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The map label for this gene is narP [H]

Identifier: 94313776

GI number: 94313776

Start: 1512366

End: 1513001

Strand: Direct

Name: narP [H]

Synonym: Rmet_4854

Alternate gene names: 94313776

Gene position: 1512366-1513001 (Clockwise)

Preceding gene: 94313775

Following gene: 94313777

Centisome position: 58.62

GC content: 64.62

Gene sequence:

>636_bases
ATGTCGCAAGCCCGGCTTCTGTTGATCGATGACCACACGCTGTTCCGCACCGGACTGAAGCTATTGCTGGCCGCCAGCCC
GAACGTCGCGTCGATCATGGAGGCGGGATCGGTCATGGAGGCCACCGAGGCGCATGGCGACAAGCCGGTCGATATCCTGT
TGCTGGATATCCAGATGCCTGGGCTGAATGGCATCGAGGGCATCAAGGTGCTCCGTCGGCATTTCTCCCGCGCCCCGATC
GTGATCGTCTCCGGCACGTCGGGCATCGACGCGATTCCCGACGAGGCACGCAAGGAAGTCGCTGGTTTCTTGCCGAAATC
CGCCGACCCGCGCGAGATCGAGGAAGCGATTGCCTGCTGCCTGGCGGGCGGCACGTACTTCCAGACCGAACAGCCCGGCG
ACCGCCTCCCCCACACCCGGGCCTACAAGCCCAGCCAGCTCACGCCGCGCCAGCTCGAGGTCCTGAACCAGCTCAATCTG
GGGCGTTCGAACAAGGTCATCGCCTATCACCTCGGCCTGTCGGAAAACACCGTACGCGTGCACGTGGCGGCGATTCTCGA
CCACCTCGGCGTGGTCAGCCGCGTGGAAGCCATTCTCGAAGCCCAGCGCCGCGGTCTGGTGCAGGCACAACGCTGA

Upstream 100 bases:

>100_bases
GCGGGGCAACGCCGGAAAGACAGCCGGGGGGTAAGCATCATGGACAAGCACGCTGGAATCGAGTCCAATCGTCCTTGTCT
GTCGCCCCCCGCACTTTCTC

Downstream 100 bases:

>100_bases
CGCACGCCCGGCATGTGGTCCTCCGTGCTGCCTCACTATGACGAGCCGCGCCTGCTTGCGGCGCAGATGGAGCTGATCGA
CCAGAGCTTCGGCATCGCGA

Product: putative LuxR family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSQARLLLIDDHTLFRTGLKLLLAASPNVASIMEAGSVMEATEAHGDKPVDILLLDIQMPGLNGIEGIKVLRRHFSRAPI
VIVSGTSGIDAIPDEARKEVAGFLPKSADPREIEEAIACCLAGGTYFQTEQPGDRLPHTRAYKPSQLTPRQLEVLNQLNL
GRSNKVIAYHLGLSENTVRVHVAAILDHLGVVSRVEAILEAQRRGLVQAQR

Sequences:

>Translated_211_residues
MSQARLLLIDDHTLFRTGLKLLLAASPNVASIMEAGSVMEATEAHGDKPVDILLLDIQMPGLNGIEGIKVLRRHFSRAPI
VIVSGTSGIDAIPDEARKEVAGFLPKSADPREIEEAIACCLAGGTYFQTEQPGDRLPHTRAYKPSQLTPRQLEVLNQLNL
GRSNKVIAYHLGLSENTVRVHVAAILDHLGVVSRVEAILEAQRRGLVQAQR
>Mature_210_residues
SQARLLLIDDHTLFRTGLKLLLAASPNVASIMEAGSVMEATEAHGDKPVDILLLDIQMPGLNGIEGIKVLRRHFSRAPIV
IVSGTSGIDAIPDEARKEVAGFLPKSADPREIEEAIACCLAGGTYFQTEQPGDRLPHTRAYKPSQLTPRQLEVLNQLNLG
RSNKVIAYHLGLSENTVRVHVAAILDHLGVVSRVEAILEAQRRGLVQAQR

Specific function: This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=210, Percent_Identity=35.2380952380952, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787473, Length=200, Percent_Identity=33, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786747, Length=214, Percent_Identity=26.6355140186916, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790102, Length=190, Percent_Identity=33.1578947368421, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788222, Length=211, Percent_Identity=25.5924170616114, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790299, Length=131, Percent_Identity=29.0076335877863, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22947; Mature: 22816

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQARLLLIDDHTLFRTGLKLLLAASPNVASIMEAGSVMEATEAHGDKPVDILLLDIQMP
CCCCEEEEEECCHHHHHHHHEEHCCCCCHHHHHHHCCHHHHHHHCCCCCEEEEEEEEECC
GLNGIEGIKVLRRHFSRAPIVIVSGTSGIDAIPDEARKEVAGFLPKSADPREIEEAIACC
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
LAGGTYFQTEQPGDRLPHTRAYKPSQLTPRQLEVLNQLNLGRSNKVIAYHLGLSENTVRV
HCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEE
HVAAILDHLGVVSRVEAILEAQRRGLVQAQR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SQARLLLIDDHTLFRTGLKLLLAASPNVASIMEAGSVMEATEAHGDKPVDILLLDIQMP
CCCEEEEEECCHHHHHHHHEEHCCCCCHHHHHHHCCHHHHHHHCCCCCEEEEEEEEECC
GLNGIEGIKVLRRHFSRAPIVIVSGTSGIDAIPDEARKEVAGFLPKSADPREIEEAIACC
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
LAGGTYFQTEQPGDRLPHTRAYKPSQLTPRQLEVLNQLNLGRSNKVIAYHLGLSENTVRV
HCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEE
HVAAILDHLGVVSRVEAILEAQRRGLVQAQR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501030; 9278503 [H]