| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94313651
Identifier: 94313651
GI number: 94313651
Start: 1373214
End: 1373864
Strand: Direct
Name: 94313651
Synonym: Rmet_4729
Alternate gene names: NA
Gene position: 1373214-1373864 (Clockwise)
Preceding gene: 94313650
Following gene: 94313653
Centisome position: 53.22
GC content: 68.97
Gene sequence:
>651_bases ATGTCTGAACGCCTCATCATGCTGGACGTCCCCGGCGTCCTGTATTCGGACCGCTCCGCTACCCGCCTGGGCGGCACGCC AAACACGGGAACCCTGCGAGACGTCAGGTACTTCGACCCCATCGCCCTCGGCTACCTGCGCCGCCTGTTCGGCATTGCCG GCGCCCGCGTCGTGGTCTCGGACGCCTGGCGCCGTGGCACCCCGGCCGCCATCTTCCAGCAGCTGGATCTGCAGGTCGAA GGCATGACGCCGCCGGTGGCAGGCGGACACGGCGCGGAGATCGACGCCTGGTTCGCGCAACACCCGGCGCCGGGCGCATG GGTCATCATCTCGACCGCTGCCCCGGAGTCCCTGACCGACGAGCAGCGCGCACACCTGGTACAGGTGAATCCGGCCGAAG GTCTGACCGTCGACATCTTCCGCAAGGCGCTCGACATCCTCGGTGTGGCCTGCCCTTCCACCATCACGCCGGATTCGCGC GTCGACCCGGATCTCAAGGCCAAGCTGCGCCATCTGCAGCAACTGGCACGCGAGGCACCGGAGCGCTTCATGCCGGCGCC CGCCGCAGCCGAGGCCCGCGAGCGCGCCATGGCCATCGCGGTGGCCAGCCTGACTGGCAAGCAGCTCGAATCGGGTGCCA TTCACGCTTGA
Upstream 100 bases:
>100_bases TTGCACTTGAGCACAATTTGTGTAGCCCATCGCACCCTAAAGCCAGATACGCTTGATTCAACTTAACCGCTTAACTGCGA CTGACAAACACAGGAATCCC
Downstream 100 bases:
>100_bases TTCAGGGCTGATTCAGCACTGACGCTCAATCGGTCCCGCAGCAAGAGACAAAGGGCCGCAAGCAATTGCGGCCCTTTTTT CATTGGCTTTCAGCCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSERLIMLDVPGVLYSDRSATRLGGTPNTGTLRDVRYFDPIALGYLRRLFGIAGARVVVSDAWRRGTPAAIFQQLDLQVE GMTPPVAGGHGAEIDAWFAQHPAPGAWVIISTAAPESLTDEQRAHLVQVNPAEGLTVDIFRKALDILGVACPSTITPDSR VDPDLKAKLRHLQQLAREAPERFMPAPAAAEARERAMAIAVASLTGKQLESGAIHA
Sequences:
>Translated_216_residues MSERLIMLDVPGVLYSDRSATRLGGTPNTGTLRDVRYFDPIALGYLRRLFGIAGARVVVSDAWRRGTPAAIFQQLDLQVE GMTPPVAGGHGAEIDAWFAQHPAPGAWVIISTAAPESLTDEQRAHLVQVNPAEGLTVDIFRKALDILGVACPSTITPDSR VDPDLKAKLRHLQQLAREAPERFMPAPAAAEARERAMAIAVASLTGKQLESGAIHA >Mature_215_residues SERLIMLDVPGVLYSDRSATRLGGTPNTGTLRDVRYFDPIALGYLRRLFGIAGARVVVSDAWRRGTPAAIFQQLDLQVEG MTPPVAGGHGAEIDAWFAQHPAPGAWVIISTAAPESLTDEQRAHLVQVNPAEGLTVDIFRKALDILGVACPSTITPDSRV DPDLKAKLRHLQQLAREAPERFMPAPAAAEARERAMAIAVASLTGKQLESGAIHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23191; Mature: 23060
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLIMLDVPGVLYSDRSATRLGGTPNTGTLRDVRYFDPIALGYLRRLFGIAGARVVVS CCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCEEEE DAWRRGTPAAIFQQLDLQVEGMTPPVAGGHGAEIDAWFAQHPAPGAWVIISTAAPESLTD HHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCC EQRAHLVQVNPAEGLTVDIFRKALDILGVACPSTITPDSRVDPDLKAKLRHLQQLAREAP HHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ERFMPAPAAAEARERAMAIAVASLTGKQLESGAIHA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SERLIMLDVPGVLYSDRSATRLGGTPNTGTLRDVRYFDPIALGYLRRLFGIAGARVVVS CCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCEEEE DAWRRGTPAAIFQQLDLQVEGMTPPVAGGHGAEIDAWFAQHPAPGAWVIISTAAPESLTD HHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCC EQRAHLVQVNPAEGLTVDIFRKALDILGVACPSTITPDSRVDPDLKAKLRHLQQLAREAP HHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ERFMPAPAAAEARERAMAIAVASLTGKQLESGAIHA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA