| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is doxX
Identifier: 94313604
GI number: 94313604
Start: 1312604
End: 1313074
Strand: Reverse
Name: doxX
Synonym: Rmet_4682
Alternate gene names: NA
Gene position: 1313074-1312604 (Counterclockwise)
Preceding gene: 94313605
Following gene: 94313602
Centisome position: 50.89
GC content: 62.0
Gene sequence:
>471_bases ATGTCAAACGTATCTCATACCGATTCCCCAGTGCGGGCCGATACCACGCTCTGGTCGAACCTTACAACGCGGGCCTCGCG GCTGATCAGCGACTCGTTTCTGGCATTGCTGGCACGGCTGGCAATTGCCTCGGTGTTCTTCCTGTCGGGCCGCACCAAGG TCACCGGGCTGCTGACGATCAAGGACAGCACCTATTCGCTGTTCGAGCAGGAGTACAACTTGCCGCTGATCCCGCCCGAA CTCGCGGCCCATCTGGCCGCGTACGCCGAGCACCTGTTTCCGGTGCTGCTGGTGCTCGGCCTGTTCACGCGATTTTCGGC GTTCGCGCTGCTGGGGATGACGCTGGTCATCGAGATCTTTGTCTATCCCGATGCCTGGCCCACGCACCTGACCTGGGCCG CGTTGCAACTCTTCCTGATTGGCCGGGGTGCCGGCGCCTTTTCGCTCGACCGCCGATTCGGCATCAAGTAG
Upstream 100 bases:
>100_bases GACATCGCCCGCCTGCTGGCCACGCTGCTTGGCGCGCGGGTTTTCGCAGACATTCACGGCGCAGACATTCACTGAGCCTA TCCAGCTTGCCGAGGTAGCC
Downstream 100 bases:
>100_bases CCCTCAAGTGGACCTCAACCTGGCCCGAGAAACCTCTCGCGTCTTCTCCTTCCGCCCCGGCACGCTCGTTGGCCGGGGCA TTCTCCTTTCTGCATGGCGG
Product: thiosulfate:quinone oxidoreductase (TQO) small subunit(DoxD domain)
Products: NA
Alternate protein names: Transmembrane Protein; DoxX Subfamily; ThiosulphateQuinone Oxidoreductase; Integral Membrane Protein; DoxD Domain-Containing Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSNVSHTDSPVRADTTLWSNLTTRASRLISDSFLALLARLAIASVFFLSGRTKVTGLLTIKDSTYSLFEQEYNLPLIPPE LAAHLAAYAEHLFPVLLVLGLFTRFSAFALLGMTLVIEIFVYPDAWPTHLTWAALQLFLIGRGAGAFSLDRRFGIK
Sequences:
>Translated_156_residues MSNVSHTDSPVRADTTLWSNLTTRASRLISDSFLALLARLAIASVFFLSGRTKVTGLLTIKDSTYSLFEQEYNLPLIPPE LAAHLAAYAEHLFPVLLVLGLFTRFSAFALLGMTLVIEIFVYPDAWPTHLTWAALQLFLIGRGAGAFSLDRRFGIK >Mature_155_residues SNVSHTDSPVRADTTLWSNLTTRASRLISDSFLALLARLAIASVFFLSGRTKVTGLLTIKDSTYSLFEQEYNLPLIPPEL AAHLAAYAEHLFPVLLVLGLFTRFSAFALLGMTLVIEIFVYPDAWPTHLTWAALQLFLIGRGAGAFSLDRRFGIK
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17260; Mature: 17129
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVSHTDSPVRADTTLWSNLTTRASRLISDSFLALLARLAIASVFFLSGRTKVTGLLTI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE KDSTYSLFEQEYNLPLIPPELAAHLAAYAEHLFPVLLVLGLFTRFSAFALLGMTLVIEIF CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYPDAWPTHLTWAALQLFLIGRGAGAFSLDRRFGIK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCC >Mature Secondary Structure SNVSHTDSPVRADTTLWSNLTTRASRLISDSFLALLARLAIASVFFLSGRTKVTGLLTI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE KDSTYSLFEQEYNLPLIPPELAAHLAAYAEHLFPVLLVLGLFTRFSAFALLGMTLVIEIF CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYPDAWPTHLTWAALQLFLIGRGAGAFSLDRRFGIK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA