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The map label for this gene is atoE [H]

Identifier: 94313602

GI number: 94313602

Start: 1310882

End: 1312219

Strand: Reverse

Name: atoE [H]

Synonym: Rmet_4680

Alternate gene names: 94313602

Gene position: 1312219-1310882 (Counterclockwise)

Preceding gene: 94313604

Following gene: 94313601

Centisome position: 50.86

GC content: 62.71

Gene sequence:

>1338_bases
TTGAGTAAGGTCGCCGGGTTCTTTACTGAACTGATGCGCCGGTATTTGCCGGACCCCTTTGTATTCGCCATCGGCCTGAC
GTTGCTGACGATGGTCATGGCAATGCTGGTAGAAGGACAGGCCGCCCAGGCGGTCATCACGAACTGGGGCAAGGGGTTCT
GGAACCTGCTCTCGTTCACCACCCAGATGGCGGTGATTCTGGCGATGGGCTACGTGCTGGCCACCGCGCCGCTGGTCGAC
CGCTTCCTCAATGCCATCGTCGCCCGCGTGCAGACGCCGCGCGGCGCCATCATCGTGGCCACACTGGTCGGCGGTATCGG
CAGCTACCTGAACTGGGGCTTCGGCCTGGTGATCGGCGGCATCATCGCCCGCAAGCTGGCGCTGAAGGTCAAGGGCGTGC
ATTACCCCCTGATCATCGCCTCGGCCTACAGCGGCTTCACGATGTATGGCCTGGGCCTGTCTGCCAGCATCCCGGTACTG
ATCTCCACCCCGGGCCACCCGATGGAAAAGCTGATGGGCGTGATCGGTCTCAAGGAGACGATCTTCTCCACACCGATGCT
GCTGACGAGCCTTGCCGTCATCGTCACGCTGCCGCTGCTCAACGCGATGCTGCACCCGCGTGACGCCAAGGAAGTGGTGG
AAATCCGCGAGGAGAACAGCTCCGAGGACCGCGCCGCCGGGCACGGCCACAGCATGGGCATCGAGAACACGCTTGCCACG
CGCATGAACAACAGCCGCCTGCTGAGCCTGATCATCGGCCTGTGCGGGCTGGCCTACGCGGGTCTGCATTTCTCGCAGGG
TGGTTCGCTGGACCTGAACCTGATCAACTTCCTGATCCTGTTTATCGGCGTGCTGTTGCTGGGCACCCCGGCCAACTACG
TGGCCAAGCTGAACGAAGGCATCAAGACGATCTCCGGCATCATCCTGCAGTATCCGTTCTACGCAGGCATCATGGCGGTC
ATGGCCGGCTCCGGGCTGGTGGACAGCATCTCGCGCGTGTTCGTCGATATCGCCACGCCGCAGACGCTGCCGTTCTGGGG
TCTGGTCAGCTCGTTCGTGATCAACTTCTTCGCGCCGTCCGGCGGTGGCCACTGGGTGATCCAGGGTCCGTTCATGATCG
ACGCGGCCAAGGCCATCAACAGCTCGGTGGCGCAGACGTCGATGTCGGTCATGCTCGGCAACGCCTGGAATGACCTGGTG
CAGCCGTTCTGGATTCTGCCGGCGCTGGCGCTGTCGAAGCTGAAGCTCAAGGACGTGATGGGCTACACCGTGATCATGAT
GTTCTGGGTCGGCGCGATCTATATCGTCGCCATGCTGGCCTGGGGCGCGCAGATCTGA

Upstream 100 bases:

>100_bases
GCGCATTCGGACTCTTACGCTCCCGATCTTCATACAAGACGTTCGCATGTAGAACGCTAGTTCGATATGCGTTCATTTCG
GATTTCGTAGGAGACAGATC

Downstream 100 bases:

>100_bases
CAACCGATACAGGAGACATTCGATGCCGTACCTCATTGAGACCTTCGACAAGCCCGAACACCAGCACGTTCGCCAGGCCA
ACCGGCCCGCGCACCTGGAG

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSKVAGFFTELMRRYLPDPFVFAIGLTLLTMVMAMLVEGQAAQAVITNWGKGFWNLLSFTTQMAVILAMGYVLATAPLVD
RFLNAIVARVQTPRGAIIVATLVGGIGSYLNWGFGLVIGGIIARKLALKVKGVHYPLIIASAYSGFTMYGLGLSASIPVL
ISTPGHPMEKLMGVIGLKETIFSTPMLLTSLAVIVTLPLLNAMLHPRDAKEVVEIREENSSEDRAAGHGHSMGIENTLAT
RMNNSRLLSLIIGLCGLAYAGLHFSQGGSLDLNLINFLILFIGVLLLGTPANYVAKLNEGIKTISGIILQYPFYAGIMAV
MAGSGLVDSISRVFVDIATPQTLPFWGLVSSFVINFFAPSGGGHWVIQGPFMIDAAKAINSSVAQTSMSVMLGNAWNDLV
QPFWILPALALSKLKLKDVMGYTVIMMFWVGAIYIVAMLAWGAQI

Sequences:

>Translated_445_residues
MSKVAGFFTELMRRYLPDPFVFAIGLTLLTMVMAMLVEGQAAQAVITNWGKGFWNLLSFTTQMAVILAMGYVLATAPLVD
RFLNAIVARVQTPRGAIIVATLVGGIGSYLNWGFGLVIGGIIARKLALKVKGVHYPLIIASAYSGFTMYGLGLSASIPVL
ISTPGHPMEKLMGVIGLKETIFSTPMLLTSLAVIVTLPLLNAMLHPRDAKEVVEIREENSSEDRAAGHGHSMGIENTLAT
RMNNSRLLSLIIGLCGLAYAGLHFSQGGSLDLNLINFLILFIGVLLLGTPANYVAKLNEGIKTISGIILQYPFYAGIMAV
MAGSGLVDSISRVFVDIATPQTLPFWGLVSSFVINFFAPSGGGHWVIQGPFMIDAAKAINSSVAQTSMSVMLGNAWNDLV
QPFWILPALALSKLKLKDVMGYTVIMMFWVGAIYIVAMLAWGAQI
>Mature_444_residues
SKVAGFFTELMRRYLPDPFVFAIGLTLLTMVMAMLVEGQAAQAVITNWGKGFWNLLSFTTQMAVILAMGYVLATAPLVDR
FLNAIVARVQTPRGAIIVATLVGGIGSYLNWGFGLVIGGIIARKLALKVKGVHYPLIIASAYSGFTMYGLGLSASIPVLI
STPGHPMEKLMGVIGLKETIFSTPMLLTSLAVIVTLPLLNAMLHPRDAKEVVEIREENSSEDRAAGHGHSMGIENTLATR
MNNSRLLSLIIGLCGLAYAGLHFSQGGSLDLNLINFLILFIGVLLLGTPANYVAKLNEGIKTISGIILQYPFYAGIMAVM
AGSGLVDSISRVFVDIATPQTLPFWGLVSSFVINFFAPSGGGHWVIQGPFMIDAAKAINSSVAQTSMSVMLGNAWNDLVQ
PFWILPALALSKLKLKDVMGYTVIMMFWVGAIYIVAMLAWGAQI

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=437, Percent_Identity=38.6727688787185, Blast_Score=341, Evalue=6e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47780; Mature: 47648

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVAGFFTELMRRYLPDPFVFAIGLTLLTMVMAMLVEGQAAQAVITNWGKGFWNLLSFT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
TQMAVILAMGYVLATAPLVDRFLNAIVARVQTPRGAIIVATLVGGIGSYLNWGFGLVIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
IIARKLALKVKGVHYPLIIASAYSGFTMYGLGLSASIPVLISTPGHPMEKLMGVIGLKET
HHHHHHHHHHCCCEEHEEEEEHHCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHH
IFSTPMLLTSLAVIVTLPLLNAMLHPRDAKEVVEIREENSSEDRAAGHGHSMGIENTLAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHH
RMNNSRLLSLIIGLCGLAYAGLHFSQGGSLDLNLINFLILFIGVLLLGTPANYVAKLNEG
HCCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IKTISGIILQYPFYAGIMAVMAGSGLVDSISRVFVDIATPQTLPFWGLVSSFVINFFAPS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
GGGHWVIQGPFMIDAAKAINSSVAQTSMSVMLGNAWNDLVQPFWILPALALSKLKLKDVM
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GYTVIMMFWVGAIYIVAMLAWGAQI
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKVAGFFTELMRRYLPDPFVFAIGLTLLTMVMAMLVEGQAAQAVITNWGKGFWNLLSFT
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
TQMAVILAMGYVLATAPLVDRFLNAIVARVQTPRGAIIVATLVGGIGSYLNWGFGLVIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
IIARKLALKVKGVHYPLIIASAYSGFTMYGLGLSASIPVLISTPGHPMEKLMGVIGLKET
HHHHHHHHHHCCCEEHEEEEEHHCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHH
IFSTPMLLTSLAVIVTLPLLNAMLHPRDAKEVVEIREENSSEDRAAGHGHSMGIENTLAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHH
RMNNSRLLSLIIGLCGLAYAGLHFSQGGSLDLNLINFLILFIGVLLLGTPANYVAKLNEG
HCCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IKTISGIILQYPFYAGIMAVMAGSGLVDSISRVFVDIATPQTLPFWGLVSSFVINFFAPS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
GGGHWVIQGPFMIDAAKAINSSVAQTSMSVMLGNAWNDLVQPFWILPALALSKLKLKDVM
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GYTVIMMFWVGAIYIVAMLAWGAQI
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]