPDPVLKVGLNN VPTDGPDKFSLTRESMTMRSVSVMQEFTRSDKRRARAARFEAEAASADAQRMVGMTNVQRSAVAAWIDRWYAERAAALLA SHEQPLSLTLEAANAAYRSGRGTRADVLSAQFEVQKLRDRENENQAALDTANVNLTRWIGTDASRPLGDPPALTVPDRVA QLARSHFDGVPEVAAAQRDVALAESEIRVADEARKPDVSLELMYSQRGSAYSNLASINVSIPLPWDRANRQDREVAARLA QATAARAKAEMIRRDTDAVVGARLAELRRNLERLKRYDDATLPLTNAQAEAALTAYRANAGSLQAVADANHRVIDTSLER LSLEQRTTRLWAELTFLTPLPTAQTEPANKDLP >Mature_432_residues SFPLRLRLALLCASALGMSVSHAASPHAVPSLSLEEAAALATTHAHDAENTRGAVEAAVQMAVAAGQLPDPVLKVGLNNV PTDGPDKFSLTRESMTMRSVSVMQEFTRSDKRRARAARFEAEAASADAQRMVGMTNVQRSAVAAWIDRWYAERAAALLAS HEQPLSLTLEAANAAYRSGRGTRADVLSAQFEVQKLRDRENENQAALDTANVNLTRWIGTDASRPLGDPPALTVPDRVAQ LARSHFDGVPEVAAAQRDVALAESEIRVADEARKPDVSLELMYSQRGSAYSNLASINVSIPLPWDRANRQDREVAARLAQ ATAARAKAEMIRRDTDAVVGARLAELRRNLERLKRYDDATLPLTNAQAEAALTAYRANAGSLQAVADANHRVIDTSLERL SLEQRTTRLWAELTFLTPLPTAQTEPANKDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46978; Mature: 46847
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPLRLRLALLCASALGMSVSHAASPHAVPSLSLEEAAALATTHAHDAENTRGAVEAAV CCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH QMAVAAGQLPDPVLKVGLNNVPTDGPDKFSLTRESMTMRSVSVMQEFTRSDKRRARAARF HHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEAASADAQRMVGMTNVQRSAVAAWIDRWYAERAAALLASHEQPLSLTLEAANAAYRSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCC RGTRADVLSAQFEVQKLRDRENENQAALDTANVNLTRWIGTDASRPLGDPPALTVPDRVA CCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHH QLARSHFDGVPEVAAAQRDVALAESEIRVADEARKPDVSLELMYSQRGSAYSNLASINVS HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCEEEEEEE IPLPWDRANRQDREVAARLAQATAARAKAEMIRRDTDAVVGARLAELRRNLERLKRYDDA ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLPLTNAQAEAALTAYRANAGSLQAVADANHRVIDTSLERLSLEQRTTRLWAELTFLTPL CCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCC PTAQTEPANKDLP CCCCCCCCCCCCC >Mature Secondary Structure SFPLRLRLALLCASALGMSVSHAASPHAVPSLSLEEAAALATTHAHDAENTRGAVEAAV CCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH QMAVAAGQLPDPVLKVGLNNVPTDGPDKFSLTRESMTMRSVSVMQEFTRSDKRRARAARF HHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEAASADAQRMVGMTNVQRSAVAAWIDRWYAERAAALLASHEQPLSLTLEAANAAYRSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCC RGTRADVLSAQFEVQKLRDRENENQAALDTANVNLTRWIGTDASRPLGDPPALTVPDRVA CCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHH QLARSHFDGVPEVAAAQRDVALAESEIRVADEARKPDVSLELMYSQRGSAYSNLASINVS HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCEEEEEEE IPLPWDRANRQDREVAARLAQATAARAKAEMIRRDTDAVVGARLAELRRNLERLKRYDDA ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLPLTNAQAEAALTAYRANAGSLQAVADANHRVIDTSLERLSLEQRTTRLWAELTFLTPL CCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCC PTAQTEPANKDLP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA