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The map label for this gene is 94313913

Identifier: 94313913

GI number: 94313913

Start: 1669001

End: 1670182

Strand: Reverse

Name: 94313913

Synonym: Rmet_4991

Alternate gene names: NA

Gene position: 1670182-1669001 (Counterclockwise)

Preceding gene: 94313914

Following gene: 94313907

Centisome position: 64.73

GC content: 63.96

Gene sequence:

>1182_bases
ATGCAGCGGAAGTATCTTGCAGTGGCAATCCTATGCACCGGCGCCAGTGTCGGGCATGCCCAGTCGACCGTGACGCTCTA
CGGCGTCGTCGATGCGAACCTTGAATTCGCCAACCATCTCGGCGCCGTGCCGGTTGCCGCGAATGGTTTCAACCCTGGCC
CGTCGAACAACGTTTTCCGCATGGATTCCGGCGGCGTGTCCGGTTCGCGCTGGGGTCTGCGCGGCTCGGAAGGGCTGGGC
GGCGGCCTCAAGGCCGTCTTCGTGCTGGAGAGCGGCTTCAACCTCGATACCGGCACCTCGCAGCAGAGCGGCCGCCTGTT
TGGCCGGCAGGCGTTCGTGGGCTTGCAGAGCGATTATGGCCAGCTTTCGCTGGGCCGGCAGTACACGTCCATGTTCGAAG
CGCTGGCGAACTTCGCGCCAGCCGCGTATGCGACGCAATACGAACCCGTCGTGGTCATGGCGGGCGCGAATTTCCGTGAG
GACAACACGATCAAGTACACCGGCAGCTTCGGGCCGATCACGGCGCTGGGGCATTTTTCGTTCGGTACGGGCCTGGCCTT
GCCGCCCACCGTGGGCGCCCCGTTCATCCTCGGCGGCAACGGCGAAGTACCGGGCCAGTTCCGGCGTGATACGGCCTATG
GCGCGGCACTGGTATATGCCACCGGACCACTTGGCGTGGTGGTGGGCTACGACCAGTTCAATCCGACCATCGCGCCCACC
GCGCAGCCGACCAACGCGGGCACCGGCACCTTCAAGAAGGCCTCGGTCGGCGCCAGCTACGCGATCGGGCCGGCGAAGAT
CATGGCGGGATACCGGTGGGGCCAGAACAAGAACCAGCAGGGGGCCGAGTTCCTGCGCGATGACTTCTACTGGATCGGCG
GGACATACCAGATCACGACGGCCATCGGGCTGACGCTCGAGTACAACTACGACAACGTCAAGAACCAGTTCGGCGATGCG
CACCTGGCCAACCCGTGGCAGATCTCGGCTATCTCCAACTATGCGTTCTCCAAGCGGACCGACGTCTACGTGACGGCGGC
CTACACCAAGAACGCCGGTCTGGCGATGGAGTCCGCCGCGATCTTCTATGCCAACAGCCTGTCGCTTGGCAACAGCTATG
CCCTGGCCAACGGACAGAGCTCAATGTTCGGCATTGCGGTGGGGCTGCGTCACAAGTTCTGA

Upstream 100 bases:

>100_bases
GAAGATTGTCTGGAGAGATGCCATCCTGGCTGGGAGCGCCATCGGTGGAGGGGGCGTTTGCTGTCCGGATAAAGAAGAAC
AACAAGCGGAGGGGCTCAAG

Downstream 100 bases:

>100_bases
GCGGGTGGCGGGTCCGACAGGCAGCCGGTCCAGGCGCATCAGGGGCAGGAAGAGGATTGCCGCCCCACTTGCCAGCCCGG
CGAGATGGGCGGCGGCCAGC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQRKYLAVAILCTGASVGHAQSTVTLYGVVDANLEFANHLGAVPVAANGFNPGPSNNVFRMDSGGVSGSRWGLRGSEGLG
GGLKAVFVLESGFNLDTGTSQQSGRLFGRQAFVGLQSDYGQLSLGRQYTSMFEALANFAPAAYATQYEPVVVMAGANFRE
DNTIKYTGSFGPITALGHFSFGTGLALPPTVGAPFILGGNGEVPGQFRRDTAYGAALVYATGPLGVVVGYDQFNPTIAPT
AQPTNAGTGTFKKASVGASYAIGPAKIMAGYRWGQNKNQQGAEFLRDDFYWIGGTYQITTAIGLTLEYNYDNVKNQFGDA
HLANPWQISAISNYAFSKRTDVYVTAAYTKNAGLAMESAAIFYANSLSLGNSYALANGQSSMFGIAVGLRHKF

Sequences:

>Translated_393_residues
MQRKYLAVAILCTGASVGHAQSTVTLYGVVDANLEFANHLGAVPVAANGFNPGPSNNVFRMDSGGVSGSRWGLRGSEGLG
GGLKAVFVLESGFNLDTGTSQQSGRLFGRQAFVGLQSDYGQLSLGRQYTSMFEALANFAPAAYATQYEPVVVMAGANFRE
DNTIKYTGSFGPITALGHFSFGTGLALPPTVGAPFILGGNGEVPGQFRRDTAYGAALVYATGPLGVVVGYDQFNPTIAPT
AQPTNAGTGTFKKASVGASYAIGPAKIMAGYRWGQNKNQQGAEFLRDDFYWIGGTYQITTAIGLTLEYNYDNVKNQFGDA
HLANPWQISAISNYAFSKRTDVYVTAAYTKNAGLAMESAAIFYANSLSLGNSYALANGQSSMFGIAVGLRHKF
>Mature_393_residues
MQRKYLAVAILCTGASVGHAQSTVTLYGVVDANLEFANHLGAVPVAANGFNPGPSNNVFRMDSGGVSGSRWGLRGSEGLG
GGLKAVFVLESGFNLDTGTSQQSGRLFGRQAFVGLQSDYGQLSLGRQYTSMFEALANFAPAAYATQYEPVVVMAGANFRE
DNTIKYTGSFGPITALGHFSFGTGLALPPTVGAPFILGGNGEVPGQFRRDTAYGAALVYATGPLGVVVGYDQFNPTIAPT
AQPTNAGTGTFKKASVGASYAIGPAKIMAGYRWGQNKNQQGAEFLRDDFYWIGGTYQITTAIGLTLEYNYDNVKNQFGDA
HLANPWQISAISNYAFSKRTDVYVTAAYTKNAGLAMESAAIFYANSLSLGNSYALANGQSSMFGIAVGLRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41452; Mature: 41452

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKYLAVAILCTGASVGHAQSTVTLYGVVDANLEFANHLGAVPVAANGFNPGPSNNVFR
CCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEE
MDSGGVSGSRWGLRGSEGLGGGLKAVFVLESGFNLDTGTSQQSGRLFGRQAFVGLQSDYG
ECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECEEEEEEECCCCC
QLSLGRQYTSMFEALANFAPAAYATQYEPVVVMAGANFREDNTIKYTGSFGPITALGHFS
CEECCHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCC
FGTGLALPPTVGAPFILGGNGEVPGQFRRDTAYGAALVYATGPLGVVVGYDQFNPTIAPT
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEECCC
AQPTNAGTGTFKKASVGASYAIGPAKIMAGYRWGQNKNQQGAEFLRDDFYWIGGTYQITT
CCCCCCCCCCEEECCCCCCEECCHHHHEECEECCCCCCCHHHHHHHCCEEEECCEEEEEE
AIGLTLEYNYDNVKNQFGDAHLANPWQISAISNYAFSKRTDVYVTAAYTKNAGLAMESAA
EEEEEEEECCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEECEE
IFYANSLSLGNSYALANGQSSMFGIAVGLRHKF
EEEEEEECCCCEEEEECCCCCEEEEEEEEECCC
>Mature Secondary Structure
MQRKYLAVAILCTGASVGHAQSTVTLYGVVDANLEFANHLGAVPVAANGFNPGPSNNVFR
CCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEE
MDSGGVSGSRWGLRGSEGLGGGLKAVFVLESGFNLDTGTSQQSGRLFGRQAFVGLQSDYG
ECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECEEEEEEECCCCC
QLSLGRQYTSMFEALANFAPAAYATQYEPVVVMAGANFREDNTIKYTGSFGPITALGHFS
CEECCHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCC
FGTGLALPPTVGAPFILGGNGEVPGQFRRDTAYGAALVYATGPLGVVVGYDQFNPTIAPT
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEECCC
AQPTNAGTGTFKKASVGASYAIGPAKIMAGYRWGQNKNQQGAEFLRDDFYWIGGTYQITT
CCCCCCCCCCEEECCCCCCEECCHHHHEECEECCCCCCCHHHHHHHCCEEEECCEEEEEE
AIGLTLEYNYDNVKNQFGDAHLANPWQISAISNYAFSKRTDVYVTAAYTKNAGLAMESAA
EEEEEEEECCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEECEE
IFYANSLSLGNSYALANGQSSMFGIAVGLRHKF
EEEEEEECCCCEEEEECCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]