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The map label for this gene is 94313857

Identifier: 94313857

GI number: 94313857

Start: 1601064

End: 1601378

Strand: Direct

Name: 94313857

Synonym: Rmet_4935

Alternate gene names: NA

Gene position: 1601064-1601378 (Clockwise)

Preceding gene: 94313856

Following gene: 94313859

Centisome position: 62.05

GC content: 60.95

Gene sequence:

>315_bases
ATGCCGACCTACAAGCAGTTGCTAGCGGAAAAAGAAGCACTCGAAGCCAAGCTCAATGAAGTTCGTGCCAATGAAGTGGC
TGGCGTGATCGAGCAAATTCGCCAATTGATGGCCGATTATGATTTGACCGTCGAGGACATCGCACCCAAGCGCCGTCGCG
GTCGTCCGGCCAGCGGCGCCACCGTGGCACGCAAGACGTCGTCCCTGCCGCCGAAGTACCTTGACCCGAAAACCGGCAAA
ACCTGGTCAGGCCGTGGCCGCGCGCCGGCATGGCTCGGCAAGCGCCCCGAGCGCTTCCTGATCGAACAGGCGTAA

Upstream 100 bases:

>100_bases
TGACCCGTGCTTTTTCAGATATTTTTTGTAATATTTTTGTTGTGCGGGTGCGTTGCGATGTCCTGTAACATTCCGCCACA
AATCTATCGGGGATCCAAAA

Downstream 100 bases:

>100_bases
GAGAGTTCAGCGGGCAGTCCGGCAAACGCCGGGCTGCCGCACGAGGCGCGCCGCTCAGCGCGCCTCGCAAAGATATTCGC
TACGCAACGCCCGGAATCCG

Product: putative H-NS histon-like DNA-binding protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; H-NS Histone-Like Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns; H-NS-Like Protein; H-NS-Like Proteins; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS-Like Transcription Regulator

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPTYKQLLAEKEALEAKLNEVRANEVAGVIEQIRQLMADYDLTVEDIAPKRRRGRPASGATVARKTSSLPPKYLDPKTGK
TWSGRGRAPAWLGKRPERFLIEQA

Sequences:

>Translated_104_residues
MPTYKQLLAEKEALEAKLNEVRANEVAGVIEQIRQLMADYDLTVEDIAPKRRRGRPASGATVARKTSSLPPKYLDPKTGK
TWSGRGRAPAWLGKRPERFLIEQA
>Mature_103_residues
PTYKQLLAEKEALEAKLNEVRANEVAGVIEQIRQLMADYDLTVEDIAPKRRRGRPASGATVARKTSSLPPKYLDPKTGKT
WSGRGRAPAWLGKRPERFLIEQA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11660; Mature: 11528

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYKQLLAEKEALEAKLNEVRANEVAGVIEQIRQLMADYDLTVEDIAPKRRRGRPASGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCC
TVARKTSSLPPKYLDPKTGKTWSGRGRAPAWLGKRPERFLIEQA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
PTYKQLLAEKEALEAKLNEVRANEVAGVIEQIRQLMADYDLTVEDIAPKRRRGRPASGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCC
TVARKTSSLPPKYLDPKTGKTWSGRGRAPAWLGKRPERFLIEQA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA